FFCP PHASE1:Hg19::chr14:23446003..23446019,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr14:23446003..23446019,- to FFCP PHASE1:Hg19::chr14:23446003..23446019,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=84962 | |EntrezGene=84962 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20250 | |HGNC=20250 | ||
|TSSclassifier=strong | |||
|UniProt=G3V5F5 | |UniProt=G3V5F5 | ||
|association_with_transcript=0bp_to_ENST00000553911_5end | |||
|cluster_id=chr14:23446003..23446019,- | |||
|description=CAGE_peak_10_at_AJUBA_5end | |||
|id=chr14:23446003..23446019,- | |||
|ontology_enrichment_celltype=CL:0000066!4.06e-27!254;CL:0000223!7.07e-13!59;CL:0000220!2.06e-11!246;CL:0002321!4.43e-11!248;CL:0002076!2.23e-10!43;CL:0000548!6.78e-09!679;CL:0000004!6.78e-09!679;CL:0000255!6.78e-09!679;CL:0000012!1.43e-08!682;CL:0002251!3.73e-08!21;CL:0000063!6.82e-07!578 | |||
|ontology_enrichment_celltype_v019=CL:0002368;4.21e-12;13!CL:0002076;6.37e-10;42!CL:0002251;5.98e-08;20!CL:0002202;1.43e-07;9!CL:0002632;1.43e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.89e-18,253;CL:0000223,4.23e-14,58;CL:0002076,5.65e-13,42;CL:0002368,3.54e-12,13;CL:0002251,7.68e-08,20;CL:0002202,1.45e-07,9;CL:0002632,1.45e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000223;7.05e-09;58 | |||
|ontology_enrichment_disease=DOID:305!1.84e-16!106;DOID:0050687!8.02e-16!143;DOID:162!1.53e-09!235;DOID:14566!2.05e-09!239;DOID:7!4.62e-08!39 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,9.84e-09,106 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.52e-14!169;UBERON:0000925!1.52e-14!169;UBERON:0006595!1.52e-14!169;UBERON:0001007!1.61e-13!155;UBERON:0001555!1.61e-13!155;UBERON:0007026!1.61e-13!155;UBERON:0000077!3.16e-11!130;UBERON:0005911!3.65e-11!82;UBERON:0003104!2.07e-10!238;UBERON:0009142!2.07e-10!238;UBERON:0003929!1.16e-09!54;UBERON:0000481!1.78e-09!347;UBERON:0004921!2.72e-09!129;UBERON:0004185!2.72e-09!129;UBERON:0001048!1.63e-08!168;UBERON:0001041!2.70e-08!98;UBERON:0009497!3.24e-07!25;UBERON:0000015!3.24e-07!25;UBERON:0002423!3.24e-07!25;UBERON:0006235!3.24e-07!25;UBERON:0004161!3.24e-07!25;UBERON:0007499!5.01e-07!25;UBERON:0001737!5.11e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002394;5.22e-07;4!UBERON:0003928;5.22e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001041,9.16e-11,87;UBERON:0007499,2.21e-09,25;UBERON:0004119,3.28e-09,160;UBERON:0000925,3.28e-09,160;UBERON:0006595,3.28e-09,160;UBERON:0009856,6.12e-09,26;UBERON:0001007,1.91e-08,145;UBERON:0001555,1.91e-08,145;UBERON:0007026,1.91e-08,145;UBERON:0004921,4.57e-08,118;UBERON:0000065,1.06e-07,54;UBERON:0002394,1.37e-07,6;UBERON:0003928,1.37e-07,6;UBERON:0005177,1.79e-07,101;UBERON:0008835,3.97e-07,22;UBERON:0003894,3.97e-07,22;UBERON:0001048,5.44e-07,160;UBERON:0009854,9.37e-07,23 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,1.72013755551056,1.39560233594486,0,0,0,0,0,0,0,0.975865597581014,0.123121058076788,0,0.313454721478088,0,0,0.251085279189606,0,0,0.0787107813136792,0,0,0,0,0.30120591877825,2.21852406100073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.722878304769133,1.00267582127178,0.289693037921647,0,0,0.283604451492204,0.665188192387692,0.175669571386252,0.0654895377488563,1.45718115317017,0,0,0,0,0,0,0,0.39752481473341,0,0.694281003215189,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,3.05265836499774,1.49091585508596,0.12663051166458,0,0,0,0,1.06748995729705,2.4666754841716,0,0.404132016209064,0,0,0,3.51482147750695,0,0,0,0.469737994575059,0,0,0,0.122834317311768,0,0,0,1.82032272387605,1.43723628363248,0.168336113954066,0.125118519871964,0,0.438977620880838,0.612975591598039,0.300476117813194,0.226864366320042,0.179389635688862,0.213557388818567,0.211931901159562,0,0.103052529238439,0.515281080091258,0.744467425326359,0,0,0,0.276149695926898,0.323292113637624,0,0.201504196455281,0.508681776931463,0.193260853163297,0.545492241181669,0.286804595389004,0,0,0,0,0,0,0,0.643240938192885,0,0,0,1.8929088006375,1.51726221070292,0.723033089650446,1.65440959098591,1.52515610864684,0.237270619111097,0.674156540800822,0.392442930250692,0.38474715694639,0,1.40241773803446,0,0,2.53510069643662,6.87979051674338,0,0,2.58275720940538,0,0.329250856225877,3.37205259772859,0.201057944823262,2.68506490959736,0.977424915930974,0,2.88662684050547,0,0.587043471179108,0.433099343283221,0,0.380508304469197,0,0,0,0,0,0,0,0,0.626909658919938,1.16253575405585,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0.336393253036082,0,0.07333828582095,0.129271715757778,0,0,0.797814349754612,0,0.257207374262142,0,0,0.142977993658148,0.542621605391443,0,0,0.355391948742546,0.791951872933429,0,0,0,0,0,0,1.4377491329495,3.44585807502342,0,0,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08506009479894,0.623912584592421,0.535286966391485,0.630809660135739,0.117141414992713,0.300946099727719,0,1.03473071292505,1.32845119707087,0.553107505625109,0,0,0,0,0,0,0,0,0.604780586659361,0.744323423456331,0.306923946576125,0,0,0.511707249066704,0.64341568457443,0,0,0,0,0,0,0.483437798366489,0.40101294060657,0.460404944679482,0.459257792658427,0,0.131124414959424,2.70719767744447,0.15403067420883,0,0,0.211103257785751,0,0,0,1.54227252690289,0,0,1.01950509218015,1.66215201785745,0.223874754722178,0,0,0.256450125116389,0,2.92840555197873,0.9273691048295,0.457847324091717,0.247528499761764,0.574265537996172,0,0,0.580024309752732,0.154048617114644,0,0,0.537101224341368,0,0.170453254832202,0.356128142586949,1.65284915360978,1.53752053892085,0.127612712494584,1.2138933702666,0,0,0,0.616067160352178,0,0,0.55597265731176,0.429374660225974,0,0,0,0,0,0,0.78494864019923,0,0,0,0,0,0,0,0,0,0,0.282810863907425,0,0,0,1.31535265576129,0,0,0.405820753925408,0.30982349809975,0,0.143411352204052,0.785992328104969,0.7133421029625,0.354761064070598,0.633322905892992,0,0.379473173765715,1.74967360122491,2.30933070541229,0,4.3556393944529,1.03558180854457,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0,0.166849141711909,0,0,0,0,0,0,0.37428108081644,0,0,0,0,0,0,0,0,0,0.556543525114529,0,0.211125408127993,0,0,0,0.102268682502155,0,0.622079175323615,3.23526064130377,3.75944466818779,0,0,0,0,0,0,0,0.260427761085233,0.262379999988587,0,0.1137934482855,1.27126825146383,0,0,0,0,0,0,0,0,0,0,1.63407695278485,0.139423744278603,0,0.569710279235006,0,0.0897576444097721,0.325942115766024,0,0,0,0,0,0,0,0,0,0,0,0,0.326465616318295,0.565412285735763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.60776206594782,0.103688191397247,0.664653872707185,0.330991955875499,1.88359751044335,1.19472429772959,0,0,0,0.979923974143776,0.174118413160805,0,0,0.677294319023596,2.70430473218887,0.492692742319255,0,0.0882561266915003,0,0.959293472527256,0,0,0.195551382734803,0.561111741760736,0.213452994739353,0.19980960958213,1.29681375438695,0,0.171594997861965,0.288109595976299,0.621262677827163,1.41416420770077,0,0,0.407992870545287,0.577901179803038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.551482276150566,0.576911008668165,0.741438982396034,13.6814199305501,0,0,0,0,0,0,0,0,0,0,0,0.209818352539992,0.950403028674658,0.537862017998534,0.959575986597226,0,0,0,0,0,0,0,0,0.170388021785422,0,4.39656701034247,0,0,0,1.71086837884329,0,0.320362237703084,0,0,0.496166021811951,0,0,3.83004754662109,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0.968440444553616,0.124980407962107,0.151649117541648,0,1.17632909849086,0,0,0.149254802886874,0.233713309847224,0,0,0.251567901752575,0,0,0.151230923763239,0,0,0.159296767163702,0,0,0,0,0.521745061811734,0,0,0,0.181848659202559,0.751873899297419,0,0,0,0.686791410365586,0,0,0,1.28664954824955,13.571703182191,1.5869414785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| ||
|short_description=p10@AJUBA | |||
}} | }} |
Latest revision as of 08:26, 19 September 2015
Short description: | p10@AJUBA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_AJUBA_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000553911_5end |
EntrezGene: | AJUBA |
HGNC: | 20250 |
UniProt: | G3V5F5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.89e-18 | 253 |
endodermal cell | 4.23e-14 | 58 |
endo-epithelial cell | 5.65e-13 | 42 |
respiratory epithelial cell | 3.54e-12 | 13 |
epithelial cell of alimentary canal | 7.68e-08 | 20 |
epithelial cell of tracheobronchial tree | 1.45e-07 | 9 |
epithelial cell of lower respiratory tract | 1.45e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
foregut | 9.16e-11 | 87 |
epithelial sac | 2.21e-09 | 25 |
endoderm-derived structure | 3.28e-09 | 160 |
endoderm | 3.28e-09 | 160 |
presumptive endoderm | 3.28e-09 | 160 |
sac | 6.12e-09 | 26 |
digestive system | 1.91e-08 | 145 |
digestive tract | 1.91e-08 | 145 |
primitive gut | 1.91e-08 | 145 |
subdivision of digestive tract | 4.57e-08 | 118 |
respiratory tract | 1.06e-07 | 54 |
bile duct | 1.37e-07 | 6 |
digestive system duct | 1.37e-07 | 6 |
trunk region element | 1.79e-07 | 101 |
hepatic diverticulum | 3.97e-07 | 22 |
liver primordium | 3.97e-07 | 22 |
primordium | 5.44e-07 | 160 |
digestive tract diverticulum | 9.37e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 9.84e-09 | 106 |