FFCP PHASE1:Hg19::chr14:106774551..106774554,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=5663 | |HGNC=5663 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-52bp_to_ENST00000522512_5end | |||
|cluster_id=chr14:106774551..106774554,- | |||
|description=CAGE_peak_1_at_IGHV7-27_5end | |||
|id=chr14:106774551..106774554,- | |||
|ontology_enrichment_celltype=CL:0000236!1.39e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0000236;3.38e-11;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,1.78e-10,14 | |||
|ontology_enrichment_development_v019=UBERON:0001045;5.53e-17;1!UBERON:0006242;1.21e-16;1!UBERON:0008801;2.25e-16;1!UBERON:0005754;2.25e-16;1!UBERON:0006965;3.43e-09;2!UBERON:0007297;7.49e-09;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.98e-22!115;UBERON:0002360!4.47e-13!2;UBERON:0000094!4.47e-13!2;UBERON:0007645!4.47e-13!2;UBERON:0002106!4.73e-09!3;UBERON:0004854!4.73e-09!3;UBERON:0009034!4.73e-09!3;UBERON:0002095!4.73e-09!3;UBERON:0004782!4.73e-09!3;UBERON:0003281!4.73e-09!3;UBERON:0009664!4.73e-09!3;UBERON:0002296!4.73e-09!3;UBERON:0005602!4.73e-09!3;UBERON:0001179!4.73e-09!3;UBERON:0006293!4.73e-09!3;UBERON:0004177!2.63e-08!7;UBERON:0001154!4.57e-08!1;UBERON:0001153!4.57e-08!1;UBERON:0002372!4.89e-08!1;UBERON:0001961!4.89e-08!1;UBERON:0001744!4.89e-08!1;UBERON:0001735!4.89e-08!1;UBERON:0002171!6.80e-08!1;UBERON:0006518!6.80e-08!1;UBERON:0008949!6.80e-08!1;UBERON:0000101!6.80e-08!1;UBERON:0002167!6.80e-08!1;UBERON:0000998!8.28e-08!1;UBERON:0006868!8.28e-08!1;UBERON:0001831!8.84e-08!1;UBERON:0001567!8.84e-08!1;UBERON:0008801!8.84e-08!1;UBERON:0002581!2.63e-07!1;UBERON:0002363!2.80e-07!1;UBERON:0007647!2.80e-07!1;UBERON:0010115!2.80e-07!1;UBERON:0004921!9.79e-07!129;UBERON:0004185!9.79e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0001154;5.53e-17;1!UBERON:0001153;5.53e-17;1!UBERON:0009854;5.53e-17;1!UBERON:0002372;6.47e-17;1!UBERON:0001961;6.47e-17;1!UBERON:0001744;6.47e-17;1!UBERON:0001042;6.47e-17;1!UBERON:0001735;6.47e-17;1!UBERON:0002171;1.21e-16;1!UBERON:0006518;1.21e-16;1!UBERON:0008949;1.21e-16;1!UBERON:0000101;1.21e-16;1!UBERON:0002167;1.21e-16;1!UBERON:0001831;2.25e-16;1!UBERON:0000998;2.25e-16;1!UBERON:0006868;2.25e-16;1!UBERON:0001567;2.25e-16;1!UBERON:0004921;3.24e-10;33!UBERON:0006562;4.02e-09;2!UBERON:0003127;7.49e-09;2!UBERON:0001829;7.49e-09;2!UBERON:0004089;7.49e-09;2!UBERON:0000160;2.68e-08;17!UBERON:0001155;9.20e-08;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001154,5.53e-17,1;UBERON:0001153,5.53e-17,1;UBERON:0001045,5.53e-17,1;UBERON:0002372,6.47e-17,1;UBERON:0001961,6.47e-17,1;UBERON:0001744,6.47e-17,1;UBERON:0001735,6.47e-17,1;UBERON:0002171,1.41e-16,1;UBERON:0006518,1.41e-16,1;UBERON:0008949,1.41e-16,1;UBERON:0000101,1.41e-16,1;UBERON:0002167,1.41e-16,1;UBERON:0000998,2.25e-16,1;UBERON:0006868,2.25e-16,1;UBERON:0001831,2.63e-16,1;UBERON:0001567,2.63e-16,1;UBERON:0008801,2.63e-16,1;UBERON:0007023,1.74e-12,114;UBERON:0003127,6.94e-09,2;UBERON:0001829,8.09e-09,2;UBERON:0004089,8.09e-09,2;UBERON:0000160,2.85e-08,17;UBERON:0001155,9.85e-08,9 | |||
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|short_description=p1@IGHV7-27 | |||
}} | }} |
Latest revision as of 22:31, 18 September 2015
Short description: | p1@IGHV7-27 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_IGHV7-27_5end |
Coexpression cluster: | NA |
Association with transcript: | -52bp_to_ENST00000522512_5end |
EntrezGene: | NA |
HGNC: | 5663 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 1.78e-10 | 14 |
Ontology term | p-value | n |
---|---|---|
vermiform appendix | 5.53e-17 | 1 |
caecum | 5.53e-17 | 1 |
midgut | 5.53e-17 | 1 |
tonsil | 6.47e-17 | 1 |
mucosa-associated lymphoid tissue | 6.47e-17 | 1 |
lymphoid tissue | 6.47e-17 | 1 |
tonsillar ring | 6.47e-17 | 1 |
lower lobe of right lung | 1.41e-16 | 1 |
right lung lobe | 1.41e-16 | 1 |
lower lobe of lung | 1.41e-16 | 1 |
lobe of lung | 1.41e-16 | 1 |
right lung | 1.41e-16 | 1 |
seminal vesicle | 2.25e-16 | 1 |
seminal fluid secreting gland | 2.25e-16 | 1 |
parotid gland | 2.63e-16 | 1 |
cheek | 2.63e-16 | 1 |
parotid gland primordium | 2.63e-16 | 1 |
adult organism | 1.74e-12 | 114 |
open tracheal system trachea | 6.94e-09 | 2 |
major salivary gland | 8.09e-09 | 2 |
midface | 8.09e-09 | 2 |
intestine | 2.85e-08 | 17 |
colon | 9.85e-08 | 9 |