FFCP PHASE1:Hg19::chr13:95248489..95248510,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr13:95248489..95248510,- to FFCP PHASE1:Hg19::chr13:95248489..95248510,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23483 | |EntrezGene=23483 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20324 | |HGNC=20324 | ||
|TSSclassifier=strong | |||
|UniProt=O95455,Q05DQ3,Q2TU31 | |UniProt=O95455,Q05DQ3,Q2TU31 | ||
|association_with_transcript=0bp_to_ENST00000261296,ENST00000498294,NM_014305,uc001vlw.2,uc001vlx.2_5end | |||
|cluster_id=chr13:95248489..95248510,- | |||
|description=CAGE_peak_3_at_TGDS_5end | |||
|id=chr13:95248489..95248510,- | |||
|ontology_enrichment_celltype=CL:0000945!2.99e-07!24;CL:0000826!2.99e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0000945;4.57e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,2.03e-07,24;CL:0000826,2.03e-07,24 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!6.97e-18!235;DOID:14566!8.46e-18!239;DOID:0050686!2.70e-10!137;DOID:0050687!2.28e-08!143;DOID:2531!1.87e-07!51;DOID:0060083!1.87e-07!51;DOID:305!6.08e-07!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:14566,7.75e-18,239;DOID:162,8.01e-18,235;DOID:0050686,2.99e-10,137;DOID:0050687,2.36e-08,143;DOID:2531,1.48e-07,51;DOID:0060083,1.48e-07,51;DOID:305,6.48e-07,106 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p3@TGDS | |||
}} | }} |
Latest revision as of 05:33, 18 September 2015
Short description: | p3@TGDS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TGDS_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000261296, ENST00000498294, NM_014305, uc001vlw.2, uc001vlx.2_5end |
EntrezGene: | TGDS |
HGNC: | 20324 |
UniProt: | O95455Q05DQ3Q2TU31 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 2.03e-07 | 24 |
pro-B cell | 2.03e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 7.75e-18 | 239 |
cancer | 8.01e-18 | 235 |
organ system cancer | 2.99e-10 | 137 |
cell type cancer | 2.36e-08 | 143 |
hematologic cancer | 1.48e-07 | 51 |
immune system cancer | 1.48e-07 | 51 |
carcinoma | 6.48e-07 | 106 |