FFCP PHASE1:Hg19::chr13:75884283..75884317,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr13:75884283..75884317,- to FFCP PHASE1:Hg19::chr13:75884283..75884317,-: NSchange) |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr13:75884283..75884317,- | |||
|coexpression_cluster_id=C61 | |||
|description=CAGE_peak_at_chr13:75884283..75884317,- | |||
|id=chr13:75884283..75884317,- | |||
|ontology_enrichment_celltype=CL:0000990!5.32e-25!8;CL:0000451!4.53e-20!10;CL:0000840!4.89e-17!5;CL:0001029!4.89e-17!5;CL:0000453!5.35e-15!5;CL:0001014!5.32e-07!2;CL:0001016!5.32e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000990;1.90e-139;8!CL:0000451;3.99e-114;10!CL:0000453;2.30e-99;5!CL:0000840;8.36e-82;5!CL:0001014;7.33e-41;2!CL:0001016;7.33e-41;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000990,1.90e-139,8;CL:0000451,3.99e-114,10;CL:0000453,2.30e-99,5;CL:0000840,8.36e-82,5;CL:0001029,8.36e-82,5;CL:0001014,7.33e-41,2;CL:0001016,7.33e-41,2;CL:0000763,2.45e-11,108;CL:0000049,2.45e-11,108;CL:0000738,6.18e-09,136;CL:0002009,4.15e-08,61;CL:0002032,1.75e-07,161;CL:0000837,1.75e-07,161;CL:0000557,2.14e-07,67;CL:0000037,3.74e-07,168;CL:0000988,9.13e-07,177 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!1.26e-09!7;UBERON:0002106!1.53e-08!3;UBERON:0004854!1.53e-08!3;UBERON:0009034!1.53e-08!3;UBERON:0002095!1.53e-08!3;UBERON:0004782!1.53e-08!3;UBERON:0003281!1.53e-08!3;UBERON:0009664!1.53e-08!3;UBERON:0002296!1.53e-08!3;UBERON:0005602!1.53e-08!3;UBERON:0001179!1.53e-08!3;UBERON:0006293!1.53e-08!3;UBERON:0000945!4.13e-08!8;UBERON:0010039!4.13e-08!8;UBERON:0002405!5.64e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0004177;1.12e-16;5!UBERON:0005057;1.12e-16;5!UBERON:0002370;4.52e-11;2!UBERON:0005058;4.52e-11;2!UBERON:0009113;4.52e-11;2!UBERON:0002106;6.34e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,3.34e-12,7;UBERON:0005057,3.34e-12,7;UBERON:0002405,4.57e-10,93;UBERON:0002390,1.52e-09,98;UBERON:0003061,1.52e-09,98;UBERON:0002193,1.22e-08,108;UBERON:0002106,6.34e-08,3;UBERON:0004854,6.34e-08,3;UBERON:0009034,6.34e-08,3;UBERON:0002095,6.34e-08,3;UBERON:0004782,6.34e-08,3;UBERON:0003281,6.34e-08,3;UBERON:0009664,6.34e-08,3;UBERON:0002296,6.34e-08,3;UBERON:0005602,6.34e-08,3;UBERON:0001179,6.34e-08,3;UBERON:0006293,6.34e-08,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,0,0,0,0,0,0,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0.236482229888585,0,0,0,0,0,0.449446968890169,0,0,0.639337125799041,0,0,0,0,0,0.622822248995575,0,0,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.473447805734733,0,0,0,0.664601683750863,0,0.384273959177026,0.130059347559878,0,0,0.289803085735052,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0.255973222308837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,12.9818957461873,10.7960437125546,8.7752253942451,0.238490624305342,0,0,0,0,0.347140501607594,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280660094433074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0.0890320356467374,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.552567831062295,0,0,0.984678443688556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291604613383254,0,0,0,0,0.110579259931225,0,0,0,0,0,0,0,0.0897576444097721,0,0,0,0,0,0,0.166211681900156,0,0,0,0,0,0,0,0.565412285735763,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0.195551382734803,0,0,0.19980960958213,0,0,0,0.14405479798815,0,0,0,0,0,0,0,0,0,0,0.525774708558629,0,0,0,0,0,0,0,0,0,0.157566364614447,0,0.0674035438541849,0,0,0,0,0,0,0,526.438906230511,92.082432592396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0.213574825135389,0,0.414239055347196,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,525.538252939831,438.719702714725,259.741846078281,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0.206686796501184,0,0,0,0,0.175871244359621,0,0,0.336283722218824,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0.0771741581079447,0,0,0,0,0,0,0,0,0.0939839179798536,0.322289439867886,13.7918795176402,0,0,0,0.730336388246517,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,1.0980114672121,0.682821857254437,0,0,0.202117188958219,0.435433495793923,0,0.606168477131288,0,0,0,0,0,0,0,0,0,0,0,0.320568492303233 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,0,0,0,0,0,0,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0.236482229888585,0,0,0,0,0,0.449446968890169,0,0,0.639337125799041,0,0,0,0,0,0.622822248995575,0,0,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.473447805734733,0,0,0,0.664601683750863,0,0.384273959177026,0.130059347559878,0,0,0.289803085735052,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0.255973222308837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,12.9818957461873,10.7960437125546,8.7752253942451,0.238490624305342,0,0,0,0,0.347140501607594,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280660094433074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0.0890320356467374,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.552567831062295,0,0,0.984678443688556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291604613383254,0,0,0,0,0.110579259931225,0,0,0,0,0,0,0,0.0897576444097721,0,0,0,0,0,0,0.166211681900156,0,0,0,0,0,0,0,0.565412285735763,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0.195551382734803,0,0,0.19980960958213,0,0,0,0.14405479798815,0,0,0,0,0,0,0,0,0,0,0.525774708558629,0,0,0,0,0,0,0,0,0,0.157566364614447,0,0.0674035438541849,0,0,0,0,0,0,0,526.438906230511,92.082432592396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0.213574825135389,0,0.414239055347196,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,525.538252939831,438.719702714725,259.741846078281,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0.206686796501184,0,0,0,0,0.175871244359621,0,0,0.336283722218824,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0.0771741581079447,0,0,0,0,0,0,0,0,0.0939839179798536,0.322289439867886,13.7918795176402,0,0,0,0.730336388246517,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,1.0980114672121,0.682821857254437,0,0,0.202117188958219,0.435433495793923,0,0.606168477131288,0,0,0,0,0,0,0,0,0,0,0,0.320568492303233 | ||
|short_description=p@chr13:75884283..75884317,- | |||
}} | }} |
Latest revision as of 17:04, 24 July 2015
Short description: | p@chr13:75884283..75884317, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:75884283..75884317, - |
Coexpression cluster: | C61_migratory_Dendritic_immature_Macrophage_xeroderma_cord_b |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
conventional dendritic cell | 1.90e-139 | 8 |
dendritic cell | 3.99e-114 | 10 |
Langerhans cell | 2.30e-99 | 5 |
immature conventional dendritic cell | 8.36e-82 | 5 |
common dendritic progenitor | 8.36e-82 | 5 |
CD1a-positive Langerhans cell | 7.33e-41 | 2 |
immature CD1a-positive Langerhans cell | 7.33e-41 | 2 |
myeloid cell | 2.45e-11 | 108 |
common myeloid progenitor | 2.45e-11 | 108 |
leukocyte | 6.18e-09 | 136 |
macrophage dendritic cell progenitor | 4.15e-08 | 61 |
hematopoietic oligopotent progenitor cell | 1.75e-07 | 161 |
hematopoietic multipotent progenitor cell | 1.75e-07 | 161 |
granulocyte monocyte progenitor cell | 2.14e-07 | 67 |
hematopoietic stem cell | 3.74e-07 | 168 |
hematopoietic cell | 9.13e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
hemopoietic organ | 3.34e-12 | 7 |
immune organ | 3.34e-12 | 7 |
immune system | 4.57e-10 | 93 |
hematopoietic system | 1.52e-09 | 98 |
blood island | 1.52e-09 | 98 |
hemolymphoid system | 1.22e-08 | 108 |
spleen | 6.34e-08 | 3 |
gastrointestinal system mesentery | 6.34e-08 | 3 |
stomach region | 6.34e-08 | 3 |
mesentery | 6.34e-08 | 3 |
gastrointestinal system serosa | 6.34e-08 | 3 |
mesentery of stomach | 6.34e-08 | 3 |
gut mesentery | 6.34e-08 | 3 |
dorsal mesentery | 6.34e-08 | 3 |
dorsal mesogastrium | 6.34e-08 | 3 |
peritoneal cavity | 6.34e-08 | 3 |
spleen primordium | 6.34e-08 | 3 |