FFCP PHASE1:Hg19::chr13:39261224..39261248,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr13:39261224..39261248,+ to FFCP PHASE1:Hg19::chr13:39261224..39261248,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=341640 | |EntrezGene=341640 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25396 | |HGNC=25396 | ||
|TSSclassifier=strong | |||
|UniProt=Q5SZK8 | |UniProt=Q5SZK8 | ||
|association_with_transcript=-17bp_to_ENST00000280481_5end | |||
|cluster_id=chr13:39261224..39261248,+ | |||
|description=CAGE_peak_3_at_FREM2_5end | |||
|id=chr13:39261224..39261248,+ | |||
|ontology_enrichment_celltype=CL:0000047!1.77e-10!8;CL:0000540!4.60e-08!6;CL:0000031!4.60e-08!6;CL:0000404!4.60e-08!6;CL:0002319!5.70e-08!25;CL:0002322!6.33e-08!5 | |||
|ontology_enrichment_celltype_v019=CL:0002322;8.55e-19;5!CL:0002253;8.97e-09;2!CL:0000047;2.16e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,6.40e-19,5;CL:0000047,6.84e-12,8;CL:0002253,1.11e-08,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3119;5.12e-09;14!DOID:5093;1.06e-08;4!DOID:1612;1.06e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:3119,5.20e-09,14;DOID:5093,1.19e-08,4;DOID:1612,1.19e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0001017!4.74e-15!82;UBERON:0005743!1.17e-14!86;UBERON:0000073!1.22e-13!94;UBERON:0001016!1.22e-13!94;UBERON:0001893!3.11e-13!34;UBERON:0001869!3.21e-13!32;UBERON:0007023!4.68e-13!115;UBERON:0002791!1.27e-12!33;UBERON:0002020!4.10e-12!34;UBERON:0003528!4.10e-12!34;UBERON:0002780!6.46e-12!41;UBERON:0001890!6.46e-12!41;UBERON:0006240!6.46e-12!41;UBERON:0003080!1.84e-11!42;UBERON:0000956!6.38e-11!25;UBERON:0000203!6.38e-11!25;UBERON:0001049!1.44e-10!57;UBERON:0005068!1.44e-10!57;UBERON:0006241!1.44e-10!57;UBERON:0007135!1.44e-10!57;UBERON:0000955!1.95e-09!69;UBERON:0006238!1.95e-09!69;UBERON:0002619!4.89e-09!22;UBERON:0002616!6.11e-09!59;UBERON:0001950!8.79e-09!20;UBERON:0003056!8.33e-08!61;UBERON:0000924!1.01e-07!173;UBERON:0006601!1.01e-07!173;UBERON:0002346!1.99e-07!90;UBERON:0004121!7.20e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0000922;4.45e-15;49!UBERON:0001052;3.40e-09;4!UBERON:0004907;1.98e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001052,3.60e-09,4;UBERON:0004907,2.07e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0.136874425072884,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0.217010870715852,0,0,0,0,0.377875943688809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0.263504357079378,0.589405839739707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,0,0,0,1.95157929807353,3.44577397635862,3.48581828608555,3.10983165046111,3.02785021050754,4.37972830890996,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0.614942192715568,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,2.37061319387782,1.71697232418975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.791951872933429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.03275699377971,2.60279707715243,0.773288812777695,0.167516265334349,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.50492403815704,0.200506470303285,0,0,0,0,0,0,0.784349769176855,0,0.211103257785751,0,0,0.431831832204279,0,0,0,0.254876273045038,0,0.447749509444357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0.343505344755765,0,0,0,0,0,0,0.270455678475983,0,0,0,0.146508179271894,0,0,0,0,0.296964680832639,0,0,0.140669416410513,0.111308705022906,0,0.211125408127993,0.19924798825107,0,0.755798243562828,0.306806047506464,0,0,0,0,0,0,0,0,0,0.371072392647405,1.99613798001194,2.3438498497671,0,0,0,0.508507300585533,0,2.41320361269025,0.291604613383254,0,0.885741385813839,0.361789315876224,0,0,0.591095237907095,0,0,0.697118721393016,0.230850775511391,0,1.84451123510448,0,3.36806852958225,0.31900115973192,0.0915975934018623,0,0,0,0,0,0,0,0,0,0.421996129056054,0.163232808159148,2.26164914294305,7.14082511148901,0,0.0884575645033392,0,1.18608451472249,0.123563938946503,0.522109747527277,0.202203398942031,0,0.234264445725339,0,0.19566461893209,0,0,0,0.91821828489147,0.063186579628488,2.55549813004637,0.414752765588989,0,0.330991955875499,0,0,0,0,0.347119476670262,0,0,0.17472666824203,0,0,0,0,0,0,0.451961481561065,0,0,0.633107959558787,0,0,0,0,1.87317542300338,0.229073192331831,1.37275998289572,0,0.124252535565433,0,0,0,0,0,0,0.136905378891993,0,0,2.36598618851383,0,0,0,1.39775300349294,0,0,0.268733889946905,0,1.16495949527454,0,0,0,0,0,0,0.817220436669454,4.34033500855552,4.81388028090318,4.56984371832104,0,0,0.607495566580247,0,0.551639951094387,4.19636705079985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0,0,0,0.213574825135389,1.72924735609633,1.24271716604159,0,0.197611631897944,0,0,0,0,0,0,1.57054096250234,0,0.244052529803926,0.1251909307065,0,0,0.0620964029413835,15.4950471128579,0,0,0,0,0.468334905806882,0.579684114443301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,2.59983614611409,0,0,0,0,0,0,0,0,0.786329709279482,0,0.33946505990805,0,0.123935764259002,0,0,0,0,0,0,0.385375350578757,0,0.159633859057151,1.8460472781668,1.26035848110859,0.484100767249525,0.161475645631851,0,0,0,0,0,0,0,0,0.376051641746286,0,0.781514011233092,6.28576066755414,0,0,0.202612753855184,0,0.413373593002368,0.317079050969534,0,0,0.496211178389294,0.703484977438482,0.255524855279191,0,0,0,0,0.354809480650555,0,0,0.0679697329768317,0.394636641377094,0,0,0.235479278551542,0,0,2.73947616152849,0,0,0.357382720883282,0,0,0.173858272302579,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0.223710863595585,0,0,1.94228651156368,0.615976841137482,1.1598144313382,1.94284397223656,5.84848658655264,18.90032364033,0.713520544665411,1.24240690242856,0,0,0.0771741581079447,1.09279780251979,0,0,0,0,0,2.5359343655004,0,0,0.773494655682926,0,0.178553938605658,0,0,0,0,0,0,0.475940431336403,0,3.1741610430924,0,0,0,2.90182777120682,0.874124575709564,2.91406552326305,1.01988829741982,0.801652215796681,0.827054095813604,0,0.530450887527676,1.33982065078089,0,0.310298987585686,0.213233981900981,4.28515976634733,0,0.124149428591716,0,1.20929600728513,6.06351566874658,0.435433495793923,1.71116650542641,0.0673520530145875,0.215166616178029,0,0.0814032686109745,0,0,0,0,0.366724332548599,2.84827324821017,0,0,0 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| ||
|short_description=p3@FREM2 | |||
}} | }} |
Latest revision as of 07:25, 17 September 2015
Short description: | p3@FREM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_FREM2_5end |
Coexpression cluster: | NA |
Association with transcript: | -17bp_to_ENST00000280481_5end |
EntrezGene: | FREM2 |
HGNC: | 25396 |
UniProt: | Q5SZK8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 6.40e-19 | 5 |
neuronal stem cell | 6.84e-12 | 8 |
epithelial cell of large intestine | 1.11e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
rectum | 3.60e-09 | 4 |
lower digestive tract | 2.07e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system cancer | 5.20e-09 | 14 |
thoracic cancer | 1.19e-08 | 4 |
breast cancer | 1.19e-08 | 4 |