FFCP PHASE1:Hg19::chr13:109148029..109148041,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr13:109148029..109148041,+ to FFCP PHASE1:Hg19::chr13:109148029..109148041,+: NSchange) |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr13:109148029..109148041,+ | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_at_chr13:109148029..109148041,+ | |||
|id=chr13:109148029..109148041,+ | |||
|ontology_enrichment_celltype=CL:0000128!1.43e-07!7;CL:0000126!1.43e-07!7;CL:0000127!1.43e-07!7;CL:0002453!1.43e-07!7;CL:0002605!2.06e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002567;3.88e-12;3!CL:0002566;1.68e-09;1!CL:0000148;5.00e-08;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0002567,3.37e-12,3;CL:0002566,2.67e-09,1;CL:0000148,5.38e-08,10;CL:0000541,5.38e-08,10 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:8692;1.78e-12;31!DOID:8552;7.82e-10;1!DOID:9119;1.68e-09;1!DOID:1240;1.52e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,2.35e-12,31;DOID:8552,8.91e-10,1;DOID:1240,1.15e-09,39;DOID:9119,1.48e-09,1;DOID:2531,3.27e-07,51;DOID:0060083,3.27e-07,51 | |||
|ontology_enrichment_uberon=UBERON:0000956!2.99e-30!25;UBERON:0000203!2.99e-30!25;UBERON:0001049!3.19e-30!57;UBERON:0005068!3.19e-30!57;UBERON:0006241!3.19e-30!57;UBERON:0007135!3.19e-30!57;UBERON:0001017!3.71e-29!82;UBERON:0002020!5.03e-28!34;UBERON:0003528!5.03e-28!34;UBERON:0001869!9.47e-28!32;UBERON:0005743!2.58e-27!86;UBERON:0000073!5.28e-27!94;UBERON:0001016!5.28e-27!94;UBERON:0002616!7.07e-27!59;UBERON:0000955!2.19e-26!69;UBERON:0006238!2.19e-26!69;UBERON:0001893!8.73e-26!34;UBERON:0002619!8.38e-25!22;UBERON:0002780!1.60e-24!41;UBERON:0001890!1.60e-24!41;UBERON:0006240!1.60e-24!41;UBERON:0002791!3.55e-24!33;UBERON:0003080!8.75e-24!42;UBERON:0002346!1.22e-22!90;UBERON:0001950!4.46e-21!20;UBERON:0003075!5.57e-21!86;UBERON:0007284!5.57e-21!86;UBERON:0003056!3.56e-17!61;UBERON:0000924!8.41e-16!173;UBERON:0006601!8.41e-16!173;UBERON:0007023!7.18e-15!115;UBERON:0000033!1.18e-14!123;UBERON:0004121!1.65e-14!169;UBERON:0000153!1.59e-13!129;UBERON:0007811!1.59e-13!129;UBERON:0000349!6.02e-12!5;UBERON:0001871!4.33e-10!7;UBERON:0003076!1.29e-07!15;UBERON:0003057!1.29e-07!15;UBERON:0004733!1.45e-07!12;UBERON:0002028!1.45e-07!12;UBERON:0007277!1.45e-07!12;UBERON:0001872!1.75e-07!5;UBERON:0004732!6.67e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0000956;4.44e-08;25!UBERON:0000203;4.44e-08;25!UBERON:0001950;9.01e-07;20!UBERON:0000922;9.46e-07;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000956,4.28e-08,25;UBERON:0000203,4.28e-08,25;UBERON:0001950,8.62e-07,20 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369363174230364,0,0,1.43117993565528,0.136874425072884,0.627713197974014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790152254325231,0.196709770113833,0.786021525498329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34362744548263,0.506039384039006,0,0,0,0.451725357233318,0,0,0,0,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0.207328115540772,0,0,1.0159663086747,0,3.51652341630141,1.71072446022705,0,0,0.285826432630578,0,0.87192013766656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.28685161800217,0,0.773288812777695,0.837581326671744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.64825036673018,2.22775649785588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0,1.9488432172667,1.23087398947712,0,1.6653598399891,5.63948020351398,0,0,0,0,0,0,0,0,2.98244294329889,0.703347082052564,0,0,0,0.19924798825107,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0.0927680981618513,1.99613798001194,0,0,0,0,0,0,0,0,0,0,0,0,0,0.591095237907095,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,2.16075186470203,0,0.588187602953219,0,1.3282761290693,2.06617552674492,0,0,0,0,0,0,0,0,0,0.104421949505455,0,0,0,0,0,0,0,0,6.1214552326098,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0.379864775735272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0.795229689809303,0.681017030557878,0,0,0,0,0,0.303747783290123,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0.164185041498678,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0.106787412567695,0.78602152549833,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0.244052529803926,0.250381861413,0.573409195690071,0,0.18628920882415,0,0,0,1.7127920012698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02315497042921,0,0,0,0,0.212574920101683,2.35477952092104,0.558644917973244,0,0,0,0,0,0.449604575675217,0,0,0.41023272848151,13.1077282035293,0.484100767249525,0,0,0,0,0,0,0,0,0.397832444232549,0,0,0,0,0,0,0.405225507710368,0,0.413373593002368,0.19024743058172,8.75159694429151,0,0,0,0,0,0.336283722218824,0,0,0,0,0,0.0679697329768317,0.394636641377094,0,0,0.235479278551542,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,1.1598144313382,0,0,0,0,0,0,0,0,0,0,0,0,0,0.297046400327086,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0.611923411718232,8.29066311646717,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0.267964130156178,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0.134704106029175,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369363174230364,0,0,1.43117993565528,0.136874425072884,0.627713197974014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790152254325231,0.196709770113833,0.786021525498329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34362744548263,0.506039384039006,0,0,0,0.451725357233318,0,0,0,0,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0.207328115540772,0,0,1.0159663086747,0,3.51652341630141,1.71072446022705,0,0,0.285826432630578,0,0.87192013766656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.28685161800217,0,0.773288812777695,0.837581326671744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.64825036673018,2.22775649785588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0,1.9488432172667,1.23087398947712,0,1.6653598399891,5.63948020351398,0,0,0,0,0,0,0,0,2.98244294329889,0.703347082052564,0,0,0,0.19924798825107,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0.0927680981618513,1.99613798001194,0,0,0,0,0,0,0,0,0,0,0,0,0,0.591095237907095,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,2.16075186470203,0,0.588187602953219,0,1.3282761290693,2.06617552674492,0,0,0,0,0,0,0,0,0,0.104421949505455,0,0,0,0,0,0,0,0,6.1214552326098,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0.379864775735272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0.795229689809303,0.681017030557878,0,0,0,0,0,0.303747783290123,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0.164185041498678,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0.106787412567695,0.78602152549833,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0.244052529803926,0.250381861413,0.573409195690071,0,0.18628920882415,0,0,0,1.7127920012698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02315497042921,0,0,0,0,0.212574920101683,2.35477952092104,0.558644917973244,0,0,0,0,0,0.449604575675217,0,0,0.41023272848151,13.1077282035293,0.484100767249525,0,0,0,0,0,0,0,0,0.397832444232549,0,0,0,0,0,0,0.405225507710368,0,0.413373593002368,0.19024743058172,8.75159694429151,0,0,0,0,0,0.336283722218824,0,0,0,0,0,0.0679697329768317,0.394636641377094,0,0,0.235479278551542,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,1.1598144313382,0,0,0,0,0,0,0,0,0,0,0,0,0,0.297046400327086,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0.611923411718232,8.29066311646717,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0.267964130156178,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0.134704106029175,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr13:109148029..109148041,+ | |||
}} | }} |
Latest revision as of 14:25, 24 July 2015
Short description: | p@chr13:109148029..109148041, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:109148029..109148041, + |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
light melanocyte | 3.37e-12 | 3 |
dark melanocyte | 2.67e-09 | 1 |
melanocyte | 5.38e-08 | 10 |
melanoblast | 5.38e-08 | 10 |
Ontology term | p-value | n |
---|---|---|
cerebral cortex | 4.28e-08 | 25 |
pallium | 4.28e-08 | 25 |
neocortex | 8.62e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 2.35e-12 | 31 |
chronic myeloid leukemia | 8.91e-10 | 1 |
leukemia | 1.15e-09 | 39 |
acute myeloid leukemia | 1.48e-09 | 1 |
hematologic cancer | 3.27e-07 | 51 |
immune system cancer | 3.27e-07 | 51 |