FFCP PHASE1:Hg19::chr12:99038511..99038575,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:99038511..99038575,- to FFCP PHASE1:Hg19::chr12:99038511..99038575,-: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=121457 | |EntrezGene=121457 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26430 | |HGNC=26430 | ||
|TSSclassifier=strong | |||
|UniProt=Q70UQ0 | |UniProt=Q70UQ0 | ||
|association_with_transcript=13bp_to_NM_153687,NM_201612,NM_201613,uc001tfv.2,uc001tfw.2,uc001tfx.2_5end | |||
|cluster_id=chr12:99038511..99038575,- | |||
|coexpression_cluster_id=C811 | |||
|description=CAGE_peak_1_at_IKBIP_5end | |||
|id=chr12:99038511..99038575,- | |||
|ontology_enrichment_celltype=CL:0000055!8.57e-34!180;CL:0000548!4.10e-28!679;CL:0000004!4.10e-28!679;CL:0000255!4.10e-28!679;CL:0000012!1.41e-27!682;CL:0000144!9.62e-27!625;CL:0002371!3.47e-24!591;CL:0000003!5.93e-21!722;CL:0000057!1.85e-19!75;CL:0000048!9.26e-18!430;CL:0000222!1.28e-17!119;CL:0000723!2.46e-17!436;CL:0000680!1.03e-16!57;CL:0000056!1.03e-16!57;CL:0000355!1.03e-16!57;CL:0000034!4.10e-16!444;CL:0000187!3.41e-15!54;CL:0000220!9.20e-14!246;CL:0000192!1.44e-13!42;CL:0000514!1.44e-13!42;CL:0002321!2.94e-13!248;CL:0000183!2.67e-12!59;CL:0000393!3.08e-12!60;CL:0000211!3.08e-12!60;CL:0000359!4.57e-12!32;CL:0002620!1.28e-09!23;CL:0000063!5.72e-09!578;CL:0002334!6.67e-08!12;CL:0000134!8.66e-07!358 | |||
|ontology_enrichment_celltype_v019=CL:0000359;2.20e-11;32!CL:0002620;1.27e-09;23!CL:0000192;2.00e-09;43!CL:0000187;9.43e-09;55!CL:0002334;6.62e-08;12!CL:0000057;8.70e-08;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,5.34e-20,76;CL:0000222,2.63e-17,121;CL:0000048,3.23e-17,427;CL:0000723,8.49e-17,433;CL:0000680,2.59e-16,58;CL:0000056,2.59e-16,58;CL:0000355,2.59e-16,58;CL:0000034,1.36e-15,441;CL:0000187,8.26e-15,55;CL:0000192,3.83e-13,43;CL:0000514,3.83e-13,43;CL:0002321,3.84e-13,250;CL:0000359,4.57e-12,32;CL:0000393,6.03e-12,61;CL:0000211,6.03e-12,61;CL:0002620,1.28e-09,23;CL:0002334,6.67e-08,12 | |||
|ontology_enrichment_development_v019=CL:0000514;2.00e-09;43!CL:0000355;1.51e-08;58 | |||
|ontology_enrichment_disease=DOID:2394!2.90e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;2.93e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,2.90e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!5.34e-18!83;UBERON:0002329!5.34e-18!83;UBERON:0003077!5.34e-18!83;UBERON:0003059!5.34e-18!83;UBERON:0007282!5.34e-18!83;UBERON:0009618!5.34e-18!83;UBERON:0007285!5.34e-18!83;UBERON:0000486!2.50e-15!82;UBERON:0004290!3.10e-15!70;UBERON:0004535!8.17e-15!110;UBERON:0001134!5.16e-14!61;UBERON:0002036!5.16e-14!61;UBERON:0003082!5.16e-14!61;UBERON:0001009!1.13e-13!113;UBERON:0004872!1.23e-12!84;UBERON:0002385!1.32e-12!63;UBERON:0001015!1.32e-12!63;UBERON:0000383!1.32e-12!63;UBERON:0001637!4.17e-12!42;UBERON:0003509!4.17e-12!42;UBERON:0004572!4.17e-12!42;UBERON:0002049!5.07e-12!79;UBERON:0007798!5.07e-12!79;UBERON:0001981!2.39e-11!60;UBERON:0007500!2.39e-11!60;UBERON:0004537!2.39e-11!60;UBERON:0006965!2.39e-11!60;UBERON:0000055!5.63e-11!69;UBERON:0004573!9.23e-11!33;UBERON:0004571!9.23e-11!33;UBERON:0000490!1.64e-10!138;UBERON:0005256!3.34e-09!143;UBERON:0002100!1.09e-08!216;UBERON:0002199!2.42e-08!45;UBERON:0002416!2.42e-08!45;UBERON:0002384!1.36e-07!375;UBERON:0003102!1.51e-07!95;UBERON:0002097!5.14e-07!40;UBERON:0000926!5.61e-07!448;UBERON:0004120!5.61e-07!448;UBERON:0006603!5.61e-07!448;UBERON:0000947!9.48e-07!21;UBERON:0010191!9.48e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;6.79e-10;33!UBERON:0004571;6.79e-10;33!UBERON:0001637;5.48e-09;42!UBERON:0003509;5.48e-09;42!UBERON:0004572;5.48e-09;42!UBERON:0007500;8.57e-07;56!UBERON:0001981;8.57e-07;56!UBERON:0004537;8.57e-07;56!UBERON:0000947;9.54e-07;21!UBERON:0010191;9.54e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000486,4.73e-15,83;UBERON:0002329,6.37e-15,71;UBERON:0003059,6.37e-15,71;UBERON:0007282,6.37e-15,71;UBERON:0004290,6.37e-15,71;UBERON:0009618,6.37e-15,71;UBERON:0007524,1.57e-14,73;UBERON:0004535,2.26e-14,109;UBERON:0003077,4.41e-14,72;UBERON:0007285,4.41e-14,72;UBERON:0001134,1.09e-13,62;UBERON:0002036,1.09e-13,62;UBERON:0003082,1.09e-13,62;UBERON:0001009,2.99e-13,112;UBERON:0002385,2.56e-12,64;UBERON:0001015,2.56e-12,64;UBERON:0000383,2.56e-12,64;UBERON:0007503,2.65e-12,78;UBERON:0004872,3.41e-12,83;UBERON:0001637,4.17e-12,42;UBERON:0003509,4.17e-12,42;UBERON:0004572,4.17e-12,42;UBERON:0000490,1.26e-11,148;UBERON:0002049,1.40e-11,78;UBERON:0007798,1.40e-11,78;UBERON:0007500,6.99e-11,59;UBERON:0001981,6.99e-11,59;UBERON:0004537,6.99e-11,59;UBERON:0006965,6.99e-11,59;UBERON:0004573,9.23e-11,33;UBERON:0004571,9.23e-11,33;UBERON:0000055,1.56e-10,68;UBERON:0003102,1.21e-08,99;UBERON:0002199,1.76e-08,46;UBERON:0002416,1.76e-08,46;UBERON:0005256,2.18e-08,122;UBERON:0003104,1.31e-07,160;UBERON:0009142,1.31e-07,160;UBERON:0002100,2.25e-07,199;UBERON:0002384,2.55e-07,371;UBERON:0002097,3.75e-07,41;UBERON:0000947,9.48e-07,21;UBERON:0010191,9.48e-07,21 | |||
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| ||
|short_description=p1@IKBIP | |||
}} | }} |
Latest revision as of 06:20, 16 September 2015
Short description: | p1@IKBIP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_IKBIP_5end |
Coexpression cluster: | C811_Smooth_Fibroblast_Preadipocyte_Chondrocyte_hepatic_basal_Adipocyte |
Association with transcript: | 13bp_to_NM_153687, NM_201612, NM_201613, uc001tfv.2, uc001tfw.2, uc001tfx.2_5end |
EntrezGene: | IKBIP |
HGNC: | 26430 |
UniProt: | Q70UQ0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 5.34e-20 | 76 |
mesodermal cell | 2.63e-17 | 121 |
multi fate stem cell | 3.23e-17 | 427 |
somatic stem cell | 8.49e-17 | 433 |
muscle precursor cell | 2.59e-16 | 58 |
myoblast | 2.59e-16 | 58 |
multi-potent skeletal muscle stem cell | 2.59e-16 | 58 |
stem cell | 1.36e-15 | 441 |
muscle cell | 8.26e-15 | 55 |
smooth muscle cell | 3.83e-13 | 43 |
smooth muscle myoblast | 3.83e-13 | 43 |
embryonic cell | 3.84e-13 | 250 |
vascular associated smooth muscle cell | 4.57e-12 | 32 |
electrically responsive cell | 6.03e-12 | 61 |
electrically active cell | 6.03e-12 | 61 |
skin fibroblast | 1.28e-09 | 23 |
preadipocyte | 6.67e-08 | 12 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 2.90e-07 | 14 |