FFCP PHASE1:Hg19::chr12:98909460..98909474,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:98909460..98909474,+ to FFCP PHASE1:Hg19::chr12:98909460..98909474,+: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7112 | |EntrezGene=7112 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11875 | |HGNC=11875 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=50bp_to_ENST00000546828_5end | |||
|cluster_id=chr12:98909460..98909474,+ | |||
|description=CAGE_peak_2_at_TMPO_5end | |||
|id=chr12:98909460..98909474,+ | |||
|ontology_enrichment_celltype=CL:0000066!3.18e-07!254;CL:0000012!4.36e-07!682;CL:0000548!7.31e-07!679;CL:0000004!7.31e-07!679;CL:0000255!7.31e-07!679 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.56e-08,253 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!2.37e-38!235;DOID:14566!1.21e-36!239;DOID:0050687!2.62e-24!143;DOID:305!8.78e-20!106;DOID:0050686!2.60e-17!137;DOID:2531!1.41e-10!51;DOID:0060083!1.41e-10!51;DOID:1240!1.25e-07!39 | |||
|ontology_enrichment_disease_v019=DOID:305;5.77e-08;106!DOID:2531;6.19e-08;51!DOID:0060083;6.19e-08;51!DOID:1240;2.44e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:162,5.70e-40,235;DOID:14566,1.70e-38,239;DOID:0050687,2.03e-25,143;DOID:305,1.22e-21,106;DOID:0050686,3.64e-17,137;DOID:2531,1.43e-11,51;DOID:0060083,1.43e-11,51;DOID:1240,8.18e-09,39 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.58e-07;9!UBERON:0001557;1.58e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,8.28e-08,9 | |||
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| ||
|short_description=p2@TMPO | |||
}} | }} |
Latest revision as of 06:11, 16 September 2015
Short description: | p2@TMPO |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TMPO_5end |
Coexpression cluster: | NA |
Association with transcript: | 50bp_to_ENST00000546828_5end |
EntrezGene: | TMPO |
HGNC: | 11875 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.56e-08 | 253 |
Ontology term | p-value | n |
---|---|---|
larynx | 8.28e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
cancer | 5.70e-40 | 235 |
disease of cellular proliferation | 1.70e-38 | 239 |
cell type cancer | 2.03e-25 | 143 |
carcinoma | 1.22e-21 | 106 |
organ system cancer | 3.64e-17 | 137 |
hematologic cancer | 1.43e-11 | 51 |
immune system cancer | 1.43e-11 | 51 |
leukemia | 8.18e-09 | 39 |