FFCP PHASE1:Hg19::chr12:96793145..96793161,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:96793145..96793161,- to FFCP PHASE1:Hg19::chr12:96793145..96793161,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5128 | |EntrezGene=5128 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8750 | |HGNC=8750 | ||
|TSSclassifier=strong | |||
|UniProt=F8VUX2 | |UniProt=F8VUX2 | ||
|association_with_transcript=-3bp_to_ENST00000552262_5end | |||
|cluster_id=chr12:96793145..96793161,- | |||
|coexpression_cluster_id=C17 | |||
|description=CAGE_peak_7_at_CDK17_5end | |||
|id=chr12:96793145..96793161,- | |||
|ontology_enrichment_celltype=CL:0000222!4.94e-18!119;CL:0002139!3.93e-14!24;CL:0000359!5.23e-13!32;CL:0000115!7.73e-13!35;CL:0000192!1.63e-11!42;CL:0000514!1.63e-11!42;CL:0000071!4.16e-11!18;CL:0002546!4.16e-11!18;CL:0000213!6.61e-11!57;CL:0000215!6.61e-11!57;CL:0000680!4.37e-10!57;CL:0000056!4.37e-10!57;CL:0000355!4.37e-10!57;CL:0000187!2.20e-09!54;CL:0002078!2.21e-09!44;CL:0000183!4.18e-08!59;CL:1000413!1.78e-07!9;CL:0000393!6.43e-07!60;CL:0000211!6.43e-07!60 | |||
|ontology_enrichment_celltype_v019=CL:0002139;5.72e-23;24!CL:0000071;3.32e-22;18!CL:0000115;5.57e-20;36!CL:0000359;8.57e-18;32!CL:1000413;3.82e-15;9!CL:0002543;4.98e-11;6!CL:0002078;5.02e-11;45!CL:0002539;7.34e-11;10!CL:0002544;9.13e-11;6!CL:0000213;1.40e-09;58!CL:0000215;1.40e-09;58!CL:0000192;2.30e-09;43!CL:0000097;7.76e-09;5!CL:0002494;3.42e-08;16 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,6.05e-23,24;CL:0000115,2.68e-22,36;CL:0000222,3.24e-22,121;CL:0000071,3.84e-22,18;CL:0002546,3.84e-22,18;CL:0000359,4.86e-18,32;CL:0002078,1.12e-17,45;CL:1000413,4.28e-15,9;CL:0000213,2.00e-14,58;CL:0000215,2.00e-14,58;CL:0000192,5.27e-13,43;CL:0000514,5.27e-13,43;CL:0002543,4.57e-11,6;CL:0002539,5.74e-11,10;CL:0002321,6.44e-11,250;CL:0002544,9.04e-11,6;CL:0000680,6.07e-10,58;CL:0000056,6.07e-10,58;CL:0000355,6.07e-10,58;CL:0000187,8.31e-10,55;CL:0000097,1.92e-08,5;CL:0002028,1.92e-08,5;CL:0002494,2.82e-08,16;CL:0000393,3.04e-08,61;CL:0000211,3.04e-08,61;CL:0000569,5.15e-07,4;CL:0000011,5.15e-07,4 | |||
|ontology_enrichment_development_v019=CL:0002546;3.32e-22;18!CL:0000514;2.30e-09;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000055!6.83e-27!69;UBERON:0001981!1.96e-26!60;UBERON:0007500!1.96e-26!60;UBERON:0004537!1.96e-26!60;UBERON:0006965!1.96e-26!60;UBERON:0002049!2.87e-24!79;UBERON:0007798!2.87e-24!79;UBERON:0004872!1.60e-22!84;UBERON:0001637!1.08e-20!42;UBERON:0003509!1.08e-20!42;UBERON:0004572!1.08e-20!42;UBERON:0004535!2.33e-17!110;UBERON:0001009!3.96e-17!113;UBERON:0004573!5.32e-16!33;UBERON:0004571!5.32e-16!33;UBERON:0004111!7.74e-16!241;UBERON:0000025!4.13e-14!194;UBERON:0000477!2.76e-13!286;UBERON:0003914!2.09e-12!118;UBERON:0001986!4.16e-11!18;UBERON:0004638!4.16e-11!18;UBERON:0004852!4.16e-11!18;UBERON:0000483!9.05e-11!309;UBERON:0000119!2.29e-10!312;UBERON:0000487!3.76e-10!22;UBERON:0000947!4.95e-10!21;UBERON:0010191!4.95e-10!21;UBERON:0000914!1.58e-09!83;UBERON:0002329!1.58e-09!83;UBERON:0003077!1.58e-09!83;UBERON:0003059!1.58e-09!83;UBERON:0007282!1.58e-09!83;UBERON:0009618!1.58e-09!83;UBERON:0007285!1.58e-09!83;UBERON:0000490!1.04e-08!138;UBERON:0006914!1.26e-08!25;UBERON:0002385!1.78e-08!63;UBERON:0001015!1.78e-08!63;UBERON:0000383!1.78e-08!63;UBERON:0000486!2.08e-08!82;UBERON:0001134!2.55e-08!61;UBERON:0002036!2.55e-08!61;UBERON:0003082!2.55e-08!61;UBERON:0004290!4.94e-08!70;UBERON:0003915!1.78e-07!9;UBERON:0004700!1.78e-07!9;UBERON:0001917!1.78e-07!9;UBERON:0003081!1.93e-07!216;UBERON:0000467!3.98e-07!625;UBERON:0000480!5.49e-07!626 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;1.89e-26;42!UBERON:0003509;1.89e-26;42!UBERON:0004572;1.89e-26;42!UBERON:0004573;1.29e-25;33!UBERON:0004571;1.29e-25;33!UBERON:0007500;1.73e-22;56!UBERON:0001981;1.73e-22;56!UBERON:0004537;1.73e-22;56!UBERON:0004638;3.32e-22;18!UBERON:0001986;3.32e-22;18!UBERON:0004852;3.32e-22;18!UBERON:0000487;1.01e-21;22!UBERON:0000055;1.57e-20;65!UBERON:0006914;1.98e-18;25!UBERON:0000947;2.18e-18;21!UBERON:0010191;2.18e-18;21!UBERON:0003914;5.12e-16;74!UBERON:0003915;3.82e-15;9!UBERON:0004700;3.82e-15;9!UBERON:0001917;3.82e-15;9!UBERON:0002049;3.92e-13;75!UBERON:0007798;3.92e-13;75!UBERON:0000490;5.01e-12;33!UBERON:0004237;7.34e-11;10!UBERON:0004695;7.34e-11;10!UBERON:0002111;7.34e-11;10!UBERON:0004178;7.34e-11;10!UBERON:0004535;6.10e-10;109!UBERON:0000025;1.52e-08;93!UBERON:0001009;6.82e-08;112!UBERON:0001638;5.43e-07;9!UBERON:0003920;5.43e-07;9!UBERON:0004582;5.43e-07;9 | |||
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| ||
|short_description=p7@CDK17 | |||
}} | }} |
Latest revision as of 04:08, 16 September 2015
Short description: | p7@CDK17 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_CDK17_5end |
Coexpression cluster: | C17_Mast_CD14_Monocytederived_Lymphatic_Smooth_mesenchymal_Macrophage |
Association with transcript: | -3bp_to_ENST00000552262_5end |
EntrezGene: | CDK17 |
HGNC: | 8750 |
UniProt: | F8VUX2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 6.05e-23 | 24 |
endothelial cell | 2.68e-22 | 36 |
mesodermal cell | 3.24e-22 | 121 |
blood vessel endothelial cell | 3.84e-22 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.84e-22 | 18 |
vascular associated smooth muscle cell | 4.86e-18 | 32 |
meso-epithelial cell | 1.12e-17 | 45 |
endothelial cell of artery | 4.28e-15 | 9 |
lining cell | 2.00e-14 | 58 |
barrier cell | 2.00e-14 | 58 |
smooth muscle cell | 5.27e-13 | 43 |
smooth muscle myoblast | 5.27e-13 | 43 |
vein endothelial cell | 4.57e-11 | 6 |
aortic smooth muscle cell | 5.74e-11 | 10 |
embryonic cell | 6.44e-11 | 250 |
aortic endothelial cell | 9.04e-11 | 6 |
muscle precursor cell | 6.07e-10 | 58 |
myoblast | 6.07e-10 | 58 |
multi-potent skeletal muscle stem cell | 6.07e-10 | 58 |
muscle cell | 8.31e-10 | 55 |
mast cell | 1.92e-08 | 5 |
basophil mast progenitor cell | 1.92e-08 | 5 |
cardiocyte | 2.82e-08 | 16 |
electrically responsive cell | 3.04e-08 | 61 |
electrically active cell | 3.04e-08 | 61 |
cardiac mesenchymal cell | 5.15e-07 | 4 |
migratory trunk neural crest cell | 5.15e-07 | 4 |