FFCP PHASE1:Hg19::chr12:88813132..88813143,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:88813132..88813143,- to FFCP PHASE1:Hg19::chr12:88813132..88813143,-: NSchange) |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:88813132..88813143,- | |||
|coexpression_cluster_id=C2247 | |||
|description=CAGE_peak_at_chr12:88813132..88813143,- | |||
|id=chr12:88813132..88813143,- | |||
|ontology_enrichment_celltype=CL:0000057!1.43e-31!75;CL:0002620!1.91e-31!23;CL:0000055!9.02e-31!180;CL:0000188!1.73e-12!9;CL:0000048!2.06e-11!430;CL:0000723!6.24e-11!436;CL:0002551!1.36e-10!6;CL:0000034!2.59e-10!444;CL:0000187!1.32e-09!54;CL:0000680!8.69e-09!57;CL:0000056!8.69e-09!57;CL:0000355!8.69e-09!57;CL:0000183!2.72e-08!59;CL:0000393!4.65e-08!60;CL:0000211!4.65e-08!60;CL:0000594!6.67e-07!3;CL:0002540!9.83e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002620;4.09e-49;23!CL:0000188;2.60e-19;9!CL:0000594;9.88e-16;3!CL:0002551;3.45e-12;6!CL:0002570;6.61e-10;8!CL:0000057;1.67e-08;73!CL:0000680;5.59e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,5.26e-49,23;CL:0000188,2.60e-19,9;CL:0000057,7.33e-16,76;CL:0000594,1.01e-15,3;CL:0002551,4.26e-12,6;CL:0002570,6.85e-10,8;CL:0000048,5.02e-09,427;CL:0000723,8.64e-09,433;CL:0000034,1.75e-08,441;CL:0000187,7.18e-07,55 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!5.99e-10!5;DOID:450!5.99e-10!5;DOID:66!5.99e-10!5;DOID:423!5.99e-10!5;DOID:0080000!5.99e-10!5;DOID:11722!5.99e-10!5 | |||
|ontology_enrichment_disease_v019=DOID:17;9.62e-24;5!DOID:450;9.62e-24;5!DOID:66;9.62e-24;5!DOID:423;9.62e-24;5!DOID:0080000;9.62e-24;5!DOID:11722;9.62e-24;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,8.78e-24,5;DOID:450,8.78e-24,5;DOID:66,8.78e-24,5;DOID:423,8.78e-24,5;DOID:0080000,8.78e-24,5;DOID:11722,8.78e-24,5 | |||
|ontology_enrichment_uberon=UBERON:0002199!1.12e-20!45;UBERON:0002416!1.12e-20!45;UBERON:0002097!1.78e-20!40;UBERON:0000914!2.93e-15!83;UBERON:0002329!2.93e-15!83;UBERON:0003077!2.93e-15!83;UBERON:0003059!2.93e-15!83;UBERON:0007282!2.93e-15!83;UBERON:0009618!2.93e-15!83;UBERON:0007285!2.93e-15!83;UBERON:0003102!1.41e-14!95;UBERON:0004290!8.07e-14!70;UBERON:0000486!1.77e-12!82;UBERON:0002067!3.83e-09!9;UBERON:0004016!3.83e-09!9;UBERON:0010083!3.83e-09!9;UBERON:0002385!5.91e-09!63;UBERON:0001015!5.91e-09!63;UBERON:0000383!5.91e-09!63;UBERON:0001134!1.26e-08!61;UBERON:0002036!1.26e-08!61;UBERON:0003082!1.26e-08!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;2.58e-24;41!UBERON:0002199;1.39e-22;46!UBERON:0002416;1.39e-22;46!UBERON:0003102;2.45e-17;50!UBERON:0002067;2.59e-12;9!UBERON:0001134;1.40e-10;16!UBERON:0002036;1.40e-10;16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,4.64e-33,41;UBERON:0002199,2.24e-32,46;UBERON:0002416,2.24e-32,46;UBERON:0003102,3.09e-14,99;UBERON:0002067,2.83e-12,9;UBERON:0004016,2.83e-12,9;UBERON:0010083,2.83e-12,9;UBERON:0002329,1.65e-11,71;UBERON:0003059,1.65e-11,71;UBERON:0007282,1.65e-11,71;UBERON:0004290,1.65e-11,71;UBERON:0009618,1.65e-11,71;UBERON:0003077,2.64e-11,72;UBERON:0007285,2.64e-11,72;UBERON:0007524,4.17e-11,73;UBERON:0000486,7.93e-11,83;UBERON:0007503,3.45e-10,78 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.247532705920093,0,1.34465029290355,0,0,0.487932798790507,0.123121058076788,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,1.72131935057184,0.286836620748814,0.354668382198357,0.560677600142307,0,0,0,0.67355336034844,0.163461903113459,0,0,0.937285727335186,1.24864030732128,1.71141546463335,0.747243402759005,0.704606991862589,1.13311061057692,1.12360645361799,0.408308342509787,0,0.206651562351531,0,0,0,0,0.336672227908132,0.375355559615893,0.831192346452549,0,0,0.45071417671979,0.113432183160021,2.51145489964407,1.49490172172997,6.35795703478686,2.40072876867522,3.7098910525838,0.772921620136887,0.930584281657949,3.03797398034279,1.36411807225678,7.32057945307932,5.79914361446486,0.646584227275248,6.39017266529906,3.42557133973977,4.0694542154517,0,0,0,0,0,0,0,0,0,1.56449532329816,0,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0.336393253036082,0,1.6134422880609,0,0,6.762422020448,0,0,0.771622122786426,0,0.532844358032199,0,0,0,11.4007664502807,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0.415941723061614,0,0.157702415033935,0,0,0,0,0,0.184369168541703,5.90808578382963,0,0,0,0,0,0,0,0,0.248107807818777,0,0,0,0,0,0,0.308419387605311,1.06537035187876,0.328508624055237,0.519254429183621,0.116210378459959,0,0,0,0,0,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773365746336976,4.77550713055398,3.53058451870098,3.30807773962873,9.13072081380326,3.19036726611303,6.98858344812027,0.0890320356467374,0,0,0,0,0,0,0,0.616067160352178,0,0,0,0,0.372158369359667,0.632758849437452,0.190630193923825,0,0,0.636406495851874,0,0,0,0,0.404364963146632,0,0.421258456238981,0,5.60541026151954,0,0,0.424216295861138,1.13008116620243,0,0,2.19225442626881,0,0,0.405820753925408,0,0,0,0,0,0,0.211107635297664,1.64647446479951,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,2.42721043499027,0,0,0,0,0,0,0,0.890469640183247,0,0,0,0,0,0,0,1.86623752597084,0,0,0,0,0,1.11136990144637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.416024019039416,0,0,0,0,0,0,0,0,0,0,0,0,0.397429223405979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.577901179803038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5085370753095,0,0,0.653174720218818,0,0.164185041498678,3.74853647927928,0,0,0,0,0,0,0,0.213574825135389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.74627401443437,1.16856654923612,2.77402930751307,0.189403005275089,0.50313580350515,0.889811221596536,2.97492088916001,0,0,1.33069634990671,0,1.34940933649081,0.310525913752519,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0.737318726261158,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0.511280428554946,0,0,0.62041277132864,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0.196308467114945,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217716747896961,0,0,0.215166616178029,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.247532705920093,0,1.34465029290355,0,0,0.487932798790507,0.123121058076788,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,1.72131935057184,0.286836620748814,0.354668382198357,0.560677600142307,0,0,0,0.67355336034844,0.163461903113459,0,0,0.937285727335186,1.24864030732128,1.71141546463335,0.747243402759005,0.704606991862589,1.13311061057692,1.12360645361799,0.408308342509787,0,0.206651562351531,0,0,0,0,0.336672227908132,0.375355559615893,0.831192346452549,0,0,0.45071417671979,0.113432183160021,2.51145489964407,1.49490172172997,6.35795703478686,2.40072876867522,3.7098910525838,0.772921620136887,0.930584281657949,3.03797398034279,1.36411807225678,7.32057945307932,5.79914361446486,0.646584227275248,6.39017266529906,3.42557133973977,4.0694542154517,0,0,0,0,0,0,0,0,0,1.56449532329816,0,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0.336393253036082,0,1.6134422880609,0,0,6.762422020448,0,0,0.771622122786426,0,0.532844358032199,0,0,0,11.4007664502807,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0.415941723061614,0,0.157702415033935,0,0,0,0,0,0.184369168541703,5.90808578382963,0,0,0,0,0,0,0,0,0.248107807818777,0,0,0,0,0,0,0.308419387605311,1.06537035187876,0.328508624055237,0.519254429183621,0.116210378459959,0,0,0,0,0,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773365746336976,4.77550713055398,3.53058451870098,3.30807773962873,9.13072081380326,3.19036726611303,6.98858344812027,0.0890320356467374,0,0,0,0,0,0,0,0.616067160352178,0,0,0,0,0.372158369359667,0.632758849437452,0.190630193923825,0,0,0.636406495851874,0,0,0,0,0.404364963146632,0,0.421258456238981,0,5.60541026151954,0,0,0.424216295861138,1.13008116620243,0,0,2.19225442626881,0,0,0.405820753925408,0,0,0,0,0,0,0.211107635297664,1.64647446479951,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,2.42721043499027,0,0,0,0,0,0,0,0.890469640183247,0,0,0,0,0,0,0,1.86623752597084,0,0,0,0,0,1.11136990144637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.416024019039416,0,0,0,0,0,0,0,0,0,0,0,0,0.397429223405979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.577901179803038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5085370753095,0,0,0.653174720218818,0,0.164185041498678,3.74853647927928,0,0,0,0,0,0,0,0.213574825135389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.74627401443437,1.16856654923612,2.77402930751307,0.189403005275089,0.50313580350515,0.889811221596536,2.97492088916001,0,0,1.33069634990671,0,1.34940933649081,0.310525913752519,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0.737318726261158,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0.511280428554946,0,0,0.62041277132864,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0.196308467114945,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217716747896961,0,0,0.215166616178029,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr12:88813132..88813143,- | |||
}} | }} |
Latest revision as of 13:12, 24 July 2015
Short description: | p@chr12:88813132..88813143, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:88813132..88813143, - |
Coexpression cluster: | C2247_liposarcoma_Fibroblast_Smooth_Skeletal_Mesenchymal_Pancreatic_mesenchymal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 5.26e-49 | 23 |
cell of skeletal muscle | 2.60e-19 | 9 |
fibroblast | 7.33e-16 | 76 |
skeletal muscle satellite cell | 1.01e-15 | 3 |
fibroblast of dermis | 4.26e-12 | 6 |
mesenchymal stem cell of adipose | 6.85e-10 | 8 |
multi fate stem cell | 5.02e-09 | 427 |
somatic stem cell | 8.64e-09 | 433 |
stem cell | 1.75e-08 | 441 |
muscle cell | 7.18e-07 | 55 |
Ontology term | p-value | n |
---|---|---|
skin of body | 4.64e-33 | 41 |
integument | 2.24e-32 | 46 |
integumental system | 2.24e-32 | 46 |
surface structure | 3.09e-14 | 99 |
dermis | 2.83e-12 | 9 |
dermatome | 2.83e-12 | 9 |
future dermis | 2.83e-12 | 9 |
somite | 1.65e-11 | 71 |
presomitic mesoderm | 1.65e-11 | 71 |
presumptive segmental plate | 1.65e-11 | 71 |
dermomyotome | 1.65e-11 | 71 |
trunk paraxial mesoderm | 1.65e-11 | 71 |
paraxial mesoderm | 2.64e-11 | 72 |
presumptive paraxial mesoderm | 2.64e-11 | 72 |
dense mesenchyme tissue | 4.17e-11 | 73 |
multilaminar epithelium | 7.93e-11 | 83 |
epithelial vesicle | 3.45e-10 | 78 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 8.78e-24 | 5 |
myotonic disease | 8.78e-24 | 5 |
muscle tissue disease | 8.78e-24 | 5 |
myopathy | 8.78e-24 | 5 |
muscular disease | 8.78e-24 | 5 |
myotonic dystrophy | 8.78e-24 | 5 |