FFCP PHASE1:Hg19::chr12:81172288..81172301,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:81172288..81172301,+ | |||
|coexpression_cluster_id=C21 | |||
|description=CAGE_peak_at_chr12:81172288..81172301,+ | |||
|id=chr12:81172288..81172301,+ | |||
|ontology_enrichment_celltype=CL:0000945!1.73e-18!24;CL:0000826!1.73e-18!24;CL:0000542!8.89e-15!53;CL:0000051!8.89e-15!53;CL:0000838!1.86e-12!52;CL:0000080!6.32e-12!6;CL:0000946!7.56e-09!1;CL:0000786!7.56e-09!1;CL:0000980!7.56e-09!1 | |||
|ontology_enrichment_celltype_v019=CL:0000945;2.50e-29;24!CL:0000946;3.45e-21;1!CL:0000786;3.45e-21;1!CL:0000542;8.97e-10;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,2.50e-29,24;CL:0000826,2.50e-29,24;CL:0000946,3.45e-21,1;CL:0000786,3.45e-21,1;CL:0000980,3.45e-21,1;CL:0000838,2.34e-18,52;CL:0000542,5.22e-18,53;CL:0000051,5.22e-18,53;CL:0000785,2.73e-11,2;CL:0000955,2.73e-11,2;CL:0000818,2.73e-11,2;CL:0000954,2.73e-11,2;CL:0000816,2.73e-11,2;CL:0000988,1.07e-10,177;CL:0002087,4.28e-08,115;CL:0000817,5.93e-08,3;CL:0002031,9.55e-08,120;CL:0000738,8.43e-07,136 | |||
|ontology_enrichment_development_v019=CL:0000954;2.73e-11;2!CL:0000051;8.97e-10;53 | |||
|ontology_enrichment_disease=DOID:0060058!6.51e-12!10;DOID:0060060!6.03e-09!1;DOID:0060061!6.03e-09!1;DOID:8691!6.03e-09!1;DOID:630!1.02e-08!1;DOID:0050177!1.02e-08!1;DOID:0050427!1.02e-08!1;DOID:4960!1.18e-08!1;DOID:0070004!1.18e-08!1;DOID:2355!1.59e-08!1;DOID:12603!1.84e-08!1 | |||
|ontology_enrichment_disease_v019=DOID:0060060;1.88e-21;1!DOID:0060061;1.88e-21;1!DOID:8691;1.88e-21;1!DOID:630;8.53e-21;1!DOID:0050177;8.53e-21;1!DOID:0050427;8.53e-21;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060060,1.88e-21,1;DOID:0060061,1.88e-21,1;DOID:8691,1.88e-21,1;DOID:630,7.72e-21,1;DOID:0050177,7.72e-21,1;DOID:0050427,7.72e-21,1 | |||
|ontology_enrichment_uberon=UBERON:0002331!2.47e-07!10;UBERON:0000358!2.47e-07!10;UBERON:0000307!2.47e-07!10;UBERON:0000091!2.47e-07!10;UBERON:0000087!2.47e-07!10;UBERON:0007806!2.47e-07!10;UBERON:0008780!2.47e-07!10;UBERON:0005728!2.47e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0002331;1.01e-18;10!UBERON:0000178;1.02e-12;15!UBERON:0000179;1.02e-12;15!UBERON:0000463;1.02e-12;15!UBERON:0000478;3.54e-08;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,1.01e-18,10;UBERON:0000358,1.01e-18,10;UBERON:0000307,1.01e-18,10;UBERON:0000091,1.01e-18,10;UBERON:0000087,1.01e-18,10;UBERON:0007010,1.01e-18,10;UBERON:0007806,1.01e-18,10;UBERON:0008780,1.01e-18,10;UBERON:0005728,1.01e-18,10;UBERON:0000178,1.02e-12,15;UBERON:0000179,1.02e-12,15;UBERON:0000463,1.02e-12,15;UBERON:0000478,3.54e-08,24 | |||
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|short_description=p@chr12:81172288..81172301,+ | |||
}} | }} |
Latest revision as of 01:32, 25 September 2015
Short description: | p@chr12:81172288..81172301, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:81172288..81172301, + |
Coexpression cluster: | C21_cord_mycosis_hairy_xeroderma_adult_CD4_anaplastic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 2.50e-29 | 24 |
pro-B cell | 2.50e-29 | 24 |
antibody secreting cell | 3.45e-21 | 1 |
plasma cell | 3.45e-21 | 1 |
plasmablast | 3.45e-21 | 1 |
lymphoid lineage restricted progenitor cell | 2.34e-18 | 52 |
lymphocyte | 5.22e-18 | 53 |
common lymphoid progenitor | 5.22e-18 | 53 |
mature B cell | 2.73e-11 | 2 |
pre-B-II cell | 2.73e-11 | 2 |
transitional stage B cell | 2.73e-11 | 2 |
small pre-B-II cell | 2.73e-11 | 2 |
immature B cell | 2.73e-11 | 2 |
hematopoietic cell | 1.07e-10 | 177 |
nongranular leukocyte | 4.28e-08 | 115 |
precursor B cell | 5.93e-08 | 3 |
hematopoietic lineage restricted progenitor cell | 9.55e-08 | 120 |
leukocyte | 8.43e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 1.01e-18 | 10 |
blastocyst | 1.01e-18 | 10 |
blastula | 1.01e-18 | 10 |
bilaminar disc | 1.01e-18 | 10 |
inner cell mass | 1.01e-18 | 10 |
cleaving embryo | 1.01e-18 | 10 |
connecting stalk | 1.01e-18 | 10 |
inner cell mass derived epiblast | 1.01e-18 | 10 |
extraembryonic mesoderm | 1.01e-18 | 10 |
blood | 1.02e-12 | 15 |
haemolymphatic fluid | 1.02e-12 | 15 |
organism substance | 1.02e-12 | 15 |
extraembryonic structure | 3.54e-08 | 24 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 1.88e-21 | 1 |
cutaneous T cell lymphoma | 1.88e-21 | 1 |
mycosis fungoides | 1.88e-21 | 1 |
genetic disease | 7.72e-21 | 1 |
monogenic disease | 7.72e-21 | 1 |
xeroderma pigmentosum | 7.72e-21 | 1 |