FFCP PHASE1:Hg19::chr12:66342468..66342497,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:66342468..66342497,- to FFCP PHASE1:Hg19::chr12:66342468..66342497,-: NSchange) |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-209bp_to_ENST00000544279_5end | |||
|cluster_id=chr12:66342468..66342497,- | |||
|description=CAGE_peak_1_at_ENST00000544279_5end | |||
|id=chr12:66342468..66342497,- | |||
|ontology_enrichment_celltype=CL:0002139!1.14e-16!24;CL:0000115!9.89e-15!35;CL:0000220!3.61e-13!246;CL:0002321!7.11e-13!248;CL:0002078!4.39e-11!44;CL:0000071!2.70e-10!18;CL:0002546!2.70e-10!18;CL:0000213!4.73e-10!57;CL:0000215!4.73e-10!57;CL:0000222!9.82e-10!119;CL:0005020!1.30e-08!6;CL:0002138!1.30e-08!6;CL:0005022!1.30e-08!6;CL:0000076!1.75e-08!62;CL:0002543!2.12e-08!6;CL:0000066!1.49e-07!254 | |||
|ontology_enrichment_celltype_v019=CL:0002139;2.03e-24;24!CL:0002138;6.04e-21;6!CL:0000115;1.91e-17;36!CL:0002078;7.40e-15;45!CL:0002144;3.25e-11;3!CL:0000071;2.19e-10;18!CL:0000213;4.01e-10;58!CL:0000215;4.01e-10;58!CL:0000228;7.55e-09;1!CL:0002581;7.55e-09;1!CL:0002372;7.55e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,1.95e-24,24;CL:0000115,9.69e-24,36;CL:0005020,9.12e-21,6;CL:0002138,9.12e-21,6;CL:0005022,9.12e-21,6;CL:0002078,1.26e-18,45;CL:0000213,4.86e-14,58;CL:0000215,4.86e-14,58;CL:0002144,2.64e-11,3;CL:0000071,1.80e-10,18;CL:0002546,1.80e-10,18;CL:0002581,7.27e-09,1;CL:0000228,8.49e-09,1;CL:0002372,8.49e-09,1;CL:0000066,1.48e-07,253;CL:0000222,5.82e-07,121 | |||
|ontology_enrichment_development_v019=CL:0005022;6.04e-21;6!CL:0002546;2.19e-10;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3347;7.55e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3347,9.17e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0002049!4.90e-12!79;UBERON:0007798!4.90e-12!79;UBERON:0000055!9.57e-12!69;UBERON:0004535!2.24e-10!110;UBERON:0001986!2.70e-10!18;UBERON:0004638!2.70e-10!18;UBERON:0004852!2.70e-10!18;UBERON:0001009!9.19e-10!113;UBERON:0000487!3.63e-09!22;UBERON:0004872!3.68e-09!84;UBERON:0001981!1.46e-08!60;UBERON:0007500!1.46e-08!60;UBERON:0004537!1.46e-08!60;UBERON:0006965!1.46e-08!60;UBERON:0006914!1.47e-07!25;UBERON:0000483!1.60e-07!309;UBERON:0000490!1.83e-07!138;UBERON:0003914!2.04e-07!118;UBERON:0000119!2.97e-07!312 | |||
|ontology_enrichment_uberon_v019=UBERON:0001473;9.04e-16;8!UBERON:0004536;9.04e-16;8!UBERON:0006558;9.04e-16;8!UBERON:0002465;1.18e-12;10!UBERON:0010523;3.25e-11;3!UBERON:0001915;3.25e-11;3!UBERON:0001982;3.25e-11;3!UBERON:0004638;2.19e-10;18!UBERON:0001986;2.19e-10;18!UBERON:0004852;2.19e-10;18!UBERON:0000487;1.82e-08;22!UBERON:0006914;1.99e-07;25!UBERON:0001264;2.07e-07;10!UBERON:0000490;5.69e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001473,1.23e-15,8;UBERON:0004536,1.23e-15,8;UBERON:0006558,1.23e-15,8;UBERON:0002465,1.50e-12,10;UBERON:0010523,2.64e-11,3;UBERON:0001915,2.64e-11,3;UBERON:0001982,2.64e-11,3;UBERON:0004638,1.80e-10,18;UBERON:0001986,1.80e-10,18;UBERON:0004852,1.80e-10,18;UBERON:0000055,1.19e-09,68;UBERON:0000487,1.56e-08,22;UBERON:0002049,3.29e-08,78;UBERON:0007798,3.29e-08,78;UBERON:0001264,1.64e-07,10;UBERON:0006914,1.74e-07,25 | |||
|phase1_expression=0.908391896352783,0.428201047781966,0.422863212287913,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0.313454721478088,0.572471974262113,0,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289693037921647,0,0,0.567208902984407,0.221729397462564,0.175669571386252,0,0,0,0,0,0,0,0,0,0.39752481473341,0,0.347140501607594,0,0.419499436209906,0,0,1.03366703667732,2.13459757612026,2.67776490211736,1.61131726843659,2.28081631715554,0.976248230192678,1.47065232138347,0,1.87529429396568,0.673588117878509,0.450445921933289,1.53316637465883,0.949265659568129,0.732806975721629,0,0,0,0,0.379891534993739,0.397227542439656,0,0.354668382198357,0,0,0.24666754841716,0.933633106199299,0.404132016209064,0.326923806226917,0,0,0,0,0.570471821544449,0.149448680551801,0.704606991862589,0.971237666208789,0.140450806702248,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0.113432183160021,0,0,0,0,0.103052529238439,0,0,0,0,0,0,0,0,0,0,0,0,0.286804595389004,0,0,0,0,0,0.36497735907583,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,2.21446636387394,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0.201057944823262,0.0925884451585296,0.325808305310325,0,0,0.34779121492523,0,2.16549671641611,0.462985512576611,0.570762456703795,0,0,0,0,0,0,0,0,0.179117045405697,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0.239624855491583,0,1.42636905040718,0,0,0,0,0,0,0,0.76228387266739,0,0,0.167516265334349,0,0,0,0,0,0,0,0.207970861530807,0,0.157702415033935,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0.744323423456331,0.153461973288062,0,0.256278298511402,0,0.160853921143607,1.48418066444991,0,0,0.410635780069046,0,0,0,0,0.552485933615378,0,0,0,0,0,0,0,0,1.13733384070897,0,0.215915916102139,0,0,0,0,0,0,0,0,0.256450125116389,0,2.27764876265012,0,0,0,0,0,0,0.386682873168488,0.308097234229289,0,0.137836572484531,0.537101224341368,0.145016693914229,0.170453254832202,0.0890320356467374,0,0.192190067365106,0.127612712494584,0.30347334256665,0,0.31481234683064,0,0.308033580176089,0.532306030317022,0,0.18532421910392,0,0,0,0,0,0,0.636406495851874,0,0,0,0,0.404364963146632,0,0,0,0,0,0,0.282810863907425,0,0,0,0,0,0.655894752046633,0.608731130888112,0.30982349809975,0,0,0,0.35667105148125,0,0,0,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0.852408440419239,0,0,0,0,0,3.22795244566427,0,0,0,0,0,0.306806047506464,0,0,0.179736702294654,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0.569710279235006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.326465616318295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99396161812156,0.661983911750998,1.56966459203613,2.38944859545918,0,0.416024019039416,0.173559738335131,0.0979923974143777,0,0,0.171986032471617,0,0,0,0,0,0.677942222341597,0.822251547880505,0.596143835108969,0,0,0.240476460754601,0,0,0,0.458146384663663,0,2.0167671718341,0,0,0,0,0,0.577901179803038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590564889088493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.959575986597226,0,0,0,0,0,0.653174720218818,8.38111340937412,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27668251554036,0,0,0,0.327872630709804,0,0,0,0,0,0,0,0,0,0.606596470166591,0,0.235265819698172,0,0,0,0.233713309847224,0,0.189403005275089,0.251567901752575,0,4.11912123114462,0.151230923763239,0.310874401165561,0.147855149989634,0.159296767163702,0,0,0,0,0,0,0.380805212168795,0.406870733204662,0.181848659202559,0.322231671127465,0,0,0,0.343395705182793,0.336749488765919,0,0.192619830407303,0,0,0,0.231522474323834,0,0,0,0,0,0.192914038270915,0.675769762612291,0,0,0.303859956177382,0,0,0,0,0,0.983091635014877,0.422624246717254,0,0,0,0,0.368211900503681,2.37795163123056,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0.205116364240755,0,0,0,0,0,0,0,0.231051332300676,0,1.3807198521202,0,0.0752103283492573,0,0,0,0.327543835020193,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.685952037749674,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0.691259661814092,0,0.354996002191696,0.596493833314104,0,0.22910686854405,0.62041277132864,0,0,2.94450700845729,0,0,0,0,0.971421986118279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0.0644578879735772,0,0.71421575442263,0.705789743431384,0.481448200135009,0,0,0,0,0,0,0,0,0.462175628631418,0,0,0,0,0,0,0,0,0,0,0,0,0,0.714193294391221,0,0,0.33639558774184,0.0636471582781649,0.202117188958219,0,0,0,0.143444410785353,0.665320713092027,0.0814032686109745,3.62872975984233,0,0,0,0,0.813792356631477,0,0,0 | |phase1_expression=0.908391896352783,0.428201047781966,0.422863212287913,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0.313454721478088,0.572471974262113,0,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289693037921647,0,0,0.567208902984407,0.221729397462564,0.175669571386252,0,0,0,0,0,0,0,0,0,0.39752481473341,0,0.347140501607594,0,0.419499436209906,0,0,1.03366703667732,2.13459757612026,2.67776490211736,1.61131726843659,2.28081631715554,0.976248230192678,1.47065232138347,0,1.87529429396568,0.673588117878509,0.450445921933289,1.53316637465883,0.949265659568129,0.732806975721629,0,0,0,0,0.379891534993739,0.397227542439656,0,0.354668382198357,0,0,0.24666754841716,0.933633106199299,0.404132016209064,0.326923806226917,0,0,0,0,0.570471821544449,0.149448680551801,0.704606991862589,0.971237666208789,0.140450806702248,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0.113432183160021,0,0,0,0,0.103052529238439,0,0,0,0,0,0,0,0,0,0,0,0,0.286804595389004,0,0,0,0,0,0.36497735907583,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,2.21446636387394,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0.201057944823262,0.0925884451585296,0.325808305310325,0,0,0.34779121492523,0,2.16549671641611,0.462985512576611,0.570762456703795,0,0,0,0,0,0,0,0,0.179117045405697,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0.239624855491583,0,1.42636905040718,0,0,0,0,0,0,0,0.76228387266739,0,0,0.167516265334349,0,0,0,0,0,0,0,0.207970861530807,0,0.157702415033935,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0.744323423456331,0.153461973288062,0,0.256278298511402,0,0.160853921143607,1.48418066444991,0,0,0.410635780069046,0,0,0,0,0.552485933615378,0,0,0,0,0,0,0,0,1.13733384070897,0,0.215915916102139,0,0,0,0,0,0,0,0,0.256450125116389,0,2.27764876265012,0,0,0,0,0,0,0.386682873168488,0.308097234229289,0,0.137836572484531,0.537101224341368,0.145016693914229,0.170453254832202,0.0890320356467374,0,0.192190067365106,0.127612712494584,0.30347334256665,0,0.31481234683064,0,0.308033580176089,0.532306030317022,0,0.18532421910392,0,0,0,0,0,0,0.636406495851874,0,0,0,0,0.404364963146632,0,0,0,0,0,0,0.282810863907425,0,0,0,0,0,0.655894752046633,0.608731130888112,0.30982349809975,0,0,0,0.35667105148125,0,0,0,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0.852408440419239,0,0,0,0,0,3.22795244566427,0,0,0,0,0,0.306806047506464,0,0,0.179736702294654,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0.569710279235006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.326465616318295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99396161812156,0.661983911750998,1.56966459203613,2.38944859545918,0,0.416024019039416,0.173559738335131,0.0979923974143777,0,0,0.171986032471617,0,0,0,0,0,0.677942222341597,0.822251547880505,0.596143835108969,0,0,0.240476460754601,0,0,0,0.458146384663663,0,2.0167671718341,0,0,0,0,0,0.577901179803038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590564889088493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.959575986597226,0,0,0,0,0,0.653174720218818,8.38111340937412,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27668251554036,0,0,0,0.327872630709804,0,0,0,0,0,0,0,0,0,0.606596470166591,0,0.235265819698172,0,0,0,0.233713309847224,0,0.189403005275089,0.251567901752575,0,4.11912123114462,0.151230923763239,0.310874401165561,0.147855149989634,0.159296767163702,0,0,0,0,0,0,0.380805212168795,0.406870733204662,0.181848659202559,0.322231671127465,0,0,0,0.343395705182793,0.336749488765919,0,0.192619830407303,0,0,0,0.231522474323834,0,0,0,0,0,0.192914038270915,0.675769762612291,0,0,0.303859956177382,0,0,0,0,0,0.983091635014877,0.422624246717254,0,0,0,0,0.368211900503681,2.37795163123056,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0.205116364240755,0,0,0,0,0,0,0,0.231051332300676,0,1.3807198521202,0,0.0752103283492573,0,0,0,0.327543835020193,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.685952037749674,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0.691259661814092,0,0.354996002191696,0.596493833314104,0,0.22910686854405,0.62041277132864,0,0,2.94450700845729,0,0,0,0,0.971421986118279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0.0644578879735772,0,0.71421575442263,0.705789743431384,0.481448200135009,0,0,0,0,0,0,0,0,0.462175628631418,0,0,0,0,0,0,0,0,0,0,0,0,0,0.714193294391221,0,0,0.33639558774184,0.0636471582781649,0.202117188958219,0,0,0,0.143444410785353,0.665320713092027,0.0814032686109745,3.62872975984233,0,0,0,0,0.813792356631477,0,0,0 | ||
|short_description=p1@ENST00000544279 | |||
}} | }} |
Latest revision as of 11:29, 24 July 2015
Short description: | p1@ENST00000544279 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000544279_5end |
Coexpression cluster: | NA |
Association with transcript: | -209bp_to_ENST00000544279_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 1.95e-24 | 24 |
endothelial cell | 9.69e-24 | 36 |
lymphangioblast | 9.12e-21 | 6 |
endothelial cell of lymphatic vessel | 9.12e-21 | 6 |
vascular lymphangioblast | 9.12e-21 | 6 |
meso-epithelial cell | 1.26e-18 | 45 |
lining cell | 4.86e-14 | 58 |
barrier cell | 4.86e-14 | 58 |
capillary endothelial cell | 2.64e-11 | 3 |
blood vessel endothelial cell | 1.80e-10 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.80e-10 | 18 |
perirenal preadipocyte | 7.27e-09 | 1 |
multinucleate cell | 8.49e-09 | 1 |
myotube | 8.49e-09 | 1 |
epithelial cell | 1.48e-07 | 253 |
mesodermal cell | 5.82e-07 | 121 |
Ontology term | p-value | n |
---|---|---|
lymphatic vessel | 1.23e-15 | 8 |
lymph vasculature | 1.23e-15 | 8 |
lymphatic part of lymphoid system | 1.23e-15 | 8 |
lymphoid system | 1.50e-12 | 10 |
microcirculatory vessel | 2.64e-11 | 3 |
endothelium of capillary | 2.64e-11 | 3 |
capillary | 2.64e-11 | 3 |
blood vessel endothelium | 1.80e-10 | 18 |
endothelium | 1.80e-10 | 18 |
cardiovascular system endothelium | 1.80e-10 | 18 |
vessel | 1.19e-09 | 68 |
simple squamous epithelium | 1.56e-08 | 22 |
vasculature | 3.29e-08 | 78 |
vascular system | 3.29e-08 | 78 |
pancreas | 1.64e-07 | 10 |
squamous epithelium | 1.74e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
osteosarcoma | 9.17e-09 | 1 |