FFCP PHASE1:Hg19::chr12:66220727..66220766,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:66220727..66220766,- to FFCP PHASE1:Hg19::chr12:66220727..66220766,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=204010 | |EntrezGene=204010 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=35752 | |HGNC=35752 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000489520,NR_026825,uc001sso.2_5end | |||
|cluster_id=chr12:66220727..66220766,- | |||
|description=CAGE_peak_1_at_RPSAP52_5end | |||
|id=chr12:66220727..66220766,- | |||
|ontology_enrichment_celltype=CL:0000055!4.97e-29!180;CL:0000220!9.16e-21!246;CL:0002321!1.34e-20!248;CL:0002371!5.24e-19!591;CL:0000548!6.88e-18!679;CL:0000004!6.88e-18!679;CL:0000255!6.88e-18!679;CL:0000012!2.23e-17!682;CL:0000680!3.09e-16!57;CL:0000056!3.09e-16!57;CL:0000355!3.09e-16!57;CL:0000144!5.44e-16!625;CL:0000187!2.53e-14!54;CL:0000393!8.84e-14!60;CL:0000211!8.84e-14!60;CL:0000183!9.65e-14!59;CL:0000057!1.40e-12!75;CL:0000192!4.39e-12!42;CL:0000514!4.39e-12!42;CL:0000359!4.65e-12!32;CL:0000003!1.99e-11!722;CL:0000222!3.88e-11!119;CL:0002620!2.38e-10!23;CL:0002368!3.20e-07!13;CL:0002076!5.28e-07!43 | |||
|ontology_enrichment_celltype_v019=CL:0002620;3.27e-13;23!CL:0000359;1.11e-11;32!CL:0000192;1.44e-07;43!CL:0002551;1.74e-07;6!CL:0000187;4.09e-07;55!CL:1000413;8.13e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,2.56e-13,58;CL:0000056,2.56e-13,58;CL:0000355,2.56e-13,58;CL:0002620,2.73e-13,23;CL:0000057,8.65e-13,76;CL:0000359,1.94e-12,32;CL:0000187,4.02e-11,55;CL:0000393,1.03e-10,61;CL:0000211,1.03e-10,61;CL:0002321,1.37e-09,250;CL:0000192,2.49e-09,43;CL:0000514,2.49e-09,43;CL:0002551,1.44e-07,6;CL:1000413,7.93e-07,9;CL:0000222,8.27e-07,121 | |||
|ontology_enrichment_development_v019=CL:0000355;8.56e-08;58!CL:0000514;1.44e-07;43 | |||
|ontology_enrichment_disease=DOID:2394!5.69e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;7.64e-10;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,7.20e-10,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!1.47e-22!83;UBERON:0002329!1.47e-22!83;UBERON:0003077!1.47e-22!83;UBERON:0003059!1.47e-22!83;UBERON:0007282!1.47e-22!83;UBERON:0009618!1.47e-22!83;UBERON:0007285!1.47e-22!83;UBERON:0000486!9.19e-20!82;UBERON:0001637!3.46e-19!42;UBERON:0003509!3.46e-19!42;UBERON:0004572!3.46e-19!42;UBERON:0004290!1.62e-18!70;UBERON:0001981!7.21e-16!60;UBERON:0007500!7.21e-16!60;UBERON:0004537!7.21e-16!60;UBERON:0006965!7.21e-16!60;UBERON:0005256!1.13e-15!143;UBERON:0004573!2.94e-15!33;UBERON:0004571!2.94e-15!33;UBERON:0000055!8.28e-15!69;UBERON:0003102!8.59e-15!95;UBERON:0001134!5.26e-14!61;UBERON:0002036!5.26e-14!61;UBERON:0003082!5.26e-14!61;UBERON:0000490!2.40e-13!138;UBERON:0002049!4.81e-13!79;UBERON:0007798!4.81e-13!79;UBERON:0004872!4.88e-13!84;UBERON:0002385!5.15e-13!63;UBERON:0001015!5.15e-13!63;UBERON:0000383!5.15e-13!63;UBERON:0003914!2.13e-12!118;UBERON:0002199!2.96e-12!45;UBERON:0002416!2.96e-12!45;UBERON:0002097!1.40e-11!40;UBERON:0002100!9.43e-11!216;UBERON:0000119!2.95e-10!312;UBERON:0000483!3.39e-10!309;UBERON:0000475!3.49e-10!365;UBERON:0000947!6.95e-10!21;UBERON:0010191!6.95e-10!21;UBERON:0004535!6.84e-09!110;UBERON:0001009!1.71e-08!113;UBERON:0003104!1.01e-07!238;UBERON:0009142!1.01e-07!238;UBERON:0000467!7.94e-07!625 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;6.60e-17;33!UBERON:0004571;6.60e-17;33!UBERON:0001637;1.07e-15;42!UBERON:0003509;1.07e-15;42!UBERON:0004572;1.07e-15;42!UBERON:0000947;1.70e-10;21!UBERON:0010191;1.70e-10;21!UBERON:0007500;7.14e-10;56!UBERON:0001981;7.14e-10;56!UBERON:0004537;7.14e-10;56!UBERON:0002097;1.86e-09;41!UBERON:0002199;6.44e-09;46!UBERON:0002416;6.44e-09;46!UBERON:0002067;3.27e-07;9!UBERON:0003102;5.27e-07;50!UBERON:0003915;8.13e-07;9!UBERON:0004700;8.13e-07;9!UBERON:0001917;8.13e-07;9!UBERON:0002385;9.12e-07;31!UBERON:0001015;9.12e-07;31!UBERON:0000383;9.12e-07;31!UBERON:0000055;9.25e-07;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,2.09e-21,42;UBERON:0003509,2.09e-21,42;UBERON:0004572,2.09e-21,42;UBERON:0004573,3.37e-18,33;UBERON:0004571,3.37e-18,33;UBERON:0000486,3.41e-17,83;UBERON:0002329,1.61e-16,71;UBERON:0003059,1.61e-16,71;UBERON:0007282,1.61e-16,71;UBERON:0004290,1.61e-16,71;UBERON:0009618,1.61e-16,71;UBERON:0003077,4.23e-16,72;UBERON:0007285,4.23e-16,72;UBERON:0007500,6.58e-16,59;UBERON:0001981,6.58e-16,59;UBERON:0004537,6.58e-16,59;UBERON:0006965,6.58e-16,59;UBERON:0007524,1.08e-15,73;UBERON:0003102,6.23e-15,99;UBERON:0007503,1.49e-14,78;UBERON:0000490,2.55e-14,148;UBERON:0002199,1.12e-13,46;UBERON:0002416,1.12e-13,46;UBERON:0002097,2.73e-12,41;UBERON:0000055,2.97e-12,68;UBERON:0004872,7.56e-12,83;UBERON:0001134,8.99e-12,62;UBERON:0002036,8.99e-12,62;UBERON:0003082,8.99e-12,62;UBERON:0002385,4.42e-11,64;UBERON:0001015,4.42e-11,64;UBERON:0000383,4.42e-11,64;UBERON:0000947,1.78e-10,21;UBERON:0010191,1.78e-10,21;UBERON:0002049,6.53e-10,78;UBERON:0007798,6.53e-10,78;UBERON:0005256,1.45e-09,122;UBERON:0003914,1.50e-08,117;UBERON:0002067,2.76e-07,9;UBERON:0004016,2.76e-07,9;UBERON:0010083,2.76e-07,9;UBERON:0003915,7.93e-07,9;UBERON:0004700,7.93e-07,9;UBERON:0001917,7.93e-07,9 | |||
|phase1_expression=0,0.428201047781966,0,0,0,0,0,3.79031924056099,0,0.737201809504527,0.697801167972428,0,0,0.123766352960047,0.331397375727916,1.34465029290355,0.602694528023977,2.92124036154949,0.975865597581014,1.84681587115182,0.204000691244253,0,0.286235987131057,0.547497700291537,0.502170558379211,0,0,0,0,0,0,1.83884244895785,3.31326510656075,5.17655614233503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.722878304769133,3.00802746381534,0.724232594804119,2.3858578411533,4.37971383272372,0.850813354476611,1.33037638477538,0.966182642624386,0.0654895377488563,0.364295288292542,0,0,0,0,0,0,0,2.98143611050058,2.58070378531837,1.73570250803797,1.13061588384802,1.25849830862972,1.10047216776027,2.29894463190492,0.775250277507987,0.71153252537342,0.33472061276467,0,0,0,1.83831540172934,2.43042584364528,0.892997282840798,0.22452937262617,0.900891843866578,1.53316637465883,1.89853131913626,2.19842092716489,0,0,0.872188104285069,0,3.29239330327907,5.95841313659485,2.0078563452417,3.54668382198357,0,1.06748995729705,0.24666754841716,0.622422070799533,0.808264032418128,0.163461903113459,0,0,0.234321431833797,1.5608003841516,3.99330275081114,4.63290909710583,15.1490503250457,19.1010074354395,19.803563745017,4.28723759635276,4.79053837515895,0.619954687054593,1.18800285728205,0.247266929278557,0.910161361938026,0,10.268502951198,6.25592599359821,7.20366700258876,0,2.45190236639216,2.25357088359895,0.907457465280168,1.79389635688862,1.2813443329114,1.90738711043606,3.90118424909723,1.64884046781502,1.28820270022815,1.11670113798954,4.72573730275545,0.974370051611986,2.27190396819703,1.65689817556139,0,1.06502877754984,2.31729825923573,4.40857540007268,10.6293469239813,9.81886034127005,6.30970109855808,0.121973706129595,0,0,0,0.504641701751257,0,1.56449532329816,0.643240938192885,1.38134921352481,0.928735856063958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,3.40225884766739,0,11.158715937691,0.925884451585296,0,0,0,1.27523445472584,0.117408694235822,0.577465791044295,0,0,0,0,0,0,0,6.56136837907439,7.0552493843521,6.37987937590739,5.1943943167652,4.65014301622339,9.96794965829549,0,0,0,0,0,0.317489471460845,0,0,0,0.205654985406647,0,0,0.336393253036082,0,0.1466765716419,1.42198887333556,0,10.143633030672,1.32969058292435,0,1.02882949704857,0,0.532844358032199,0,0,0,11.7265026345745,0,2.37585561880029,0.904318131178758,0,0.099972991182057,0,0,0,0.239624855491583,0,2.85273810081437,5.64647096003559,8.6300055471161,6.98337756635593,0,0,0,0,0,0,1.54657762555539,0.670065061337395,3.18969375826582,0,0,0,0,0,0.271265023699736,0.623912584592421,0.535286966391485,0.157702415033935,3.86566669475954,0,0,2.0694614258501,0.664225598535437,3.13427586520895,9.29654674808486,0.195801157462741,0,0,0,0,0,0,0,0,0,0.280660094433074,0,0,0.321707842287215,0,8.94416224055402,8.70052454034323,8.29484275739472,5.19254429183621,10.4589340613963,0.120859449591622,2.40607764363942,1.28913384510255,0.34444334449382,1.0925470080403,0,0.902399225814824,2.23344477602803,2.35304930753057,0,1.89992932007176,0,1.02056223165909,0,0,0,0.501689773854853,0.254876273045038,0.831076008928724,0.447749509444357,0,0.261435451024901,5.64190275256056,0.984043937099117,0.650756789328606,0.103041011647722,0,0,2.87132768998086,3.90036147621913,1.6068392984416,2.80345083047154,1.3864375540318,2.45605879561807,3.58375088459779,0.429680979473094,1.16013355131383,2.98293195956353,0.267096106940212,1.81813406897076,1.92190067365106,9.82617886208298,0.6069466851333,4.18360994367557,4.09256050879832,10.455559052409,0.308033580176089,1.06461206063404,11.3091288969759,4.26245703939016,1.86062352764589,0,0,0,0.767693373934002,0.42793898803392,21.9560241068896,1.56989728039846,0.539617372749944,0.823611089208164,1.06031162111118,3.63928466831969,0,10.9527198622135,0,6.09283724078211,1.05650146756755,0.545999645631943,0,5.65040583101214,6.61638412255349,3.3171948762061,1.75380354101505,0,0.655894752046633,1.82619339266434,4.957175969596,3.66204283291914,3.01163839628508,0.88424136911809,0.7133421029625,12.4166372424709,0,0.658589785919804,0,0,6.15821521443277,5.3624182042863,2.17781969722645,0,0.86101074534246,0,0,1.83778720165568,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42068073403207,0,0,0,0,0.140669416410513,2.89402633059555,0,3.3780065300479,0,0,0,0.102268682502155,0,4.3545542272653,2.78591888556713,0,0,0,0,0,0,0,0,0,0,0,2.84483620713749,0.254253650292766,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0.139423744278603,0,0.341826167541004,0,0,0,0,0.824378340616761,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.664653872707185,1.98595173525299,0.627865836814451,2.38944859545918,0,0.277349346026277,0,0.979923974143776,0.522355239482415,0,0.51595809741485,0,0,0,0,0.970817393606503,0,1.0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| ||
|short_description=p1@RPSAP52 | |||
}} | }} |
Latest revision as of 23:30, 19 September 2015
Short description: | p1@RPSAP52 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RPSAP52_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000489520, NR_026825, uc001sso.2_5end |
EntrezGene: | RPSAP52 |
HGNC: | 35752 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 2.56e-13 | 58 |
myoblast | 2.56e-13 | 58 |
multi-potent skeletal muscle stem cell | 2.56e-13 | 58 |
skin fibroblast | 2.73e-13 | 23 |
fibroblast | 8.65e-13 | 76 |
vascular associated smooth muscle cell | 1.94e-12 | 32 |
muscle cell | 4.02e-11 | 55 |
electrically responsive cell | 1.03e-10 | 61 |
electrically active cell | 1.03e-10 | 61 |
embryonic cell | 1.37e-09 | 250 |
smooth muscle cell | 2.49e-09 | 43 |
smooth muscle myoblast | 2.49e-09 | 43 |
fibroblast of dermis | 1.44e-07 | 6 |
endothelial cell of artery | 7.93e-07 | 9 |
mesodermal cell | 8.27e-07 | 121 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 7.20e-10 | 14 |