FFCP PHASE1:Hg19::chr12:54380112..54380126,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:54380112..54380126,+ to FFCP PHASE1:Hg19::chr12:54380112..54380126,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3226 | |EntrezGene=3226 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5122 | |HGNC=5122 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000514415_5end | |||
|cluster_id=chr12:54380112..54380126,+ | |||
|description=CAGE_peak_5_at_HOXC10_5end | |||
|id=chr12:54380112..54380126,+ | |||
|ontology_enrichment_celltype=CL:0000188!4.07e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000680;5.73e-14;7!CL:0002540;9.01e-10;6!CL:0002594;1.10e-09;4!CL:0000056;5.06e-09;4!CL:0000188;1.00e-07;9!CL:0000515;5.53e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002594,8.26e-10,4;CL:0002540,8.97e-10,6;CL:0000515,4.13e-09,4;CL:0000188,4.75e-08,9;CL:0000594,5.82e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000515;5.06e-09;4 | |||
|ontology_enrichment_disease=DOID:0050687!7.28e-14!143;DOID:14566!5.34e-11!239;DOID:162!8.12e-11!235;DOID:305!1.53e-08!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001737!9.42e-12!9;UBERON:0001013!3.51e-08!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;3.16e-20;9!UBERON:0001557;3.16e-20;9!UBERON:0001310;1.10e-09;4!UBERON:0001134;6.25e-09;16!UBERON:0002036;6.25e-09;16!UBERON:0001013;6.88e-07;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.05e-20,9;UBERON:0001557,1.60e-10,19;UBERON:0001310,8.26e-10,4;UBERON:0001013,7.22e-07,14 | |||
|phase1_expression=0,0,0,0,0,0.872338524100369,0,2.52687949370732,0.522371256399677,0,0,0,0,0.618831764800233,0.662794751455832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.722878304769133,1.00267582127178,0,0,0,0,0,0,0.72038491523742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0.496971951695318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.24173020827702,0.704606991862589,1.13311061057692,0.702254033511242,0,0,0,0,0,8.19145225744224,2.87447256726495,0,0,0,0,0,0,0,0,0,0,0,0,1.8034837803194,1.48893485065272,1.85653965465393,2.92311015483596,0,0,0,0,0,1.69560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.31259040111563,1.85443159085912,4.82022059766964,2.75734931830985,2.61455332910887,2.84724742933316,2.56179485504312,2.35465758150415,4.23221872641029,0,0,0,0,0,0,0,0,0,0,0,0,0.603173834469785,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290633938513962,0,0,0,0,0,0,0.698476837213859,2.29193055334967,1.17217447210047,0,0.719792448923265,0.600686115687835,1.71495859578347,0,0,0,1.29271715757778,0,4.22651376278,0,0,3.85811061393213,1.41849132023278,2.93064396917709,0,0.542621605391443,3.29296134712308,2.60588947434988,0,0.791951872933429,0,0,0,0,0,0,0,0,2.85273810081437,2.17171960001369,1.64381058040307,1.43248770591916,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0.36807447515742,1.00034104211935,0,0,0,0,0,0,0,0,0.664225598535437,0,0.260650843404249,0,0,0,0,0,0,0,0.604780586659361,0,0.306923946576125,0.561320188866147,0,1.53512174720011,0.160853921143607,1.48418066444991,2.00472601943452,0.532685175939381,0.492762936082855,0,2.32420756919918,0,0,0,0,0,0,0,0.308061348417659,0,0,0.316654886678627,0,0,0.863663664408557,0,2.16757150035082,2.00675909541941,0.764628819135115,1.66215201785745,2.23874754722178,0,0,0,0,0,0.309123034943167,0.0915694648183434,0.82509499920588,0,0,0,0.580024309752732,0.154048617114644,0,1.51620229732984,1.93356440762893,1.74020032697074,1.53407929348982,1.51354460599453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,1.05650146756755,0,0,0,0,0,0,0,0,5.47858017799301,1.54911749049875,2.25356482025793,2.15117028306077,0.88424136911809,2.85336841185,0,0.211107635297664,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.534120355637366,0,0.980160863924127,0,0,0,0.159426272728822,0,0,0,0,0,5.934101654863,1.41011906195721,0,0,0,0,0,0,0,0,0,2.54004524022652,0,0,0,0,0,0.18714054040822,1.17206543417515,0.728163130497081,0,1.13654458722565,0,0,0,0,0,0,0,1.90012867315194,0,0,0.503865495708552,0,0,0,0,0,0,0,0,2.22273980289274,0,0,0,0,1.57427999993152,0,0,0,0.472775363535873,0,0,0.347249989866585,0,0,0,0,0,0,1.30726156222788,1.25481369850743,0.0769502585037971,0,0,0.0897576444097721,0.217294743844016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72989514525104,1.98401704060365,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.693373365065693,0,0,0,0.34945333648406,0,2.70917727609438,2.33885814675794,2.6276946257027,0,0.0882561266915003,0,0,0,0,0.391102765469606,0,0,1.39866726707491,2.16135625731159,0.229073192331831,0,0,0,0,0,0.836822770498666,1.4279750469085,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,4.65983798109815,0,0,0.0674035438541849,0.590564889088493,0,0,0,0,0,0,0,0,0,1.34173875039706,2.52178263357434,0.944182586429966,0,0,0.575745591958336,0,0,0,0,0,0,0,0,0.340776043570843,2.37955392192264,0,0,0,0,0,0,0,0,0,0,4.54506753365272,0.243585196761792,1.91502377331055,0,0,0,0.983617892129413,0,0,0,0,0,0,0,0,0,1.81978941049977,0,0.470531639396343,0,0.28984205722165,0.895528817321244,1.40227985908335,2.77402930751307,2.08343305802598,3.52195062453605,0,0,0,0,0,0.159296767163702,0,0,0,0,0.521745061811734,0,0,0,0,0,0,0.398095888698616,0,0,0.673498977531838,0,0.385239660814607,0,0,0,1.85217979459067,0.244736704506468,0,0,1.75427239662966,1.23682402162117,0,0,0,0,0.303859956177382,0,0,0,0,3.60370833731054,0.245772908753719,0.422624246717254,0,0.106691729694141,0,0,0.920529751259204,0,0,0,0,0.157265941855896,0.54604819096007,0.33946505990805,0.425149840203366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.25739752552359,0.825788063434183,0,1.15525666150338,0.381382095467167,0.690359926060101,0.795664888465099,0.150420656698515,2.0170506870352,0,0,0.163771917510097,1.03499260351932,0,0,0,0,0,0,0.496211178389294,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0.354581522651905,0,0,0,0.560544326627578,0,0.863710364874486,0,0,0,0.23248285073625,0.695433089210318,0,0,0,0,0,0.473328002922261,0.340853619036631,0,1.14553434272025,0,0,0,0.98150233615243,0,0.647428837187895,0.513314034281235,0,0.485710993059139,0.467878926924211,0,0,0.22589216407792,0.109940516745429,0.603851374266694,0,0,0,0,2.59244201811789,0,0,0.4226557275834,1.35941691750254,0,0,0,0,0,0,0,0,0,1.41994405973866,0,0,0,0.743990036333503,0.462175628631418,0,0,0,0,0,0,0.18378979906969,0,0.151557396436479,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 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| ||
|short_description=p5@HOXC10 | |||
}} | }} |
Latest revision as of 04:39, 19 September 2015
Short description: | p5@HOXC10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_HOXC10_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000514415_5end |
EntrezGene: | HOXC10 |
HGNC: | 5122 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the umbilical artery | 8.26e-10 | 4 |
mesenchymal stem cell of the bone marrow | 8.97e-10 | 6 |
skeletal muscle myoblast | 4.13e-09 | 4 |
cell of skeletal muscle | 4.75e-08 | 9 |
skeletal muscle satellite cell | 5.82e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
larynx | 1.05e-20 | 9 |
upper respiratory tract | 1.60e-10 | 19 |
umbilical artery | 8.26e-10 | 4 |
adipose tissue | 7.22e-07 | 14 |