FFCP PHASE1:Hg19::chr12:53070275..53070285,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:53070275..53070285,- | |||
|coexpression_cluster_id=C17 | |||
|description=CAGE_peak_at_chr12:53070275..53070285,- | |||
|id=chr12:53070275..53070285,- | |||
|ontology_enrichment_celltype=CL:0002274!3.19e-44!5;CL:0000457!3.19e-44!5;CL:0002191!3.19e-44!5;CL:0000097!3.19e-44!5;CL:0000831!3.19e-44!5;CL:0002028!3.19e-44!5;CL:0000163!1.42e-24!9;CL:0000764!1.43e-18!2;CL:0000765!1.43e-18!2;CL:0000050!1.43e-18!2;CL:0000038!1.43e-18!2;CL:0000558!1.43e-18!2;CL:0000547!1.43e-18!2;CL:0000549!1.43e-18!2;CL:0000550!1.43e-18!2;CL:0000552!1.43e-18!2;CL:0002623!1.41e-12!3;CL:0000151!1.27e-11!35;CL:0000810!5.30e-10!1;CL:0000895!5.30e-10!1;CL:0002436!5.30e-10!1;CL:0002427!5.30e-10!1;CL:0002428!5.30e-10!1;CL:0002429!5.30e-10!1;CL:0002433!5.30e-10!1;CL:0002431!5.30e-10!1;CL:0002432!5.30e-10!1;CL:0000622!6.77e-08!5 | |||
|ontology_enrichment_celltype_v019=CL:0000097;8.98e-89;5!CL:0000163;6.62e-50;9!CL:0000151;5.06e-12;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,8.98e-89,5;CL:0002028,8.98e-89,5;CL:0000163,6.62e-50,9;CL:0000151,2.78e-13,36;CL:0000839,1.53e-07,66;CL:0000557,1.92e-07,67;CL:0000766,5.48e-07,72 | |||
|ontology_enrichment_development_v019=UBERON:0007297;7.14e-26;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003408!2.63e-21!10;UBERON:0002370!1.07e-19!4;UBERON:0005058!1.07e-19!4;UBERON:0009113!1.07e-19!4;UBERON:0003295!1.07e-19!4;UBERON:0005562!1.07e-19!4;UBERON:0001042!7.19e-14!10;UBERON:0009145!7.19e-14!10;UBERON:0003351!2.45e-13!6;UBERON:0006562!1.25e-12!11;UBERON:0004177!1.63e-11!7;UBERON:0001301!1.98e-10!1;UBERON:0000989!3.71e-10!1;UBERON:0008811!3.71e-10!1;UBERON:0006258!3.71e-10!1;UBERON:0005876!3.71e-10!1;UBERON:0004874!3.71e-10!1;UBERON:0006834!9.82e-10!1;UBERON:0008814!2.59e-09!15;UBERON:0002390!1.60e-08!102;UBERON:0003061!1.60e-08!102;UBERON:0000974!3.25e-08!10;UBERON:0002193!1.30e-07!112;UBERON:0009722!1.64e-07!11;UBERON:0007690!1.64e-07!11;UBERON:0001557!2.20e-07!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0001301;3.99e-50;1!UBERON:0006947;9.46e-18;3!UBERON:0004054;9.46e-18;3!UBERON:0005904;1.13e-13;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001301,3.99e-50,1;UBERON:0006947,9.46e-18,3;UBERON:0004054,9.46e-18,3;UBERON:0005904,1.13e-13,4;UBERON:0005103,1.69e-07,8;UBERON:0000083,1.69e-07,8;UBERON:0009201,1.69e-07,8;UBERON:0006553,1.69e-07,8;UBERON:0003074,1.69e-07,8;UBERON:0003060,1.69e-07,8;UBERON:0000080,8.37e-07,9;UBERON:0002120,8.37e-07,9;UBERON:0004875,8.37e-07,9;UBERON:0005721,8.37e-07,9;UBERON:0005754,8.37e-07,9;UBERON:0007297,8.37e-07,9 | |||
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|short_description=p@chr12:53070275..53070285,- | |||
}} | }} |
Latest revision as of 09:39, 24 July 2015
Short description: | p@chr12:53070275..53070285, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:53070275..53070285, - |
Coexpression cluster: | C17_Mast_CD14_Monocytederived_Lymphatic_Smooth_mesenchymal_Macrophage |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 8.98e-89 | 5 |
basophil mast progenitor cell | 8.98e-89 | 5 |
endocrine cell | 6.62e-50 | 9 |
secretory cell | 2.78e-13 | 36 |
myeloid lineage restricted progenitor cell | 1.53e-07 | 66 |
granulocyte monocyte progenitor cell | 1.92e-07 | 67 |
myeloid leukocyte | 5.48e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
epididymis | 3.99e-50 | 1 |
male genital duct | 9.46e-18 | 3 |
internal male genitalia | 9.46e-18 | 3 |
duct of male reproductive system | 1.13e-13 | 4 |
mesonephric epithelium | 1.69e-07 | 8 |
mesonephric tubule | 1.69e-07 | 8 |
nephric duct | 1.69e-07 | 8 |
renal duct | 1.69e-07 | 8 |
mesonephric duct | 1.69e-07 | 8 |
pronephric duct | 1.69e-07 | 8 |
mesonephros | 8.37e-07 | 9 |
pronephros | 8.37e-07 | 9 |
nephrogenic cord | 8.37e-07 | 9 |
pronephric mesoderm | 8.37e-07 | 9 |
rostral part of nephrogenic cord | 8.37e-07 | 9 |
presumptive pronephric mesoderm | 8.37e-07 | 9 |