FFCP PHASE1:Hg19::chr12:49351191..49351222,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:49351191..49351222,- to FFCP PHASE1:Hg19::chr12:49351191..49351222,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=377 | |EntrezGene=377 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=654 | |HGNC=654 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=5bp_to_ENST00000485410,ENST00000541959_5end | |||
|cluster_id=chr12:49351191..49351222,- | |||
|description=CAGE_peak_2_at_ARF3_5end | |||
|id=chr12:49351191..49351222,- | |||
|ontology_enrichment_celltype=CL:0000115!1.28e-18!35;CL:0002139!1.53e-15!24;CL:0002078!4.12e-15!44;CL:0000213!4.45e-15!57;CL:0000215!4.45e-15!57;CL:0000222!2.47e-14!119;CL:0000071!2.92e-12!18;CL:0002546!2.92e-12!18;CL:1000413!6.58e-07!9;CL:0002321!6.70e-07!248 | |||
|ontology_enrichment_celltype_v019=CL:0000115;5.41e-16;36!CL:0002139;1.29e-15;24!CL:0000071;2.39e-12;18!CL:0002078;1.81e-10;45!CL:0000213;7.64e-10;58!CL:0000215;7.64e-10;58!CL:1000413;5.73e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,3.67e-19,36;CL:0002078,1.26e-15,45;CL:0000213,1.43e-15,58;CL:0000215,1.43e-15,58;CL:0002139,1.53e-15,24;CL:0000222,4.21e-14,121;CL:0000071,2.92e-12,18;CL:0002546,2.92e-12,18;CL:1000413,6.58e-07,9;CL:0002321,7.77e-07,250 | |||
|ontology_enrichment_development_v019=CL:0002546;2.39e-12;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004535!1.86e-20!110;UBERON:0001009!7.76e-19!113;UBERON:0000025!3.26e-18!194;UBERON:0002049!2.43e-17!79;UBERON:0007798!2.43e-17!79;UBERON:0000055!3.71e-17!69;UBERON:0004111!7.76e-16!241;UBERON:0001981!3.95e-14!60;UBERON:0007500!3.95e-14!60;UBERON:0004537!3.95e-14!60;UBERON:0006965!3.95e-14!60;UBERON:0004872!1.12e-13!84;UBERON:0000477!1.23e-12!286;UBERON:0001986!2.92e-12!18;UBERON:0004638!2.92e-12!18;UBERON:0004852!2.92e-12!18;UBERON:0003081!3.62e-12!216;UBERON:0003914!2.30e-11!118;UBERON:0000487!5.06e-11!22;UBERON:0001637!3.34e-10!42;UBERON:0003509!3.34e-10!42;UBERON:0004572!3.34e-10!42;UBERON:0001869!1.06e-09!32;UBERON:0000119!1.21e-09!312;UBERON:0000483!3.20e-09!309;UBERON:0001893!4.15e-09!34;UBERON:0002619!6.42e-09!22;UBERON:0006914!8.70e-09!25;UBERON:0001017!1.03e-08!82;UBERON:0002791!1.31e-08!33;UBERON:0001950!2.21e-08!20;UBERON:0002020!3.55e-08!34;UBERON:0003528!3.55e-08!34;UBERON:0002780!4.47e-08!41;UBERON:0001890!4.47e-08!41;UBERON:0006240!4.47e-08!41;UBERON:0000956!6.54e-08!25;UBERON:0000203!6.54e-08!25;UBERON:0005743!1.07e-07!86;UBERON:0003080!1.64e-07!42;UBERON:0000955!1.88e-07!69;UBERON:0006238!1.88e-07!69;UBERON:0004573!5.51e-07!33;UBERON:0004571!5.51e-07!33;UBERON:0001049!5.69e-07!57;UBERON:0005068!5.69e-07!57;UBERON:0006241!5.69e-07!57;UBERON:0007135!5.69e-07!57;UBERON:0003915!6.58e-07!9;UBERON:0004700!6.58e-07!9;UBERON:0001917!6.58e-07!9;UBERON:0002616!8.40e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;2.39e-12;18!UBERON:0001986;2.39e-12;18!UBERON:0004852;2.39e-12;18!UBERON:0000487;3.62e-11;22!UBERON:0000055;6.60e-10;65!UBERON:0007500;1.15e-09;56!UBERON:0001981;1.15e-09;56!UBERON:0004537;1.15e-09;56!UBERON:0006914;3.89e-09;25!UBERON:0002619;7.76e-09;22!UBERON:0003914;8.43e-09;74!UBERON:0002049;1.23e-08;75!UBERON:0007798;1.23e-08;75!UBERON:0001869;1.36e-08;32!UBERON:0001950;2.36e-08;20!UBERON:0001637;2.58e-08;42!UBERON:0003509;2.58e-08;42!UBERON:0004572;2.58e-08;42!UBERON:0001893;5.43e-08;34!UBERON:0002791;6.97e-08;32!UBERON:0000956;8.42e-08;25!UBERON:0000203;8.42e-08;25!UBERON:0000490;1.91e-07;33!UBERON:0003528;2.83e-07;34!UBERON:0002020;2.83e-07;34!UBERON:0003915;5.73e-07;9!UBERON:0004700;5.73e-07;9!UBERON:0001917;5.73e-07;9 | |||
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| ||
|short_description=p2@ARF3 | |||
}} | }} |
Latest revision as of 14:49, 18 September 2015
Short description: | p2@ARF3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ARF3_5end |
Coexpression cluster: | NA |
Association with transcript: | 5bp_to_ENST00000485410, ENST00000541959_5end |
EntrezGene: | ARF3 |
HGNC: | 654 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 3.67e-19 | 36 |
meso-epithelial cell | 1.26e-15 | 45 |
lining cell | 1.43e-15 | 58 |
barrier cell | 1.43e-15 | 58 |
endothelial cell of vascular tree | 1.53e-15 | 24 |
mesodermal cell | 4.21e-14 | 121 |
blood vessel endothelial cell | 2.92e-12 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.92e-12 | 18 |
endothelial cell of artery | 6.58e-07 | 9 |
embryonic cell | 7.77e-07 | 250 |