FFCP PHASE1:Hg19::chr12:42877764..42877803,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:42877764..42877803,- to FFCP PHASE1:Hg19::chr12:42877764..42877803,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=144165 | |EntrezGene=144165 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17019 | |HGNC=17019 | ||
|TSSclassifier=strong | |||
|UniProt=Q96MT3,B3KVG6 | |UniProt=Q96MT3,B3KVG6 | ||
|association_with_transcript=0bp_to_ENST00000455697,NM_001144882,NM_001144883,uc001rnl.2,uc010skw.1_5end | |||
|cluster_id=chr12:42877764..42877803,- | |||
|description=CAGE_peak_4_at_PRICKLE1_5end | |||
|id=chr12:42877764..42877803,- | |||
|ontology_enrichment_celltype=CL:0002139!3.98e-08!24;CL:0000071!8.82e-08!18;CL:0002546!8.82e-08!18 | |||
|ontology_enrichment_celltype_v019=CL:0002139;1.51e-11;24!CL:0000071;1.65e-11;18!CL:0000236;1.80e-07;13!CL:1000413;4.98e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000071,6.99e-12,18;CL:0002546,6.99e-12,18;CL:0002139,7.20e-12,24;CL:0000115,4.30e-07,36;CL:1000413,4.55e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002546;1.65e-11;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000477!1.02e-08!286;UBERON:0000119!6.31e-08!312;UBERON:0001986!8.82e-08!18;UBERON:0004638!8.82e-08!18;UBERON:0004852!8.82e-08!18;UBERON:0000483!1.33e-07!309;UBERON:0004111!8.78e-07!241 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.65e-11;18!UBERON:0001986;1.65e-11;18!UBERON:0004852;1.65e-11;18!UBERON:0000487;1.24e-08;22!UBERON:0006914;4.11e-07;25!UBERON:0003915;4.98e-07;9!UBERON:0004700;4.98e-07;9!UBERON:0001917;4.98e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,6.99e-12,18;UBERON:0001986,6.99e-12,18;UBERON:0004852,6.99e-12,18;UBERON:0000487,6.35e-09,22;UBERON:0006914,2.34e-07,25;UBERON:0003915,4.55e-07,9;UBERON:0004700,4.55e-07,9;UBERON:0001917,4.55e-07,9 | |||
|phase1_expression=0.54503513781167,0.642301571672949,0.281908808191942,2.00146596706261,0.446961094427288,2.61701557230111,0,1.26343974685366,0.522371256399677,0,0,0,0.791300934685361,0.74259811776028,1.98838425436749,0,0.602694528023977,0,0.975865597581014,0.984968464614303,0.816002764977012,0.940364164434263,0.286235987131057,0.821246550437305,0,0.0764134057479513,0,0,0,0,0,0.919421224478927,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,5.27988733383968,2.18455444504853,2.66852776159066,2.13365111283254,2.40237592221607,2.87376219977242,5.2883589822789,4.77026877267682,0.569212969109448,0,1.14681968437569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5905718941022,0.486634870302636,1.22895262313288,2.21729397462564,0.966182642624386,1.83370705696798,0,0,0,0,0,0,0,0,1.39133685156694,1.72046919021225,2.08284300964557,1.13061588384802,2.93649605346934,0.275118041940067,1.46296476575767,1.55050055501597,2.49036383880697,0.33472061276467,1.61131726843659,1.52054421143703,2.19655851793353,1.10298924103761,1.62028389576352,2.41109266367015,2.02076435363553,1.68917220724983,0,2.84779697870439,0.732806975721629,0,0,0,0,0.379891534993739,0.397227542439656,0.860509862246441,0.709336764396714,1.68203280042692,0,0,1.55605517699883,0.538842688278752,0.490385709340376,0.756787138224657,2.30470369792,0,0.312160076830321,0,0,0.23486899728753,0,0,0.816616685019573,0,0.516628905878827,2.37600571456411,0.741800787835671,0,0.718618141816238,0,0.375355559615893,0.554128230968366,0,0.30648779579902,1.20190447125277,0.453728732640084,0.358779271377724,0.213557388818567,0.635795703478686,0,0.206105058476878,0.257640540045629,0.18611685633159,0.168776332241266,0.0974370051611986,0.252433774244115,0.460249493211497,0.80823028409406,0.355009592516614,0.503760491138201,0.508681776931463,0.386521706326594,0.272746120590835,0.286804595389004,2.31750041646231,0.795178609928912,1.85910308591229,1.14027160516907,1.51392510525377,1.82488679537915,1.56449532329816,0.643240938192885,0,0.928735856063958,1.44375896333917,0.236613600079688,0,0,0.110293972732394,0,0,0,0,0,1.4763109092493,0,0.8231480226628,1.47008711385542,0,0.982827216677626,0.590789906681404,0,0.368965315629341,0.686271241194102,0.439001141634502,0,0.301586917234893,0.277765335475589,0.325808305310325,1.03993478527958,0,0.115930404975077,0.939269553886573,1.15493158208859,0,0.570762456703795,0,0,0,0,0,0,0.503946384596579,0.567100388969546,1.25381931783988,0.871901815541886,3.06706143332169,0,0,0,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0.285826432630578,0.897048674762886,0.87192013766656,0.36669142910475,0.387815147273333,0,0.845302752556,1.59562869950922,2.08014873822732,0,1.41849132023278,0,0.57191197463259,0,0,0.65147236858747,0.355391948742546,0,0,0,0.199945982364114,0,0,0,0,1.14861935834114,1.42636905040718,0.289562613335158,0,0.358121926479791,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.736148950314839,1.00034104211935,0.813795071099207,0,0.178428988797162,0.630809660135739,0.819989904948992,0.601892199455438,0,0,1.32845119707087,0.368738337083406,0.781952530212746,0.195801157462741,0.686286847621712,0,0,0,0,0,0.30239029332968,0.992431231275107,0.61384789315225,0.841980283299221,0.512556597022804,1.02341449813341,0.64341568457443,2.96836132889982,2.00472601943452,1.06537035187876,2.62806899244189,0.519254429183621,1.97557643381931,0.241718899183244,0.601519410909855,0.276242966807689,1.37777337797528,1.45672934405374,1.57349297951309,0.902399225814824,0.539107359730903,0,1.46139224653261,1.26661954671451,0,0.340187410553031,0.431831832204279,0,0.812839312631559,0.501689773854853,1.01950509218015,0,1.34324852833307,0,0,0.512900250232778,1.64007322849853,0,0.618246069886334,0.27470839445503,0.082509499920588,0,0.650060246036521,0,0.870036464629098,0.462145851343933,1.07452572308291,0.275673144969061,0.107420244868274,0.290033387828457,0.511359764496605,0.534192213880424,0.330569830721956,0,0.127612712494584,0.2023155617111,0.464845549297286,1.5740617341532,2.0911118104818,0.616067160352178,0.532306030317022,0,0.18532421910392,0,1.116475108079,1.58189712359363,0.38126038784765,0.511795582622668,0.42793898803392,1.27281299170375,0.78494864019923,2.15846949099978,0.274537029736055,0.471249609382746,1.01091240786658,0,0,0.48763373908959,0.487426979262569,0,1.77449884830381,1.1312434556297,2.26016233240486,1.10273068709225,0,0,0,0,0,0.30982349809975,0.281695602532241,0,0.0982490410131212,0,0.354761064070598,0.211107635297664,0.987884678879706,0,0,0,0,0,1.12972560932135,0,0,0,0,1.01489521846434,0,0.569647187174163,0,0.822724546172388,0.648473311192717,0,0,0.213648142254946,4.81239927631679,0,0.743212700502875,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0,0,0,0,3.69262196843137,2.97501246323581,0,4.22961015263549,0,1.31857361344705,1.33496573924465,0,0,0.23874448473769,0.296964680832639,0.307160702099232,0,0.281338832821026,0.779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| ||
|short_description=p4@PRICKLE1 | |||
}} | }} |
Latest revision as of 08:03, 18 September 2015
Short description: | p4@PRICKLE1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PRICKLE1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000455697, NM_001144882, NM_001144883, uc001rnl.2, uc010skw.1_5end |
EntrezGene: | PRICKLE1 |
HGNC: | 17019 |
UniProt: | Q96MT3B3KVG6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
blood vessel endothelial cell | 6.99e-12 | 18 |
embryonic blood vessel endothelial progenitor cell | 6.99e-12 | 18 |
endothelial cell of vascular tree | 7.20e-12 | 24 |
endothelial cell | 4.30e-07 | 36 |
endothelial cell of artery | 4.55e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 6.99e-12 | 18 |
endothelium | 6.99e-12 | 18 |
cardiovascular system endothelium | 6.99e-12 | 18 |
simple squamous epithelium | 6.35e-09 | 22 |
squamous epithelium | 2.34e-07 | 25 |
endothelial tube | 4.55e-07 | 9 |
arterial system endothelium | 4.55e-07 | 9 |
endothelium of artery | 4.55e-07 | 9 |