FFCP PHASE1:Hg19::chr12:24514958..24514967,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:24514958..24514967,- | |||
|coexpression_cluster_id=C21 | |||
|description=CAGE_peak_at_chr12:24514958..24514967,- | |||
|id=chr12:24514958..24514967,- | |||
|ontology_enrichment_celltype=CL:0000945!1.98e-42!24;CL:0000826!1.98e-42!24;CL:0000236!7.14e-39!14;CL:0000838!1.95e-30!52;CL:0000542!8.09e-30!53;CL:0000051!8.09e-30!53;CL:0000080!5.79e-24!6;CL:0002087!9.79e-14!119;CL:0000988!1.67e-12!182;CL:0000738!2.64e-11!140;CL:0002031!2.82e-11!124;CL:0000819!8.24e-10!1;CL:0000037!9.88e-09!172;CL:0000566!9.88e-09!172;CL:0002032!6.79e-08!165;CL:0000837!6.79e-08!165 | |||
|ontology_enrichment_celltype_v019=CL:0000945;1.76e-54;24!CL:0000236;5.81e-45;13!CL:0000542;1.38e-21;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.82e-54,24;CL:0000826,1.82e-54,24;CL:0000236,1.00e-41,14;CL:0000838,6.91e-25,52;CL:0000542,2.09e-24,53;CL:0000051,2.09e-24,53;CL:0000988,1.64e-12,177;CL:0002087,8.53e-11,115;CL:0002031,2.56e-10,120;CL:0000738,5.04e-09,136;CL:0002032,1.66e-07,161;CL:0000837,1.66e-07,161;CL:0000037,3.67e-07,168 | |||
|ontology_enrichment_development_v019=CL:0000051;1.38e-21;53 | |||
|ontology_enrichment_disease=DOID:0060058!9.37e-22!10;DOID:0060060!7.55e-10!1;DOID:0060061!7.55e-10!1;DOID:8691!7.55e-10!1;DOID:0060073!8.24e-10!1;DOID:8675!8.24e-10!1;DOID:2531!1.34e-07!51;DOID:0060083!1.34e-07!51 | |||
|ontology_enrichment_disease_v019=DOID:0060058;1.46e-15;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,1.43e-15,10 | |||
|ontology_enrichment_uberon=UBERON:0001154!4.85e-10!1;UBERON:0001153!4.85e-10!1;UBERON:0002372!6.33e-10!1;UBERON:0001961!6.33e-10!1;UBERON:0001744!6.33e-10!1;UBERON:0001735!6.33e-10!1;UBERON:0002171!6.91e-10!1;UBERON:0006518!6.91e-10!1;UBERON:0008949!6.91e-10!1;UBERON:0000101!6.91e-10!1;UBERON:0002167!6.91e-10!1;UBERON:0000178!1.03e-09!15;UBERON:0000179!1.03e-09!15;UBERON:0000463!1.03e-09!15;UBERON:0002363!1.07e-09!1;UBERON:0007647!1.07e-09!1;UBERON:0010115!1.07e-09!1;UBERON:0002331!9.76e-09!10;UBERON:0000358!9.76e-09!10;UBERON:0000307!9.76e-09!10;UBERON:0000091!9.76e-09!10;UBERON:0000087!9.76e-09!10;UBERON:0007806!9.76e-09!10;UBERON:0008780!9.76e-09!10;UBERON:0005728!9.76e-09!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0002331;8.44e-16;10!UBERON:0000178;9.60e-11;15!UBERON:0000179;9.60e-11;15!UBERON:0000463;9.60e-11;15!UBERON:0000478;6.41e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,8.23e-16,10;UBERON:0000358,8.23e-16,10;UBERON:0000307,8.23e-16,10;UBERON:0000091,8.23e-16,10;UBERON:0000087,8.23e-16,10;UBERON:0007010,8.23e-16,10;UBERON:0007806,8.23e-16,10;UBERON:0008780,8.23e-16,10;UBERON:0005728,8.23e-16,10;UBERON:0000178,9.44e-11,15;UBERON:0000179,9.44e-11,15;UBERON:0000463,9.44e-11,15;UBERON:0000478,6.35e-07,24 | |||
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|short_description=p@chr12:24514958..24514967,- | |||
}} | }} |
Latest revision as of 07:38, 24 July 2015
Short description: | p@chr12:24514958..24514967, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:24514958..24514967, - |
Coexpression cluster: | C21_cord_mycosis_hairy_xeroderma_adult_CD4_anaplastic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 1.82e-54 | 24 |
pro-B cell | 1.82e-54 | 24 |
B cell | 1.00e-41 | 14 |
lymphoid lineage restricted progenitor cell | 6.91e-25 | 52 |
lymphocyte | 2.09e-24 | 53 |
common lymphoid progenitor | 2.09e-24 | 53 |
hematopoietic cell | 1.64e-12 | 177 |
nongranular leukocyte | 8.53e-11 | 115 |
hematopoietic lineage restricted progenitor cell | 2.56e-10 | 120 |
leukocyte | 5.04e-09 | 136 |
hematopoietic oligopotent progenitor cell | 1.66e-07 | 161 |
hematopoietic multipotent progenitor cell | 1.66e-07 | 161 |
hematopoietic stem cell | 3.67e-07 | 168 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 8.23e-16 | 10 |
blastocyst | 8.23e-16 | 10 |
blastula | 8.23e-16 | 10 |
bilaminar disc | 8.23e-16 | 10 |
inner cell mass | 8.23e-16 | 10 |
cleaving embryo | 8.23e-16 | 10 |
connecting stalk | 8.23e-16 | 10 |
inner cell mass derived epiblast | 8.23e-16 | 10 |
extraembryonic mesoderm | 8.23e-16 | 10 |
blood | 9.44e-11 | 15 |
haemolymphatic fluid | 9.44e-11 | 15 |
organism substance | 9.44e-11 | 15 |
extraembryonic structure | 6.35e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 1.43e-15 | 10 |