FFCP PHASE1:Hg19::chr12:124665227..124665232,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:124665227..124665232,+ to FFCP PHASE1:Hg19::chr12:124665227..124665232,+: NSchange) |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:124665227..124665232,+ | |||
|description=CAGE_peak_at_chr12:124665227..124665232,+ | |||
|id=chr12:124665227..124665232,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.18e-16!254;CL:0000039!7.77e-16!7;CL:0000586!7.77e-16!7;CL:0002322!3.04e-13!5;CL:0000239!4.13e-10!3;CL:1000615!4.13e-10!3;CL:0002306!4.13e-10!3;CL:0002536!6.64e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000039;1.36e-23;7!CL:0000586;1.36e-23;7!CL:0000239;2.09e-14;3!CL:1000615;2.09e-14;3!CL:0002306;2.09e-14;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,1.28e-23,7;CL:0000586,1.28e-23,7;CL:0000239,2.09e-14,3;CL:1000615,2.09e-14,3;CL:0002306,2.09e-14,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!8.32e-11!106;DOID:0050687!1.46e-10!143;DOID:162!9.23e-10!235;DOID:14566!2.31e-09!239;DOID:3095!1.06e-07!22;DOID:2994!1.06e-07!22 | |||
|ontology_enrichment_disease_v019=DOID:3095;3.09e-08;22!DOID:2994;3.09e-08;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,3.04e-08,22;DOID:2994,3.04e-08,22 | |||
|ontology_enrichment_uberon=UBERON:0006853!4.13e-10!3;UBERON:0007685!4.13e-10!3;UBERON:0004134!4.13e-10!3;UBERON:0003886!2.08e-08!63;UBERON:0000344!1.05e-07!12;UBERON:0000058!1.13e-07!26;UBERON:0002553!3.38e-07!70;UBERON:0002394!4.15e-07!4;UBERON:0003928!4.15e-07!4;UBERON:0002294!7.79e-07!7;UBERON:0001173!7.79e-07!7;UBERON:0004912!7.79e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0006853;2.09e-14;3!UBERON:0007685;2.09e-14;3!UBERON:0004134;2.09e-14;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006853,2.09e-14,3;UBERON:0007685,2.09e-14,3;UBERON:0004134,2.09e-14,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0.436882744260345,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0,0,0.121973706129595,0.132529768321485,0.116193942869518,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0.548751427043128,0,0.703702806881416,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335964256397719,0.141775097242386,0,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0.501689773854853,0.254876273045038,0.831076008928724,1.79099803777743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449341755736634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0.179515288819544,3.58536327342627,0,0,0,0,0,0,0,0,0,0.569261198172555,0.158936578980379,0,0,0.282706142867882,0,0,0,0,0,0,0,0,0,0,0,0.586993856796269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0.171986032471617,0,0,0,0,0,0,0.274083849293502,0,0,0,0.320635281006135,0,0,0.144090417154106,0,0,0,0,0,0.67952103036807,0.523014231561666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321506296930038,0.275078873194468,0,0,0,0,0.335434687599266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,7.021753835472,0,0,0,0,0,0,0,0,0,0,0,0,0.249960815924213,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0.453411851024545,2.08370226891451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252071696221718,0,0,0,0,0,0,0.115525666150338,0,0,0,0,0,0,0.785720083444267,0.163771917510097,0.443568258651136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4582137370881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705789743431384,0,0,0,0,0,0,0,0,0,0,0,0.126166424835079,0.874124575709564,0,0.61193297845189,0.801652215796681,2.29737248837112,0.50141507858475,0,0,0,0,0,0,0,0,0.224263725161227,0,0,0,0,0,0,0,0.407016343054873,0.106727345877715,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0.436882744260345,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0,0,0.121973706129595,0.132529768321485,0.116193942869518,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0.548751427043128,0,0.703702806881416,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335964256397719,0.141775097242386,0,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0.501689773854853,0.254876273045038,0.831076008928724,1.79099803777743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449341755736634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0.179515288819544,3.58536327342627,0,0,0,0,0,0,0,0,0,0.569261198172555,0.158936578980379,0,0,0.282706142867882,0,0,0,0,0,0,0,0,0,0,0,0.586993856796269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0.171986032471617,0,0,0,0,0,0,0.274083849293502,0,0,0,0.320635281006135,0,0,0.144090417154106,0,0,0,0,0,0.67952103036807,0.523014231561666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321506296930038,0.275078873194468,0,0,0,0,0.335434687599266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,7.021753835472,0,0,0,0,0,0,0,0,0,0,0,0,0.249960815924213,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0.453411851024545,2.08370226891451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252071696221718,0,0,0,0,0,0,0.115525666150338,0,0,0,0,0,0,0.785720083444267,0.163771917510097,0.443568258651136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4582137370881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705789743431384,0,0,0,0,0,0,0,0,0,0,0,0.126166424835079,0.874124575709564,0,0.61193297845189,0.801652215796681,2.29737248837112,0.50141507858475,0,0,0,0,0,0,0,0,0.224263725161227,0,0,0,0,0,0,0,0.407016343054873,0.106727345877715,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr12:124665227..124665232,+ | |||
}} | }} |
Latest revision as of 06:22, 24 July 2015
Short description: | p@chr12:124665227..124665232, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:124665227..124665232, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 1.28e-23 | 7 |
germ cell | 1.28e-23 | 7 |
brush border epithelial cell | 2.09e-14 | 3 |
kidney cortex tubule cell | 2.09e-14 | 3 |
epithelial cell of proximal tubule | 2.09e-14 | 3 |
Ontology term | p-value | n |
---|---|---|
renal cortex tubule | 2.09e-14 | 3 |
region of nephron tubule | 2.09e-14 | 3 |
proximal tubule | 2.09e-14 | 3 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 3.04e-08 | 22 |
germ cell cancer | 3.04e-08 | 22 |