FFCP PHASE1:Hg19::chr12:111512557..111512571,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:111512557..111512571,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_at_chr12:111512557..111512571,+ | |||
|id=chr12:111512557..111512571,+ | |||
|ontology_enrichment_celltype=CL:0000840!1.21e-11!5;CL:0001029!1.21e-11!5;CL:0000181!5.70e-10!12;CL:0000417!5.70e-10!12;CL:0000668!5.70e-10!12;CL:0000414!5.70e-10!12;CL:0000412!5.70e-10!12;CL:0000182!5.70e-10!12;CL:0000990!6.44e-08!8 | |||
|ontology_enrichment_celltype_v019=CL:0000182;1.29e-15;12!CL:0000840;4.84e-14;5!CL:0000990;1.10e-09;8!CL:0000451;4.34e-08;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.29e-15,12;CL:0000840,4.24e-14,5;CL:0001029,4.24e-14,5;CL:0000990,1.01e-09,8;CL:0000451,4.04e-08,10 | |||
|ontology_enrichment_development_v019=UBERON:0004161;3.31e-08;11!UBERON:0009497;4.45e-07;13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002148!3.22e-15!2;UBERON:0009662!3.22e-15!2;UBERON:0002107!1.72e-13!19;UBERON:0006925!1.72e-13!19;UBERON:0008836!1.72e-13!19;UBERON:0008835!1.40e-11!22;UBERON:0003894!1.40e-11!22;UBERON:0009854!4.71e-11!23;UBERON:0000988!1.87e-10!3;UBERON:0006331!1.87e-10!3;UBERON:0007499!3.98e-10!25;UBERON:0009497!3.98e-10!25;UBERON:0000015!3.98e-10!25;UBERON:0002423!3.98e-10!25;UBERON:0006235!3.98e-10!25;UBERON:0004161!3.98e-10!25;UBERON:0005057!1.02e-09!26;UBERON:0009856!1.02e-09!26;UBERON:0004733!1.72e-09!12;UBERON:0002028!1.72e-09!12;UBERON:0007277!1.72e-09!12;UBERON:0004732!9.01e-09!13;UBERON:0002298!1.93e-08!8;UBERON:0001301!2.84e-08!1;UBERON:0002365!4.63e-08!31;UBERON:0002330!4.63e-08!31;UBERON:0003076!1.28e-07!15;UBERON:0003057!1.28e-07!15;UBERON:0002680!1.42e-07!9;UBERON:0001895!1.42e-07!9;UBERON:0010092!1.42e-07!9;UBERON:0002368!4.47e-07!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.79e-26;19!UBERON:0006925;2.79e-26;19!UBERON:0002423;4.88e-20;25!UBERON:0002365;3.62e-16;31!UBERON:0002330;3.62e-16;31!UBERON:0002368;5.44e-14;33!UBERON:0000949;3.22e-10;43!UBERON:0005172;1.96e-07;52!UBERON:0005173;1.96e-07;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.87e-26,19;UBERON:0006925,2.87e-26,19;UBERON:0008836,2.87e-26,19;UBERON:0008835,1.00e-22,22;UBERON:0003894,1.00e-22,22;UBERON:0009854,9.49e-22,23;UBERON:0007499,4.98e-20,25;UBERON:0009497,4.98e-20,25;UBERON:0000015,4.98e-20,25;UBERON:0002423,4.98e-20,25;UBERON:0006235,4.98e-20,25;UBERON:0004161,4.98e-20,25;UBERON:0009856,2.87e-19,26;UBERON:0002365,3.40e-16,31;UBERON:0002330,3.40e-16,31;UBERON:0002368,2.30e-14,35;UBERON:0000949,3.32e-11,45;UBERON:0003929,2.36e-09,54;UBERON:0005172,2.36e-09,54;UBERON:0005173,2.36e-09,54;UBERON:0002530,1.44e-08,59;UBERON:0002417,2.00e-08,60;UBERON:0000916,2.00e-08,60 | |||
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|short_description=p@chr12:111512557..111512571,+ | |||
}} | }} |
Latest revision as of 04:59, 24 July 2015
Short description: | p@chr12:111512557..111512571, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:111512557..111512571, + |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.29e-15 | 12 |
immature conventional dendritic cell | 4.24e-14 | 5 |
common dendritic progenitor | 4.24e-14 | 5 |
conventional dendritic cell | 1.01e-09 | 8 |
dendritic cell | 4.04e-08 | 10 |
Ontology term | p-value | n |
---|---|---|
liver | 2.87e-26 | 19 |
digestive gland | 2.87e-26 | 19 |
liver bud | 2.87e-26 | 19 |
hepatic diverticulum | 1.00e-22 | 22 |
liver primordium | 1.00e-22 | 22 |
digestive tract diverticulum | 9.49e-22 | 23 |
epithelial sac | 4.98e-20 | 25 |
epithelium of foregut-midgut junction | 4.98e-20 | 25 |
anatomical boundary | 4.98e-20 | 25 |
hepatobiliary system | 4.98e-20 | 25 |
foregut-midgut junction | 4.98e-20 | 25 |
septum transversum | 4.98e-20 | 25 |
sac | 2.87e-19 | 26 |
exocrine gland | 3.40e-16 | 31 |
exocrine system | 3.40e-16 | 31 |
endocrine gland | 2.30e-14 | 35 |
endocrine system | 3.32e-11 | 45 |
gut epithelium | 2.36e-09 | 54 |
abdomen element | 2.36e-09 | 54 |
abdominal segment element | 2.36e-09 | 54 |
gland | 1.44e-08 | 59 |
abdominal segment of trunk | 2.00e-08 | 60 |
abdomen | 2.00e-08 | 60 |