FFCP PHASE1:Hg19::chr12:111127505..111127524,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:111127505..111127524,- to FFCP PHASE1:Hg19::chr12:111127505..111127524,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=84329 | |EntrezGene=84329 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28240 | |HGNC=28240 | ||
|TSSclassifier=strong | |||
|UniProt=Q96D96 | |UniProt=Q96D96 | ||
|association_with_transcript=-283bp_to_ENST00000548312,uc001trq.1_5end | |||
|cluster_id=chr12:111127505..111127524,- | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_6_at_HVCN1_5end | |||
|id=chr12:111127505..111127524,- | |||
|ontology_enrichment_celltype=CL:0000236!4.00e-12!14;CL:0000945!2.22e-09!24;CL:0000826!2.22e-09!24 | |||
|ontology_enrichment_celltype_v019=CL:0000236;9.36e-09;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,3.42e-08,14 | |||
|ontology_enrichment_development_v019=UBERON:0005425;6.42e-13;1!UBERON:0009117;2.42e-11;10!UBERON:0005564;2.42e-11;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.35e-24!115;UBERON:0001049!8.44e-17!57;UBERON:0005068!8.44e-17!57;UBERON:0006241!8.44e-17!57;UBERON:0007135!8.44e-17!57;UBERON:0005743!8.43e-15!86;UBERON:0001017!5.37e-14!82;UBERON:0003075!7.69e-14!86;UBERON:0007284!7.69e-14!86;UBERON:0000073!2.32e-13!94;UBERON:0001016!2.32e-13!94;UBERON:0002780!4.65e-13!41;UBERON:0001890!4.65e-13!41;UBERON:0006240!4.65e-13!41;UBERON:0002346!9.86e-13!90;UBERON:0003080!1.37e-12!42;UBERON:0002020!2.84e-12!34;UBERON:0003528!2.84e-12!34;UBERON:0002616!3.79e-12!59;UBERON:0002791!2.75e-11!33;UBERON:0000955!7.29e-11!69;UBERON:0006238!7.29e-11!69;UBERON:0001893!8.43e-11!34;UBERON:0003056!6.01e-10!61;UBERON:0001869!6.34e-09!32;UBERON:0002308!2.94e-08!9;UBERON:0000125!2.94e-08!9;UBERON:0002619!5.61e-08!22;UBERON:0003135!6.94e-08!11;UBERON:0001950!1.56e-07!20;UBERON:0002298!7.22e-07!8;UBERON:0000473!8.90e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;4.94e-14;8!UBERON:0002038;6.42e-13;1!UBERON:0000941;6.42e-13;1!UBERON:0001785;6.42e-13;1!UBERON:0002464;6.42e-13;1!UBERON:0004904;6.42e-13;1!UBERON:0001021;6.42e-13;1!UBERON:0009661;6.42e-13;1!UBERON:0002950;6.42e-13;1!UBERON:0001891;6.42e-13;1!UBERON:0000125;3.61e-12;9!UBERON:0002308;3.61e-12;9!UBERON:0003135;2.32e-10;11!UBERON:0009663;1.52e-07;7!UBERON:0001897;2.82e-07;2!UBERON:0010225;2.82e-07;2!UBERON:0002148;4.29e-07;2!UBERON:0003714;4.29e-07;2!UBERON:0001875;4.29e-07;2!UBERON:0005162;4.29e-07;2!UBERON:0000122;4.29e-07;2!UBERON:0006331;4.29e-07;2!UBERON:0009662;4.29e-07;2!UBERON:0006514;4.29e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,5.28e-14,8;UBERON:0000941,3.76e-13,1;UBERON:0001785,3.76e-13,1;UBERON:0002464,3.76e-13,1;UBERON:0004904,3.76e-13,1;UBERON:0001021,3.76e-13,1;UBERON:0003902,3.76e-13,1;UBERON:0005425,3.76e-13,1;UBERON:0002038,1.09e-12,1;UBERON:0009661,1.09e-12,1;UBERON:0002950,1.09e-12,1;UBERON:0001891,1.09e-12,1;UBERON:0009616,1.09e-12,1;UBERON:0010286,1.09e-12,1;UBERON:0000125,3.41e-12,9;UBERON:0002308,3.41e-12,9;UBERON:0003135,2.43e-10,11;UBERON:0009663,1.63e-07,7;UBERON:0001897,3.09e-07,2;UBERON:0010225,3.09e-07,2;UBERON:0003714,3.28e-07,2;UBERON:0005162,3.28e-07,2;UBERON:0000122,3.28e-07,2;UBERON:0002148,3.48e-07,2;UBERON:0006331,3.48e-07,2;UBERON:0009662,3.48e-07,2;UBERON:0001875,3.70e-07,2;UBERON:0006514,3.70e-07,2 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0.382067028739756,0.0821005894499457,0.236132343941038,0,0,0.309632246632152,0,0,0,0,0,0,0,0,0.217010870715852,0.447830948479849,0.971680998056939,0,0,0.377875943688809,0,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0,0.209658645508376,0.112328631146495,0.150176892841506,0.32145117339416,0,0,0.182664153764634,0,0.546138611262131,0.889509253863555,2.56038133539904,0.800791974072025,1.14950487990897,0,2.86216126360609,0.569212969109448,0.587237189370939,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0.127986611154418,0,0.236777252044017,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0.0945348171640679,0.221729397462564,0,3.47094550068939,0,0,0,0,0,0.238490624305342,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0.121973706129595,0.927708378250397,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0.144366447761074,0,0,0,0,0.246217006087397,0.234004265139238,0.148631162288728,0,0,0,0,0,0,0,0,0.414656231081544,0,0.12624243342638,0,0.381988425558278,0,0,0,0,0,0,0,0.1466765716419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0.502257091432126,0,0,0,0,0,0,0,0,0,0.215627574859517,0.128343036279748,0.508189248444927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173767228936166,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,1.08890984861323,0,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0.79312517629427,0,0,0.245040215981032,0,0.28853842595289,0,0.159426272728822,0.399158742865633,0.191505370132367,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422008249231538,0,0,0,0,0.552567831062295,0,0,0,0,0,0,1.02314474045374,0,0,0,0.969332746095218,0.278304294485554,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0.241192877250816,0,0,0,0.658156191461918,0,0,0.230850775511391,0,0,0,0,0,0,0,1.02193298195737,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606610196826093,0,0.702793337176017,0,0,0,0,0,0.61214552326098,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0.171986032471617,0,0,0,0,0,0,0,0,0.316553979779393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20084057741958,0.821432273351958,0,0,0,0.279282401272254,0,0,0,0,0.223171457441873,0.0671834724867263,0,0,0,0,0,0,0,0,0.544813624446302,0,0.137539436597234,0,0,0,0.0607495566580247,0,0,0.157363764404994,0,2.51002275065983,0,0,0.662091970365432,0,0,0,0,0,0,0,0,0,0,1.29282956361551,0.39669780522807,0,0,0,0.314408610199332,0.414239055347196,0,0,0,0,0.544017803369474,0,0,0,0,0,0,0,0,0.665574309221114,0.496771223531068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521745061811734,0,0.761610424337591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0.159633859057151,0.205116364240755,0.252071696221718,0.207471757392654,0,1.42769420259154,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0.147856086217045,0,0,0.206686796501184,0.126831620387814,0,0,0.496211178389294,0,0,0,0.336283722218824,0,0,0,0.345701962667338,0,0.339848664884159,0.131545547125698,0,0,0.156986185701028,0,0,0,0,0,0.285906176706625,0,0,0,0,0,0,0,0.430227358820278,0,0,0.423387050190929,0,0,0,0,0,0,0,0.205325613712494,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0.392616934229891,1.18818560130834,0.4226557275834,0.169927114687817,0.0939839179798536,0.128915775947154,0,0,0,0,0,0,1.00337708206016,0,0.339957450954573,0,0,0,0,0,0.378499274505237,0,0,0,1.06886962106224,0.0918948995348449,0.752122617877125,8.86610769153401,12.058385857028,2.48750831837634,0.310298987585686,0,0,0,0,0,0,0,0,0,0.202056159043763,0,0,0,0,0,0,0,0.244482888365733,0.406896178315738,0,0.201273793591026,0 | |phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0.382067028739756,0.0821005894499457,0.236132343941038,0,0,0.309632246632152,0,0,0,0,0,0,0,0,0.217010870715852,0.447830948479849,0.971680998056939,0,0,0.377875943688809,0,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0,0.209658645508376,0.112328631146495,0.150176892841506,0.32145117339416,0,0,0.182664153764634,0,0.546138611262131,0.889509253863555,2.56038133539904,0.800791974072025,1.14950487990897,0,2.86216126360609,0.569212969109448,0.587237189370939,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0.127986611154418,0,0.236777252044017,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0.0945348171640679,0.221729397462564,0,3.47094550068939,0,0,0,0,0,0.238490624305342,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0.121973706129595,0.927708378250397,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0.144366447761074,0,0,0,0,0.246217006087397,0.234004265139238,0.148631162288728,0,0,0,0,0,0,0,0,0.414656231081544,0,0.12624243342638,0,0.381988425558278,0,0,0,0,0,0,0,0.1466765716419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0.502257091432126,0,0,0,0,0,0,0,0,0,0.215627574859517,0.128343036279748,0.508189248444927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173767228936166,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,1.08890984861323,0,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0.79312517629427,0,0,0.245040215981032,0,0.28853842595289,0,0.159426272728822,0.399158742865633,0.191505370132367,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422008249231538,0,0,0,0,0.552567831062295,0,0,0,0,0,0,1.02314474045374,0,0,0,0.969332746095218,0.278304294485554,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0.241192877250816,0,0,0,0.658156191461918,0,0,0.230850775511391,0,0,0,0,0,0,0,1.02193298195737,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606610196826093,0,0.702793337176017,0,0,0,0,0,0.61214552326098,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0.171986032471617,0,0,0,0,0,0,0,0,0.316553979779393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20084057741958,0.821432273351958,0,0,0,0.279282401272254,0,0,0,0,0.223171457441873,0.0671834724867263,0,0,0,0,0,0,0,0,0.544813624446302,0,0.137539436597234,0,0,0,0.0607495566580247,0,0,0.157363764404994,0,2.51002275065983,0,0,0.662091970365432,0,0,0,0,0,0,0,0,0,0,1.29282956361551,0.39669780522807,0,0,0,0.314408610199332,0.414239055347196,0,0,0,0,0.544017803369474,0,0,0,0,0,0,0,0,0.665574309221114,0.496771223531068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521745061811734,0,0.761610424337591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0.159633859057151,0.205116364240755,0.252071696221718,0.207471757392654,0,1.42769420259154,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0.147856086217045,0,0,0.206686796501184,0.126831620387814,0,0,0.496211178389294,0,0,0,0.336283722218824,0,0,0,0.345701962667338,0,0.339848664884159,0.131545547125698,0,0,0.156986185701028,0,0,0,0,0,0.285906176706625,0,0,0,0,0,0,0,0.430227358820278,0,0,0.423387050190929,0,0,0,0,0,0,0,0.205325613712494,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0.392616934229891,1.18818560130834,0.4226557275834,0.169927114687817,0.0939839179798536,0.128915775947154,0,0,0,0,0,0,1.00337708206016,0,0.339957450954573,0,0,0,0,0,0.378499274505237,0,0,0,1.06886962106224,0.0918948995348449,0.752122617877125,8.86610769153401,12.058385857028,2.48750831837634,0.310298987585686,0,0,0,0,0,0,0,0,0,0.202056159043763,0,0,0,0,0,0,0,0.244482888365733,0.406896178315738,0,0.201273793591026,0 | ||
|short_description=p6@HVCN1 | |||
}} | }} |
Latest revision as of 09:05, 16 September 2015
Short description: | p6@HVCN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_HVCN1_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | -283bp_to_ENST00000548312, uc001trq.1_5end |
EntrezGene: | HVCN1 |
HGNC: | 28240 |
UniProt: | Q96D96 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 3.42e-08 | 14 |
Ontology term | p-value | n |
---|---|---|
testis | 5.28e-14 | 8 |
cranial nerve II | 3.76e-13 | 1 |
cranial nerve | 3.76e-13 | 1 |
nerve trunk | 3.76e-13 | 1 |
nerve connecting eye with brain | 3.76e-13 | 1 |
nerve | 3.76e-13 | 1 |
retinal neural layer | 3.76e-13 | 1 |
presumptive neural retina | 3.76e-13 | 1 |
substantia nigra | 1.09e-12 | 1 |
midbrain nucleus | 1.09e-12 | 1 |
regional part of midbrain | 1.09e-12 | 1 |
midbrain | 1.09e-12 | 1 |
presumptive midbrain | 1.09e-12 | 1 |
midbrain neural tube | 1.09e-12 | 1 |
neural nucleus | 3.41e-12 | 9 |
nucleus of brain | 3.41e-12 | 9 |
male reproductive organ | 2.43e-10 | 11 |
telencephalic nucleus | 1.63e-07 | 7 |
dorsal plus ventral thalamus | 3.09e-07 | 2 |
thalamic complex | 3.09e-07 | 2 |
neural tissue | 3.28e-07 | 2 |
multi cell component structure | 3.28e-07 | 2 |
neuron projection bundle | 3.28e-07 | 2 |
locus ceruleus | 3.48e-07 | 2 |
brainstem nucleus | 3.48e-07 | 2 |
hindbrain nucleus | 3.48e-07 | 2 |
globus pallidus | 3.70e-07 | 2 |
pallidum | 3.70e-07 | 2 |