FFCP PHASE1:Hg19::chr12:109195509..109195513,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:109195509..109195513,- to FFCP PHASE1:Hg19::chr12:109195509..109195513,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:109195509..109195513,- | |||
|description=CAGE_peak_at_chr12:109195509..109195513,- | |||
|id=chr12:109195509..109195513,- | |||
|ontology_enrichment_celltype=CL:0000860!9.41e-11!45;CL:0002057!1.38e-10!42;CL:0002194!3.37e-10!63;CL:0000576!3.37e-10!63;CL:0000040!3.37e-10!63;CL:0000559!3.37e-10!63;CL:0002009!6.71e-10!65;CL:0000557!3.48e-09!71;CL:0000766!4.71e-09!76;CL:0000839!4.75e-09!70;CL:0002087!2.96e-07!119;CL:0000738!6.11e-07!140 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.58e-11;33!CL:0002057;4.58e-11;33!CL:0000576;4.37e-08;48!CL:0000473;4.79e-08;39!CL:0000234;4.79e-08;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,1.21e-11,59;CL:0000576,1.21e-11,59;CL:0000040,1.21e-11,59;CL:0000559,1.21e-11,59;CL:0000860,1.24e-11,42;CL:0002057,1.24e-11,42;CL:0002009,3.33e-11,61;CL:0000766,3.91e-11,72;CL:0000839,3.20e-10,66;CL:0000557,4.83e-10,67;CL:0000473,5.32e-10,48;CL:0000234,5.32e-10,48;CL:0000763,5.10e-08,108;CL:0000049,5.10e-08,108;CL:0000738,5.67e-07,136 | |||
|ontology_enrichment_development_v019=CL:0002057;3.13e-09;42!UBERON:0003099;5.03e-08;1!UBERON:0003852;5.03e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:6193;5.03e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:6193,1.14e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0001474!8.02e-09!86;UBERON:0002371!4.86e-08!80;UBERON:0002390!5.45e-08!102;UBERON:0003061!5.45e-08!102;UBERON:0002193!7.75e-08!112;UBERON:0004765!5.27e-07!101;UBERON:0001434!5.27e-07!101 | |||
|ontology_enrichment_uberon_v019=UBERON:0001282;5.03e-08;1!UBERON:0004913;5.03e-08;1!UBERON:0005705;5.03e-08;1!UBERON:0009842;5.03e-08;1!UBERON:0003703;5.03e-08;1!UBERON:0003704;5.03e-08;1!UBERON:0008193;5.03e-08;1!UBERON:0010912;5.03e-08;1!UBERON:0002514;5.03e-08;1!UBERON:0003457;5.03e-08;1!UBERON:0008907;5.03e-08;1!UBERON:0008001;5.03e-08;1!UBERON:0007213;5.03e-08;1!UBERON:0009891;5.03e-08;1!UBERON:0007914;5.03e-08;1!UBERON:0007375;5.03e-08;1!UBERON:0003323;5.03e-08;1!UBERON:0010258;5.03e-08;1!UBERON:0005253;5.03e-08;1!UBERON:0007842;5.03e-08;1!UBERON:0001171;5.03e-08;1!UBERON:0001172;5.03e-08;1!UBERON:0002397;5.03e-08;1!UBERON:0003113;5.03e-08;1!UBERON:0003277;5.03e-08;1!UBERON:0001709;5.03e-08;1!UBERON:0001174;5.03e-08;1!UBERON:0004914;5.03e-08;1!UBERON:0002244;5.03e-08;1!UBERON:0005620;5.03e-08;1!UBERON:0010364;5.03e-08;1!UBERON:0004288;5.03e-08;1!UBERON:0002394;1.30e-07;4!UBERON:0003928;1.30e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.95e-09,108;UBERON:0001474,1.96e-09,82;UBERON:0002390,4.38e-09,98;UBERON:0003061,4.38e-09,98;UBERON:0002371,1.22e-08,76;UBERON:0004765,2.06e-08,90;UBERON:0001282,3.11e-08,1;UBERON:0009842,3.11e-08,1;UBERON:0003704,3.11e-08,1;UBERON:0001171,3.11e-08,1;UBERON:0001172,3.11e-08,1;UBERON:0002405,4.29e-08,93;UBERON:0005705,8.69e-08,1;UBERON:0008193,8.69e-08,1;UBERON:0010912,8.69e-08,1;UBERON:0002514,8.69e-08,1;UBERON:0003457,8.69e-08,1;UBERON:0008907,8.69e-08,1;UBERON:0008001,8.69e-08,1;UBERON:0007213,8.69e-08,1;UBERON:0009891,8.69e-08,1;UBERON:0007914,8.69e-08,1;UBERON:0009292,8.69e-08,1;UBERON:0003099,8.69e-08,1;UBERON:0007375,8.69e-08,1;UBERON:0003323,8.69e-08,1;UBERON:0010258,8.69e-08,1;UBERON:0007842,8.69e-08,1;UBERON:0009494,8.69e-08,1;UBERON:0010042,8.69e-08,1;UBERON:0010045,8.69e-08,1;UBERON:0010259,8.69e-08,1;UBERON:0010359,8.69e-08,1;UBERON:0009526,8.69e-08,1;UBERON:0002397,8.69e-08,1;UBERON:0003113,8.69e-08,1;UBERON:0003277,8.69e-08,1;UBERON:0001709,8.69e-08,1;UBERON:0004066,8.69e-08,1;UBERON:0002244,8.69e-08,1;UBERON:0005620,8.69e-08,1;UBERON:0004362,8.69e-08,1;UBERON:0010364,8.69e-08,1;UBERON:0010046,8.69e-08,1;UBERON:0005868,8.69e-08,1;UBERON:0007238,8.69e-08,1;UBERON:0004288,8.69e-08,1;UBERON:0004068,8.69e-08,1;UBERON:0010334,8.69e-08,1;UBERON:0003852,8.69e-08,1;UBERON:0010253,8.69e-08,1;UBERON:0004913,1.06e-07,1;UBERON:0003703,1.06e-07,1;UBERON:0001174,1.06e-07,1;UBERON:0004914,1.06e-07,1;UBERON:0001434,2.30e-07,100 | |||
|phase1_expression=0.363356758541113,0,0.140954404095971,0,0,0,0,0,0,0.245733936501509,0,0.218441372130172,0.263766978228454,0,0,0,0,0.730310090387373,0.487932798790507,0.123121058076788,0,0,0.286235987131057,0.136874425072884,0.125542639594803,0.305653622991805,0.246301768349837,0.157421562627358,0,0.383829398097213,0.464448369948228,0,0.30120591877825,0,0.0774672005803016,0.142169232487422,0,1.10799081706375,0.601633342410425,0.868043482863407,0.447830948479849,0,0,0.290796477559129,0,0.970336244751265,1.16214518452842,0.822335776043652,1.85823822537062,0.28769239232215,0.512321413058201,0.945928919554341,0.689491361473237,0.645484683583826,0,1.12945403725563,1.63743690034707,0,0.918251677112708,0.320929027076094,0.639337125799041,0.989553900560148,1.59570926097305,1.70489900213078,0.580418477257168,0.56738522469114,0,2.00998932205395,1.0429658368404,0.217188844705117,0.605399502633369,0,0,0,0.212604299965044,0,0.22465726229299,0.600707571366025,0,0.285012743741249,0.19891667719909,0.365328307529268,0,0.546138611262131,0,0.853460445133014,0,0,0,0,0,0,0.764546456250458,0,0,0,0,0.393010762749165,0.205601498999509,0,0.32592226663359,0,0,0.111410456885174,0,0,0,0,0.390178042679635,0,0,0,0,0,0,0.339928028092699,0,0,0,0.318565414324097,0,0,0,0,0,0,0,0.201606743224732,1.33720097891754,0.289648807765598,0,0,0,0,0,0.144846518960824,0,0.486634870302636,0.283604451492204,0.221729397462564,0.43917392846563,0.130979075497713,0,0.370784442784429,0.324547393654683,0.174129737299267,0.26591592103773,1.43094374583205,0,0,0,0,0.347140501607594,0,0,0,0,0,0.35576626268671,0,0,0.760272105718513,0,0,0.81014194788176,0.267899184852239,0.22452937262617,0,0,0,0,0,0,0,0.496971951695318,0,0.794455084879313,0,0,0,0,0,0,0,0,0,0,0,0,0,0.298897361103602,0.117434498643765,0,0.140450806702248,0.204154171254893,0.245668634623536,0,0,0.247266929278557,0,0,0.168336113954066,0.125118519871964,0,0.438977620880838,0.919463387397059,0.150238058906597,0.453728732640084,0.358779271377724,0.213557388818567,0,0,0.206105058476878,0,0.37223371266318,0.506328996723799,0.0974370051611986,0,0.0920498986422993,0,0.710019185033229,0,0,0,0.272746120590835,0,0,0.265059536642971,0,0,0.504641701751257,0,0,0,0,0.464367928031979,0,0.118306800039844,0,0,0.110293972732394,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0.201057944823262,0.185176890317059,0,0,0,0,0,0.433099343283221,0.462985512576611,1.14152491340759,0,0,0.738651018262192,0.234004265139238,0,0,0,0.141775097242386,0.0895585227028483,0,0,0,0.264145302039678,0,0.432359860250884,0.12624243342638,0,0,0,0,0.205654985406647,0.600686115687835,0,0,0,0.1466765716419,0.387815147273333,0,0,0,0,0.257207374262142,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0.144781306667579,0,0.179060963239896,0,0.788123040807709,0.646882724578552,0.385029108839245,0,0,0.773288812777695,0,0,0,5.9832291840805,0,0,0,0,0.623912584592421,0.713715955188647,0.315404830067869,0.468565659970853,0,0,0,0,0,0.173767228936166,0.195801157462741,0,0.206768026122887,0,0.320182673410333,0,0,0.30239029332968,0.248107807818777,0,0.280660094433074,0.128139149255701,0,0,0,0.154209693802656,0,0.0821271560138091,0,0,0.120859449591622,0,0.0920809889358963,0,0,0.131124414959424,0,0,0,0,0.211103257785751,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0.27470839445503,0.247528499761764,0,0,0,0,0.154048617114644,0.15350367472613,0.275673144969061,0.429680979473094,0.435050081742686,0.0852266274161009,0.267096106940212,0.330569830721956,0.192190067365106,0.893288987462089,0.10115778085555,0,0.31481234683064,0.6970372701606,0.308033580176089,0,0,0,0.143124886741991,0.744316738719335,0.632758849437452,0,0,0,0,0,0.179872457583315,0,0.235624804691373,0,0,0,0,0.487426979262569,0,0,0,0,0,0,0.438450885253763,0.578775534266688,0.655894752046633,0,0.30982349809975,0.281695602532241,0,0.196498082026242,0,0.354761064070598,0,0,0,0,0.0962221127255121,0,0,0.188287601553558,0.43050537267123,0,0.443430153536676,0.689170200620878,0,0,0.569647187174163,0,0.822724546172388,0,0,1.58625035258854,0.106824071127473,0,0.490080431962063,0.185803175125719,0.28853842595289,0.142283686696828,0,0.199579371432817,0,0.423347165447766,0,0,0.228234679033192,0,0,0,0.321176150207399,0.201799707191048,0.425846237690326,0.343505344755765,0.307240764308458,0,0.333698283423817,0,0,0,0,0,0,0,0.146508179271894,0,0.222886768554957,1.13654458722565,0,0.296964680832639,0,0.994147647766298,0.422008249231538,0.556543525114529,0.329607748453519,0.63337622438398,0.597743964753209,0.276283915531148,0.251932747854276,0.306806047506464,0,0,0.269605053441981,0,0,0,2.3948309234694,0,0,0.0927680981618513,0,0.520855522170466,0.0874599999961957,0,0.455173793141999,0.254253650292766,0,0.344743373241465,1.74962768029953,0.694499979733169,0,0.241192877250816,0,0.442317039724898,0.295547618953547,0.219385397153973,0,0,0.153900517007594,1.59518878185802,0.23056390438806,0.448788222048861,0.325942115766024,0,0.0915975934018623,0,0,0,0,0,0.19606253431774,0,0.189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| ||
|short_description=p@chr12:109195509..109195513,- | |||
}} | }} |
Latest revision as of 04:40, 24 July 2015
Short description: | p@chr12:109195509..109195513, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:109195509..109195513, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 1.21e-11 | 59 |
monocyte | 1.21e-11 | 59 |
monoblast | 1.21e-11 | 59 |
promonocyte | 1.21e-11 | 59 |
classical monocyte | 1.24e-11 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.24e-11 | 42 |
macrophage dendritic cell progenitor | 3.33e-11 | 61 |
myeloid leukocyte | 3.91e-11 | 72 |
myeloid lineage restricted progenitor cell | 3.20e-10 | 66 |
granulocyte monocyte progenitor cell | 4.83e-10 | 67 |
defensive cell | 5.32e-10 | 48 |
phagocyte | 5.32e-10 | 48 |
myeloid cell | 5.10e-08 | 108 |
common myeloid progenitor | 5.10e-08 | 108 |
leukocyte | 5.67e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 1.14e-07 | 1 |