FFCP PHASE1:Hg19::chr11:94528140..94528188,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:94528140..94528188,+ to FFCP PHASE1:Hg19::chr11:94528140..94528188,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:94528140..94528188,+ | |||
|description=CAGE_peak_at_chr11:94528140..94528188,+ | |||
|id=chr11:94528140..94528188,+ | |||
|ontology_enrichment_celltype=CL:0000055!6.08e-33!180;CL:0000192!4.56e-19!42;CL:0000514!4.56e-19!42;CL:0000680!1.66e-18!57;CL:0000056!1.66e-18!57;CL:0000355!1.66e-18!57;CL:0000359!8.24e-18!32;CL:0000183!5.07e-17!59;CL:0000187!5.59e-17!54;CL:0000057!4.64e-16!75;CL:0000393!1.23e-13!60;CL:0000211!1.23e-13!60;CL:0000222!3.68e-13!119;CL:0000220!3.59e-10!246;CL:0002620!5.65e-10!23;CL:0002321!6.38e-10!248;CL:0002371!1.01e-07!591;CL:0002539!7.59e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0000359;3.32e-24;32!CL:0000192;1.88e-18;43!CL:0002620;9.30e-13;23!CL:0002539;2.78e-09;10!CL:0000187;5.99e-09;55!CL:0000048;3.57e-08;58!CL:0000134;5.58e-08;55!CL:0000057;1.64e-07;73!CL:0000723;4.39e-07;61!CL:0002320;5.11e-07;188!CL:0000393;7.14e-07;61!CL:0000211;7.14e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,3.13e-26,43;CL:0000514,3.13e-26,43;CL:0000359,8.06e-26,32;CL:0000680,1.23e-20,58;CL:0000056,1.23e-20,58;CL:0000355,1.23e-20,58;CL:0000187,1.59e-18,55;CL:0000057,2.32e-16,76;CL:0000393,2.49e-15,61;CL:0000211,2.49e-15,61;CL:0000048,1.14e-14,427;CL:0000723,2.76e-14,433;CL:0000222,6.76e-14,121;CL:0000034,2.98e-13,441;CL:0002620,1.41e-12,23;CL:0002539,1.86e-09,10;CL:0002321,1.16e-07,250 | |||
|ontology_enrichment_development_v019=CL:0000514;1.88e-18;43!CL:0000355;1.66e-09;58 | |||
|ontology_enrichment_disease=DOID:2394!4.99e-09!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;3.31e-13;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,3.18e-13,14 | |||
|ontology_enrichment_uberon=UBERON:0002049!1.21e-22!79;UBERON:0007798!1.21e-22!79;UBERON:0000914!9.36e-22!83;UBERON:0002329!9.36e-22!83;UBERON:0003077!9.36e-22!83;UBERON:0003059!9.36e-22!83;UBERON:0007282!9.36e-22!83;UBERON:0009618!9.36e-22!83;UBERON:0007285!9.36e-22!83;UBERON:0001981!7.98e-21!60;UBERON:0007500!7.98e-21!60;UBERON:0004537!7.98e-21!60;UBERON:0006965!7.98e-21!60;UBERON:0004290!1.66e-20!70;UBERON:0001637!1.98e-20!42;UBERON:0003509!1.98e-20!42;UBERON:0004572!1.98e-20!42;UBERON:0001134!3.80e-18!61;UBERON:0002036!3.80e-18!61;UBERON:0003082!3.80e-18!61;UBERON:0002385!6.00e-18!63;UBERON:0001015!6.00e-18!63;UBERON:0000383!6.00e-18!63;UBERON:0004872!1.57e-17!84;UBERON:0004535!2.17e-17!110;UBERON:0000055!2.90e-17!69;UBERON:0001009!3.67e-17!113;UBERON:0004573!1.76e-16!33;UBERON:0004571!1.76e-16!33;UBERON:0000486!3.22e-16!82;UBERON:0003914!4.70e-13!118;UBERON:0000490!8.87e-13!138;UBERON:0005256!1.36e-12!143;UBERON:0000475!1.99e-12!365;UBERON:0000119!4.73e-10!312;UBERON:0000947!4.78e-10!21;UBERON:0010191!4.78e-10!21;UBERON:0003102!1.60e-09!95;UBERON:0000483!4.31e-09!309;UBERON:0002199!6.16e-09!45;UBERON:0002416!6.16e-09!45;UBERON:0002100!1.19e-08!216;UBERON:0002097!7.83e-08!40;UBERON:0004237!7.59e-07!10;UBERON:0004695!7.59e-07!10;UBERON:0002111!7.59e-07!10;UBERON:0004178!7.59e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;3.16e-22;33!UBERON:0004571;3.16e-22;33!UBERON:0001637;4.40e-21;42!UBERON:0003509;4.40e-21;42!UBERON:0004572;4.40e-21;42!UBERON:0000947;1.19e-14;21!UBERON:0010191;1.19e-14;21!UBERON:0007500;4.44e-14;56!UBERON:0001981;4.44e-14;56!UBERON:0004537;4.44e-14;56!UBERON:0002049;5.22e-12;75!UBERON:0007798;5.22e-12;75!UBERON:0000055;8.64e-10;65!UBERON:0004237;2.78e-09;10!UBERON:0004695;2.78e-09;10!UBERON:0002111;2.78e-09;10!UBERON:0004178;2.78e-09;10!UBERON:0006876;3.22e-08;11!UBERON:0003914;1.78e-07;74!UBERON:0001009;4.18e-07;112!UBERON:0004535;4.42e-07;109!UBERON:0002199;4.65e-07;46!UBERON:0002416;4.65e-07;46!UBERON:0002097;6.06e-07;41 | |||
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| ||
|short_description=p@chr11:94528140..94528188,+ | |||
}} | }} |
Latest revision as of 03:40, 24 July 2015
Short description: | p@chr11:94528140..94528188, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:94528140..94528188, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 3.13e-26 | 43 |
smooth muscle myoblast | 3.13e-26 | 43 |
vascular associated smooth muscle cell | 8.06e-26 | 32 |
muscle precursor cell | 1.23e-20 | 58 |
myoblast | 1.23e-20 | 58 |
multi-potent skeletal muscle stem cell | 1.23e-20 | 58 |
muscle cell | 1.59e-18 | 55 |
fibroblast | 2.32e-16 | 76 |
electrically responsive cell | 2.49e-15 | 61 |
electrically active cell | 2.49e-15 | 61 |
multi fate stem cell | 1.14e-14 | 427 |
somatic stem cell | 2.76e-14 | 433 |
mesodermal cell | 6.76e-14 | 121 |
stem cell | 2.98e-13 | 441 |
skin fibroblast | 1.41e-12 | 23 |
aortic smooth muscle cell | 1.86e-09 | 10 |
embryonic cell | 1.16e-07 | 250 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 3.18e-13 | 14 |