FFCP PHASE1:Hg19::chr11:89956204..89956225,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:89956204..89956225,- to FFCP PHASE1:Hg19::chr11:89956204..89956225,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=26973 | |EntrezGene=26973 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14525 | |HGNC=14525 | ||
|TSSclassifier=strong | |||
|UniProt=E9PSD5 | |UniProt=E9PSD5 | ||
|association_with_transcript=0bp_to_ENST00000533724,ENST00000533772_5end | |||
|cluster_id=chr11:89956204..89956225,- | |||
|description=CAGE_peak_1_at_CHORDC1_5end | |||
|id=chr11:89956204..89956225,- | |||
|ontology_enrichment_celltype=CL:0002032!6.01e-23!165;CL:0000837!6.01e-23!165;CL:0000037!1.19e-22!172;CL:0000566!1.19e-22!172;CL:0000988!1.62e-20!182;CL:0002031!5.73e-18!124;CL:0000738!4.64e-17!140;CL:0002087!1.43e-15!119;CL:0000542!6.27e-12!53;CL:0000051!6.27e-12!53;CL:0000838!1.49e-11!52;CL:0000763!1.55e-11!112;CL:0000049!1.55e-11!112;CL:0000860!2.41e-09!45;CL:0002057!3.59e-08!42;CL:0000839!3.59e-07!70;CL:0000557!5.35e-07!71 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.72e-08;33!CL:0002057;1.72e-08;33!CL:0000542;3.02e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0002032,3.37e-22,161;CL:0000837,3.37e-22,161;CL:0000037,6.71e-22,168;CL:0000988,2.56e-20,177;CL:0002031,2.80e-17,120;CL:0000738,2.25e-16,136;CL:0002087,6.63e-15,115;CL:0000542,6.27e-12,53;CL:0000051,6.27e-12,53;CL:0000838,1.49e-11,52;CL:0000763,6.41e-11,108;CL:0000049,6.41e-11,108;CL:0000860,3.59e-08,42;CL:0002057,3.59e-08,42 | |||
|ontology_enrichment_development_v019=CL:0000051;3.02e-07;53 | |||
|ontology_enrichment_disease=DOID:162!6.17e-15!235;DOID:14566!1.38e-14!239;DOID:2531!5.21e-10!51;DOID:0060083!5.21e-10!51;DOID:305!9.91e-09!106;DOID:1240!1.05e-08!39;DOID:0050687!4.94e-08!143;DOID:0050686!5.94e-07!137;DOID:8692!5.94e-07!31 | |||
|ontology_enrichment_disease_v019=DOID:1240;1.61e-07;39!DOID:8692;8.34e-07;31 | |||
|ontology_enrichment_disease_v019_2=DOID:162,6.17e-15,235;DOID:14566,1.38e-14,239;DOID:2531,5.21e-10,51;DOID:0060083,5.21e-10,51;DOID:305,9.91e-09,106;DOID:1240,1.05e-08,39;DOID:0050687,4.94e-08,143;DOID:0050686,5.94e-07,137;DOID:8692,5.94e-07,31 | |||
|ontology_enrichment_uberon=UBERON:0001049!1.19e-10!57;UBERON:0005068!1.19e-10!57;UBERON:0006241!1.19e-10!57;UBERON:0007135!1.19e-10!57;UBERON:0003080!1.16e-09!42;UBERON:0002780!3.16e-09!41;UBERON:0001890!3.16e-09!41;UBERON:0006240!3.16e-09!41;UBERON:0001017!2.59e-08!82;UBERON:0002616!3.00e-08!59;UBERON:0000073!5.56e-08!94;UBERON:0001016!5.56e-08!94;UBERON:0002020!1.15e-07!34;UBERON:0003528!1.15e-07!34;UBERON:0000955!1.70e-07!69;UBERON:0006238!1.70e-07!69;UBERON:0005743!2.04e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;4.28e-07;41!UBERON:0001890;4.28e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,3.10e-10,56;UBERON:0005068,3.10e-10,56;UBERON:0006241,3.10e-10,56;UBERON:0007135,3.10e-10,56;UBERON:0000073,1.61e-09,53;UBERON:0002616,1.61e-09,53;UBERON:0002780,3.16e-09,41;UBERON:0001890,3.16e-09,41;UBERON:0003080,3.16e-09,41;UBERON:0006240,3.16e-09,41;UBERON:0001016,1.57e-08,89;UBERON:0001017,5.64e-08,81;UBERON:0003528,1.15e-07,34;UBERON:0002020,1.15e-07,34;UBERON:0000955,3.72e-07,68;UBERON:0006238,3.72e-07,68;UBERON:0002791,7.80e-07,32 | |||
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| ||
|short_description=p1@CHORDC1 | |||
}} | }} |
Latest revision as of 00:41, 25 September 2015
Short description: | p1@CHORDC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CHORDC1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000533724, ENST00000533772_5end |
EntrezGene: | CHORDC1 |
HGNC: | 14525 |
UniProt: | E9PSD5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic oligopotent progenitor cell | 3.37e-22 | 161 |
hematopoietic multipotent progenitor cell | 3.37e-22 | 161 |
hematopoietic stem cell | 6.71e-22 | 168 |
hematopoietic cell | 2.56e-20 | 177 |
hematopoietic lineage restricted progenitor cell | 2.80e-17 | 120 |
leukocyte | 2.25e-16 | 136 |
nongranular leukocyte | 6.63e-15 | 115 |
lymphocyte | 6.27e-12 | 53 |
common lymphoid progenitor | 6.27e-12 | 53 |
lymphoid lineage restricted progenitor cell | 1.49e-11 | 52 |
myeloid cell | 6.41e-11 | 108 |
common myeloid progenitor | 6.41e-11 | 108 |
classical monocyte | 3.59e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.59e-08 | 42 |
Ontology term | p-value | n |
---|---|---|
neural tube | 3.10e-10 | 56 |
neural rod | 3.10e-10 | 56 |
future spinal cord | 3.10e-10 | 56 |
neural keel | 3.10e-10 | 56 |
regional part of nervous system | 1.61e-09 | 53 |
regional part of brain | 1.61e-09 | 53 |
regional part of forebrain | 3.16e-09 | 41 |
forebrain | 3.16e-09 | 41 |
anterior neural tube | 3.16e-09 | 41 |
future forebrain | 3.16e-09 | 41 |
nervous system | 1.57e-08 | 89 |
central nervous system | 5.64e-08 | 81 |
brain grey matter | 1.15e-07 | 34 |
gray matter | 1.15e-07 | 34 |
brain | 3.72e-07 | 68 |
future brain | 3.72e-07 | 68 |
regional part of telencephalon | 7.80e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
cancer | 6.17e-15 | 235 |
disease of cellular proliferation | 1.38e-14 | 239 |
hematologic cancer | 5.21e-10 | 51 |
immune system cancer | 5.21e-10 | 51 |
carcinoma | 9.91e-09 | 106 |
leukemia | 1.05e-08 | 39 |
cell type cancer | 4.94e-08 | 143 |
organ system cancer | 5.94e-07 | 137 |
myeloid leukemia | 5.94e-07 | 31 |