FFCP PHASE1:Hg19::chr11:75140914..75140942,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:75140914..75140942,- to FFCP PHASE1:Hg19::chr11:75140914..75140942,-: NSchange) |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=283212 | |EntrezGene=283212 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26597 | |HGNC=26597 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=164bp_to_ENST00000460787_5end | |||
|cluster_id=chr11:75140914..75140942,- | |||
|coexpression_cluster_id=C2165 | |||
|description=CAGE_peak_2_at_KLHL35_5end | |||
|id=chr11:75140914..75140942,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002535;2.66e-18;2!CL:0002563;1.55e-09;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002535,2.66e-18,2;CL:0002563,1.55e-09,4 | |||
|ontology_enrichment_development_v019=UBERON:0008425;4.09e-10;1!UBERON:0000358;1.06e-09;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:178;1.06e-09;1!DOID:326;1.06e-09;1!DOID:3978;1.06e-09;1!DOID:3394;1.06e-09;1!DOID:5844;1.06e-09;1!DOID:3369;1.91e-09;1!DOID:4362;7.46e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:178,8.91e-10,1;DOID:326,8.91e-10,1;DOID:3978,8.91e-10,1;DOID:3394,8.91e-10,1;DOID:5844,8.91e-10,1;DOID:3369,1.62e-09,1;DOID:305,2.38e-09,106;DOID:4362,7.46e-08,5;DOID:0050687,1.25e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0001049!9.78e-21!57;UBERON:0005068!9.78e-21!57;UBERON:0006241!9.78e-21!57;UBERON:0007135!9.78e-21!57;UBERON:0002616!3.17e-18!59;UBERON:0002780!2.83e-17!41;UBERON:0001890!2.83e-17!41;UBERON:0006240!2.83e-17!41;UBERON:0003080!1.08e-16!42;UBERON:0000955!2.32e-16!69;UBERON:0006238!2.32e-16!69;UBERON:0001017!2.07e-15!82;UBERON:0005743!3.04e-15!86;UBERON:0002020!4.05e-15!34;UBERON:0003528!4.05e-15!34;UBERON:0001893!5.91e-15!34;UBERON:0001869!8.53e-15!32;UBERON:0003075!2.26e-14!86;UBERON:0007284!2.26e-14!86;UBERON:0002791!5.65e-14!33;UBERON:0002346!2.82e-13!90;UBERON:0002619!4.71e-13!22;UBERON:0001950!6.01e-13!20;UBERON:0000073!8.08e-13!94;UBERON:0001016!8.08e-13!94;UBERON:0000956!1.65e-12!25;UBERON:0000203!1.65e-12!25;UBERON:0007023!1.79e-12!115;UBERON:0003056!2.56e-10!61;UBERON:0000033!1.35e-07!123;UBERON:0000473!1.82e-07!8;UBERON:0000025!4.79e-07!194;UBERON:0003135!7.71e-07!11;UBERON:0000153!7.78e-07!129;UBERON:0007811!7.78e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0006955;2.66e-18;2!UBERON:0004801;2.66e-18;2!UBERON:0001242;1.55e-09;4!UBERON:0001262;1.55e-09;4!UBERON:0004786;1.55e-09;4!UBERON:0004808;1.55e-09;4!UBERON:0001277;1.55e-09;4!UBERON:0004913;1.91e-09;1!UBERON:0003703;1.91e-09;1!UBERON:0001174;1.91e-09;1!UBERON:0004914;1.91e-09;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006955,2.66e-18,2;UBERON:0004801,2.66e-18,2;UBERON:0001242,1.55e-09,4;UBERON:0001262,1.55e-09,4;UBERON:0004786,1.55e-09,4;UBERON:0004808,1.55e-09,4;UBERON:0001277,1.55e-09,4;UBERON:0004913,2.08e-09,1;UBERON:0003703,2.08e-09,1;UBERON:0001174,2.08e-09,1;UBERON:0004914,2.08e-09,1 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0.919421224478927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56738522469114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0.164437904603676,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0.950452044448374,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0.973269740605272,0,0,0,0.130979075497713,0,0,0,0.174129737299267,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0.194874010322397,0.252433774244115,0,0,0.355009592516614,0,0,0,0,0,0,0,0,0,0.252320850875628,0,1.56449532329816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.67356066463832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0.25248486685276,0.063497894292169,0.763976851116555,0,0,0.205654985406647,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0.271265023699736,0,0,0,0,0,2.27407504055985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.92211302998949,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0.501689773854853,0.254876273045038,0,0,0,0,0.256450125116389,0,0,0,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0.165284915360978,0,0.127612712494584,0,0,0,0,0,0,0,0.18532421910392,0.143124886741991,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31535265576129,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0.324621940274555,0,0,0,0,0,0,0,0,0,0,0,0,0.390776190804081,0,0,0,0,0,17.5912107983727,0,0,0,0,0.23874448473769,0,0.614321404198464,0,0.140669416410513,0,0,0,0,0,7.80991518348256,0,0,0,0,0,0,0,0,0,0.969332746095218,0.278304294485554,0,0.260427761085233,15.2180399993381,0,0,3.55955110409873,1.41832609060762,0,0,0,0,0.361789315876224,0,0,0.295547618953547,0.658156191461918,0.10893846351899,0,0,0,0,0,0.108647371922008,1.5950057986596,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,8.48118428603645,0,0,0,0,0,0,0,0.067401132980677,0,0.468528891450678,0,0.19566461893209,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,14.4518282923468,0.34945333648406,0,0.0967563312890851,0.0730893170861856,0,0,0,0,0,0,0.189932387867636,2.34661659281764,0,0.213452994739353,0.39961921916426,1.15272333723285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.39614800598789,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.425246896606173,0,0,0,0,0.179287339332845,0,0,0,0,0,0,0,0,0.082092520749339,0,0.226624183040251,0,0,0.129282956361551,0.52893040697076,0,0,0,0,0,0,0.395223263795889,0,0,0,0,0,0,0,0,0.610131324509816,0.250381861413,0,0.221858103073705,0.372578417648301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521745061811734,0,0,0,0,0,0,0,0,0,0,0,0.385239660814607,0,0,0,0.694567422971502,2.20263034055821,0,0,0.877136198314828,0.176689145945881,0,0,0,0,10.0273785538536,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.385375350578757,0,0.319267718114302,0.205116364240755,0,0.484100767249525,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0.781514011233092,0,0,1.18284868973636,0.270150338473579,0,0.206686796501184,0.253663240775627,1.09394961803644,0,0,0,0,0.535701835878287,0.336283722218824,0,0,0,0,0,0.883606528698812,0.394636641377094,0,0,0,0.471346769748006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935757853848423,0,0,0,0,0.603851374266694,0,0.218559560503957,0,0,0,0,0,0.4226557275834,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0.679914901909147,0.436350690340377,0,0,0,0.432626562123789,0,0,0,0.509944148709909,0.801652215796681,1.10273879441814,3.25919801080088,0.606229585745915,0.267964130156178,0,0.20686599172379,0,0,0,0,0,0,0,0.217716747896961,0,0,0.0717222053926763,0,0,0,0,0,2.34640942403454,0,0,0,0,0 | |phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0.919421224478927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56738522469114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0.164437904603676,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0.950452044448374,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0.973269740605272,0,0,0,0.130979075497713,0,0,0,0.174129737299267,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0.194874010322397,0.252433774244115,0,0,0.355009592516614,0,0,0,0,0,0,0,0,0,0.252320850875628,0,1.56449532329816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.67356066463832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0.25248486685276,0.063497894292169,0.763976851116555,0,0,0.205654985406647,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0.271265023699736,0,0,0,0,0,2.27407504055985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.92211302998949,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0.501689773854853,0.254876273045038,0,0,0,0,0.256450125116389,0,0,0,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0.165284915360978,0,0.127612712494584,0,0,0,0,0,0,0,0.18532421910392,0.143124886741991,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31535265576129,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0.324621940274555,0,0,0,0,0,0,0,0,0,0,0,0,0.390776190804081,0,0,0,0,0,17.5912107983727,0,0,0,0,0.23874448473769,0,0.614321404198464,0,0.140669416410513,0,0,0,0,0,7.80991518348256,0,0,0,0,0,0,0,0,0,0.969332746095218,0.278304294485554,0,0.260427761085233,15.2180399993381,0,0,3.55955110409873,1.41832609060762,0,0,0,0,0.361789315876224,0,0,0.295547618953547,0.658156191461918,0.10893846351899,0,0,0,0,0,0.108647371922008,1.5950057986596,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,8.48118428603645,0,0,0,0,0,0,0,0.067401132980677,0,0.468528891450678,0,0.19566461893209,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,14.4518282923468,0.34945333648406,0,0.0967563312890851,0.0730893170861856,0,0,0,0,0,0,0.189932387867636,2.34661659281764,0,0.213452994739353,0.39961921916426,1.15272333723285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.39614800598789,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.425246896606173,0,0,0,0,0.179287339332845,0,0,0,0,0,0,0,0,0.082092520749339,0,0.226624183040251,0,0,0.129282956361551,0.52893040697076,0,0,0,0,0,0,0.395223263795889,0,0,0,0,0,0,0,0,0.610131324509816,0.250381861413,0,0.221858103073705,0.372578417648301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521745061811734,0,0,0,0,0,0,0,0,0,0,0,0.385239660814607,0,0,0,0.694567422971502,2.20263034055821,0,0,0.877136198314828,0.176689145945881,0,0,0,0,10.0273785538536,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.385375350578757,0,0.319267718114302,0.205116364240755,0,0.484100767249525,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0.781514011233092,0,0,1.18284868973636,0.270150338473579,0,0.206686796501184,0.253663240775627,1.09394961803644,0,0,0,0,0.535701835878287,0.336283722218824,0,0,0,0,0,0.883606528698812,0.394636641377094,0,0,0,0.471346769748006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935757853848423,0,0,0,0,0.603851374266694,0,0.218559560503957,0,0,0,0,0,0.4226557275834,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0.679914901909147,0.436350690340377,0,0,0,0.432626562123789,0,0,0,0.509944148709909,0.801652215796681,1.10273879441814,3.25919801080088,0.606229585745915,0.267964130156178,0,0.20686599172379,0,0,0,0,0,0,0,0.217716747896961,0,0,0.0717222053926763,0,0,0,0,0,2.34640942403454,0,0,0,0,0 | ||
|short_description=p2@KLHL35 | |||
}} | }} |
Latest revision as of 06:09, 20 September 2015
Short description: | p2@KLHL35 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_KLHL35_5end |
Coexpression cluster: | C2165_mesothelioma_adenocarcinoma_epidermoid_breast_colon_argyrophil_Prostate |
Association with transcript: | 164bp_to_ENST00000460787_5end |
EntrezGene: | KLHL35 |
HGNC: | 26597 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 2.66e-18 | 2 |
intestinal epithelial cell | 1.55e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
uterine epithelium | 2.66e-18 | 2 |
cervix epithelium | 2.66e-18 | 2 |
intestinal mucosa | 1.55e-09 | 4 |
wall of intestine | 1.55e-09 | 4 |
gastrointestinal system mucosa | 1.55e-09 | 4 |
gastrointestinal system epithelium | 1.55e-09 | 4 |
intestinal epithelium | 1.55e-09 | 4 |
hepatopancreatic ampulla | 2.08e-09 | 1 |
extrahepatic bile duct | 2.08e-09 | 1 |
common bile duct | 2.08e-09 | 1 |
duodenal papilla | 2.08e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
vascular disease | 8.91e-10 | 1 |
ischemia | 8.91e-10 | 1 |
extrinsic cardiomyopathy | 8.91e-10 | 1 |
myocardial ischemia | 8.91e-10 | 1 |
myocardial infarction | 8.91e-10 | 1 |
peripheral primitive neuroectodermal tumor | 1.62e-09 | 1 |
carcinoma | 2.38e-09 | 106 |
cervical cancer | 7.46e-08 | 5 |
cell type cancer | 1.25e-07 | 143 |