FFCP PHASE1:Hg19::chr11:73703204..73703213,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=11bp_to_ENST00000534962_5end | |||
|cluster_id=chr11:73703204..73703213,- | |||
|coexpression_cluster_id=C49 | |||
|description=CAGE_peak_1_at_ENST00000534962_5end | |||
|id=chr11:73703204..73703213,- | |||
|ontology_enrichment_celltype=CL:0002322!3.76e-32!5;CL:0000540!4.17e-17!6;CL:0000031!4.17e-17!6;CL:0000404!4.17e-17!6;CL:0000039!1.35e-14!7;CL:0000586!1.35e-14!7;CL:0000047!7.23e-13!8;CL:0000784!5.74e-09!3;CL:0002319!1.03e-07!25;CL:0000133!8.08e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0002322;6.73e-67;5!CL:0000039;3.29e-30;7!CL:0000586;3.29e-30;7!CL:0002321;2.04e-22;15!CL:0000540;1.02e-20;6!CL:0000404;1.02e-20;6!CL:0000148;1.15e-12;10!CL:0000147;3.30e-09;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,6.29e-67,5;CL:0000039,3.55e-30,7;CL:0000586,3.55e-30,7;CL:0000540,1.02e-20,6;CL:0000031,1.02e-20,6;CL:0000404,1.02e-20,6;CL:0000047,1.05e-15,8;CL:0000148,1.13e-12,10;CL:0000541,1.13e-12,10;CL:0000147,3.25e-09,14;CL:0000133,1.33e-07,59 | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.83e-21;10!UBERON:0005564;2.83e-21;10!CL:0000031;1.02e-20;6 | |||
|ontology_enrichment_disease=DOID:3095!1.29e-09!22;DOID:2994!1.29e-09!22 | |||
|ontology_enrichment_disease_v019=DOID:3095;7.04e-15;22!DOID:2994;7.04e-15;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,7.25e-15,22;DOID:2994,7.25e-15,22 | |||
|ontology_enrichment_uberon=UBERON:0000473!8.67e-13!8;UBERON:0003135!2.49e-09!11;UBERON:0004177!4.77e-08!7;UBERON:0000991!3.54e-07!21;UBERON:0009196!3.54e-07!21;UBERON:0009117!3.54e-07!21;UBERON:0005564!3.54e-07!21;UBERON:0004176!7.72e-07!22;UBERON:0002370!9.78e-07!4;UBERON:0005058!9.78e-07!4;UBERON:0009113!9.78e-07!4;UBERON:0003295!9.78e-07!4;UBERON:0005562!9.78e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.73e-26;8!UBERON:0003135;2.24e-19;11!UBERON:0000922;3.03e-13;49!UBERON:0000991;2.70e-10;21!UBERON:0003101;7.74e-10;22!UBERON:0000079;7.74e-10;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.84e-26,8;UBERON:0003135,2.35e-19,11;UBERON:0000991,2.77e-10,21;UBERON:0009196,2.77e-10,21;UBERON:0009117,2.77e-10,21;UBERON:0005564,2.77e-10,21;UBERON:0004176,7.92e-10,22;UBERON:0003101,7.92e-10,22;UBERON:0000079,7.92e-10,22 | |||
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|short_description=p1@ENST00000534962 | |||
}} | }} |
Latest revision as of 02:26, 24 July 2015
Short description: | p1@ENST00000534962 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000534962_5end |
Coexpression cluster: | C49_H9_iPS_testicular_HES3GFP_teratocarcinoma_hepatoblastoma_choriocarcinoma |
Association with transcript: | 11bp_to_ENST00000534962_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 6.29e-67 | 5 |
germ line cell | 3.55e-30 | 7 |
germ cell | 3.55e-30 | 7 |
neuron | 1.02e-20 | 6 |
neuroblast | 1.02e-20 | 6 |
electrically signaling cell | 1.02e-20 | 6 |
neuronal stem cell | 1.05e-15 | 8 |
melanocyte | 1.13e-12 | 10 |
melanoblast | 1.13e-12 | 10 |
pigment cell | 3.25e-09 | 14 |
neurectodermal cell | 1.33e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
testis | 1.84e-26 | 8 |
male reproductive organ | 2.35e-19 | 11 |
gonad | 2.77e-10 | 21 |
indifferent external genitalia | 2.77e-10 | 21 |
indifferent gonad | 2.77e-10 | 21 |
gonad primordium | 2.77e-10 | 21 |
external genitalia | 7.92e-10 | 22 |
male organism | 7.92e-10 | 22 |
male reproductive system | 7.92e-10 | 22 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 7.25e-15 | 22 |
germ cell cancer | 7.25e-15 | 22 |