FFCP PHASE1:Hg19::chr11:73020455..73020520,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:73020455..73020520,+ to FFCP PHASE1:Hg19::chr11:73020455..73020520,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9828 | |EntrezGene=9828 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=21726 | |HGNC=21726 | ||
|TSSclassifier=strong | |||
|UniProt=Q96PE2 | |UniProt=Q96PE2 | ||
|association_with_transcript=-367bp_to_AB002335_5end | |||
|cluster_id=chr11:73020455..73020520,+ | |||
|description=CAGE_peak_3_at_ARHGEF17_5end | |||
|id=chr11:73020455..73020520,+ | |||
|ontology_enrichment_celltype=CL:0000055!3.39e-25!180;CL:0000222!8.28e-19!119;CL:0000057!6.96e-15!75;CL:0000183!1.47e-14!59;CL:0000187!1.66e-12!54;CL:0000192!1.83e-12!42;CL:0000514!1.83e-12!42;CL:0000680!7.96e-12!57;CL:0000056!7.96e-12!57;CL:0000355!7.96e-12!57;CL:0000359!1.91e-10!32;CL:0000220!9.46e-10!246;CL:0000393!1.73e-09!60;CL:0000211!1.73e-09!60;CL:0002321!3.05e-09!248 | |||
|ontology_enrichment_celltype_v019=CL:0000359;2.92e-11;32!CL:0000192;5.28e-11;43!CL:0000349;1.58e-08;19!CL:0000187;3.60e-08;55!CL:0000134;1.80e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,7.92e-21,121;CL:0000187,1.83e-14,55;CL:0000192,2.25e-14,43;CL:0000514,2.25e-14,43;CL:0000057,4.92e-14,76;CL:0000680,1.69e-13,58;CL:0000056,1.69e-13,58;CL:0000355,1.69e-13,58;CL:0000359,1.35e-11,32;CL:0000393,2.92e-11,61;CL:0000211,2.92e-11,61;CL:0000349,2.40e-08,19;CL:0002321,2.85e-07,250;CL:0002078,3.25e-07,45;CL:0000213,7.12e-07,58;CL:0000215,7.12e-07,58 | |||
|ontology_enrichment_development_v019=CL:0000514;5.28e-11;43!CL:0000355;3.69e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!6.46e-21!118;UBERON:0002049!1.14e-20!79;UBERON:0007798!1.14e-20!79;UBERON:0004872!2.68e-18!84;UBERON:0005256!5.66e-18!143;UBERON:0000055!3.00e-17!69;UBERON:0002100!4.24e-16!216;UBERON:0001009!1.08e-15!113;UBERON:0001981!2.16e-15!60;UBERON:0007500!2.16e-15!60;UBERON:0004537!2.16e-15!60;UBERON:0006965!2.16e-15!60;UBERON:0000119!2.72e-15!312;UBERON:0000475!3.48e-15!365;UBERON:0000483!1.20e-14!309;UBERON:0000477!1.75e-14!286;UBERON:0004535!2.41e-14!110;UBERON:0004111!3.10e-14!241;UBERON:0000914!2.81e-12!83;UBERON:0002329!2.81e-12!83;UBERON:0003077!2.81e-12!83;UBERON:0003059!2.81e-12!83;UBERON:0007282!2.81e-12!83;UBERON:0009618!2.81e-12!83;UBERON:0007285!2.81e-12!83;UBERON:0000490!4.26e-12!138;UBERON:0004290!8.13e-12!70;UBERON:0000468!8.66e-12!659;UBERON:0000025!2.13e-11!194;UBERON:0002385!3.65e-11!63;UBERON:0001015!3.65e-11!63;UBERON:0000383!3.65e-11!63;UBERON:0000486!3.77e-11!82;UBERON:0001637!6.09e-11!42;UBERON:0003509!6.09e-11!42;UBERON:0004572!6.09e-11!42;UBERON:0000481!6.29e-11!347;UBERON:0001134!7.88e-11!61;UBERON:0002036!7.88e-11!61;UBERON:0003082!7.88e-11!61;UBERON:0000467!4.25e-10!625;UBERON:0000480!7.05e-10!626;UBERON:0003104!1.16e-09!238;UBERON:0009142!1.16e-09!238;UBERON:0004573!6.37e-09!33;UBERON:0004571!6.37e-09!33;UBERON:0004923!3.95e-08!57;UBERON:0000353!4.94e-07!17;UBERON:0000478!9.79e-07!24 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;6.02e-09;33!UBERON:0004571;6.02e-09;33!UBERON:0002049;9.63e-09;75!UBERON:0007798;9.63e-09;75!UBERON:0001637;1.75e-08;42!UBERON:0003509;1.75e-08;42!UBERON:0004572;1.75e-08;42!UBERON:0003914;2.72e-08;74!UBERON:0007500;3.62e-08;56!UBERON:0001981;3.62e-08;56!UBERON:0004537;3.62e-08;56!UBERON:0000055;4.06e-08;65!UBERON:0000478;2.50e-07;24!UBERON:0000353;4.06e-07;15 | |||
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| ||
|short_description=p3@ARHGEF17 | |||
}} | }} |
Latest revision as of 02:53, 20 September 2015
Short description: | p3@ARHGEF17 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ARHGEF17_5end |
Coexpression cluster: | NA |
Association with transcript: | -367bp_to_AB002335_5end |
EntrezGene: | ARHGEF17 |
HGNC: | 21726 |
UniProt: | Q96PE2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 7.92e-21 | 121 |
muscle cell | 1.83e-14 | 55 |
smooth muscle cell | 2.25e-14 | 43 |
smooth muscle myoblast | 2.25e-14 | 43 |
fibroblast | 4.92e-14 | 76 |
muscle precursor cell | 1.69e-13 | 58 |
myoblast | 1.69e-13 | 58 |
multi-potent skeletal muscle stem cell | 1.69e-13 | 58 |
vascular associated smooth muscle cell | 1.35e-11 | 32 |
electrically responsive cell | 2.92e-11 | 61 |
electrically active cell | 2.92e-11 | 61 |
extraembryonic cell | 2.40e-08 | 19 |
embryonic cell | 2.85e-07 | 250 |
meso-epithelial cell | 3.25e-07 | 45 |
lining cell | 7.12e-07 | 58 |
barrier cell | 7.12e-07 | 58 |