FFCP PHASE1:Hg19::chr11:66084059..66084071,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:66084059..66084071,- to FFCP PHASE1:Hg19::chr11:66084059..66084071,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=57124 | |EntrezGene=57124 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18219 | |HGNC=18219 | ||
|TSSclassifier=strong | |||
|UniProt=Q9HCU0 | |UniProt=Q9HCU0 | ||
|association_with_transcript=-422bp_to_AK027290_5end | |||
|cluster_id=chr11:66084059..66084071,- | |||
|coexpression_cluster_id=C563 | |||
|description=CAGE_peak_12_at_CD248_5end | |||
|id=chr11:66084059..66084071,- | |||
|ontology_enrichment_celltype=CL:0000057!7.66e-38!75;CL:0000055!1.30e-31!180;CL:0000048!9.45e-21!430;CL:0000723!2.42e-20!436;CL:0000034!3.69e-19!444;CL:0002320!2.48e-15!365;CL:0002620!4.00e-15!23;CL:0002371!1.91e-14!591;CL:0000134!5.15e-13!358;CL:0000144!2.97e-12!625;CL:0002334!4.83e-12!12;CL:0000219!1.78e-10!390;CL:0000183!7.05e-09!59;CL:0000187!1.32e-08!54;CL:0000680!1.70e-08!57;CL:0000056!1.70e-08!57;CL:0000355!1.70e-08!57;CL:0000548!8.34e-08!679;CL:0000004!8.34e-08!679;CL:0000255!8.34e-08!679;CL:0000012!1.47e-07!682;CL:0000393!1.69e-07!60;CL:0000211!1.69e-07!60;CL:0000499!5.52e-07!27 | |||
|ontology_enrichment_celltype_v019=CL:0002620;2.15e-18;23!CL:0002334;7.50e-13;12!CL:0002570;1.46e-11;8!CL:0000134;3.02e-10;55!CL:0000048;1.67e-09;58!CL:0000135;1.76e-09;3!CL:0000388;1.76e-09;3!CL:0002320;3.96e-09;188!CL:0002559;4.77e-09;5!CL:0000346;6.91e-09;3!CL:1000428;6.91e-09;3!CL:0000723;1.78e-08;61!CL:0000057;6.40e-08;73!CL:0000034;2.63e-07;69!CL:0000197;5.57e-07;6!CL:0000098;5.57e-07;6!CL:0002167;5.57e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,8.24e-26,76;CL:0002620,8.42e-18,23;CL:0002320,5.35e-15,361;CL:0000134,3.30e-13,354;CL:0002334,1.54e-12,12;CL:0000048,2.97e-12,427;CL:0000723,7.29e-12,433;CL:0002570,8.14e-12,8;CL:0000034,2.32e-11,441;CL:0000219,9.19e-11,386;CL:0000135,1.76e-09,3;CL:0000388,1.76e-09,3;CL:0002559,3.83e-09,5;CL:0000346,4.68e-09,3;CL:1000428,4.68e-09,3;CL:0000136,9.61e-08,15;CL:0000197,4.81e-07,6;CL:0000098,4.81e-07,6;CL:0002167,4.81e-07,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;1.16e-08;5!DOID:450;1.16e-08;5!DOID:66;1.16e-08;5!DOID:423;1.16e-08;5!DOID:0080000;1.16e-08;5!DOID:11722;1.16e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,1.48e-08,5;DOID:450,1.48e-08,5;DOID:66,1.48e-08,5;DOID:423,1.48e-08,5;DOID:0080000,1.48e-08,5;DOID:11722,1.48e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0002199!7.70e-16!45;UBERON:0002416!7.70e-16!45;UBERON:0002384!5.00e-15!375;UBERON:0000914!2.45e-14!83;UBERON:0002329!2.45e-14!83;UBERON:0003077!2.45e-14!83;UBERON:0003059!2.45e-14!83;UBERON:0007282!2.45e-14!83;UBERON:0009618!2.45e-14!83;UBERON:0007285!2.45e-14!83;UBERON:0002097!2.98e-13!40;UBERON:0003102!1.35e-12!95;UBERON:0004290!4.25e-11!70;UBERON:0000486!4.39e-10!82;UBERON:0004923!5.59e-09!57;UBERON:0005256!9.16e-08!143;UBERON:0001013!9.50e-08!14;UBERON:0002385!1.51e-07!63;UBERON:0001015!1.51e-07!63;UBERON:0000383!1.51e-07!63;UBERON:0001134!2.16e-07!61;UBERON:0002036!2.16e-07!61;UBERON:0003082!2.16e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0001013;4.01e-17;14!UBERON:0002097;1.36e-12;41!UBERON:0002199;1.88e-12;46!UBERON:0002416;1.88e-12;46!UBERON:0003102;1.67e-10;50!UBERON:0007846;1.76e-09;3!UBERON:0000043;1.76e-09;3!UBERON:0007845;1.76e-09;3!UBERON:0002073;4.77e-09;5!UBERON:0000412;6.91e-09;3!UBERON:0001992;6.91e-09;3!UBERON:0002384;1.96e-08;198!UBERON:0002072;2.78e-08;5!UBERON:0004457;9.53e-07;9!UBERON:0000042;9.53e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002199,1.11e-20,46;UBERON:0002416,1.11e-20,46;UBERON:0001013,1.93e-17,14;UBERON:0002097,2.05e-15,41;UBERON:0002384,5.14e-15,371;UBERON:0003102,2.86e-10,99;UBERON:0007846,1.76e-09,3;UBERON:0000043,1.76e-09,3;UBERON:0007845,1.76e-09,3;UBERON:0002073,3.83e-09,5;UBERON:0005086,3.83e-09,5;UBERON:0000412,4.68e-09,3;UBERON:0001992,4.68e-09,3;UBERON:0002072,3.76e-08,5 | |||
|phase1_expression=0.908391896352783,4.49611100171065,1.83240725324762,0,0,1.74467704820074,0,1.26343974685366,2.61185628199839,0,0,0.873765488520689,0.527533956456907,0.37129905888014,0.662794751455832,0,0,0,0,0.123121058076788,0.204000691244253,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,1.34140171940727,0.255725123687061,0,0.50133791063589,0,0,0.486634870302636,0,0.443458794925128,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98183171017191,0.379891534993739,0.662045904066094,4.01571269048339,0.709336764396714,1.68203280042692,0,0.24666754841716,0.311211035399766,0.134710672069688,0.326923806226917,1.51357427644931,0,0.468642863667593,0.936480230490962,0,0.747243402759005,0.23486899728753,0.161872944368132,0.421352420106746,0.408308342509787,0.982674538494144,1.75653827998801,0,0.989067717114227,0.910161361938026,0.718618141816238,0.336672227908132,0.500474079487857,0.277064115484183,1.31693286264251,1.22595118319608,0.300476117813194,0,2.69084453533293,0.85422955527427,1.05965950579781,3.00091096084402,1.44273540933814,1.28820270022815,1.48893485065272,1.0126579934476,1.07180705677318,1.00973509697646,1.10459878370759,1.13152239773168,4.61512470271599,2.11579406278045,1.52604533079439,0,0,0,0,0,0,0,0,0,1.56449532329816,5.78916844373597,2.76269842704961,0.464367928031979,2.16563844500876,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,4.41026134156626,0,0,0,0,0,0.514703430895577,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0.43596006883328,0.22001485746285,0.129271715757778,7.15312891703765,0,1.06375246633948,1.04007436911366,1.02882949704857,0,0.799266537048298,0.57191197463259,4.34097284313154,2.46972101034231,0,0.355391948742546,0,0,0,0.099972991182057,0,0,0,0,0,0,0.723906533337896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36807447515742,2.50085260529839,0,1.24782516918484,3.56857977594324,1.89242898040722,1.28855556491985,0.300946099727719,2.27407504055985,0,0.664225598535437,0.921845842708516,1.12948698808508,1.76221041716467,1.37257369524342,0,0,0,0,1.66435439510497,0.604780586659361,2.48107807818777,0.306923946576125,3.92924132206303,2.17836553734692,0.511707249066704,1.12597744800525,4.45254199334973,1.07946785661859,1.42049380250502,0.574890092096664,1.03850885836724,0.929683027679674,0,0,0,0.459257792658427,0.364182336013434,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.48335359146061,0.924291702687866,0.767518373630648,0,0.751941714077915,1.59518363305651,0.767039646744908,0.356128142586949,0,0,0,0,0,2.20368642781448,0.6970372701606,0,0,0,0,0,0,0.316379424718726,0.190630193923825,1.27948895655667,0,0.636406495851874,0,0.179872457583315,1.64722217841633,0.706874414074119,0,0,0,0,0.243713489631284,0,0.682499557039929,0.424216295861138,0,0.551365343546124,0,0.438450885253763,0.578775534266688,1.31178950409327,0.202910376962704,0.6196469961995,0.563391205064483,0.143411352204052,0.196498082026242,0,0.354761064070598,1.89996871767898,1.97576935775941,0.379473173765715,2.44954304171488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0.307160702099232,0,0,0,0,0,0.19924798825107,0,0,0,0,0.933118762985422,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0.638002319463839,0.274792780205587,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0.360299883542404,0,0,0,0.0674035438541849,0,0,0,0,0,0.137539436597234,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0.864221491201268,0.653174720218818,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144921028610825,1.34329322598187,1.8697064787778,4.99325275352352,0.568209015825267,1.76097531226803,3.55924488638614,0.228840068396924,2.11723293268535,1.08806040407946,0.295710299979268,0.159296767163702,0,0.310525913752519,2.07353103920428,0.53168342911599,1.5652351854352,0.150257608997218,0.380805212168795,0.406870733204662,0.727394636810238,0.107410557042488,0,0.796191777397232,0,1.37358282073117,2.69399591012735,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637724760305049,0.371807292777007,0,0,0,0,2.1160556621441,1.8374728641192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.971421986118279,0,0,0,0,0,0,0,0,0,0.490296643507811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315543124386369,0,0,0,4.46394021800102,3.69740502905135,3.46101249699031,0,0,0,0,0,0,0,0,0,0,0,0.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| ||
|short_description=p12@CD248 | |||
}} | }} |
Latest revision as of 14:03, 19 September 2015
Short description: | p12@CD248 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_CD248_5end |
Coexpression cluster: | C563_Mesenchymal_Fibroblast_Adipocyte_tenocyte_Placental_Hair_Synoviocyte |
Association with transcript: | -422bp_to_AK027290_5end |
EntrezGene: | CD248 |
HGNC: | 18219 |
UniProt: | Q9HCU0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 8.24e-26 | 76 |
skin fibroblast | 8.42e-18 | 23 |
connective tissue cell | 5.35e-15 | 361 |
mesenchymal cell | 3.30e-13 | 354 |
preadipocyte | 1.54e-12 | 12 |
multi fate stem cell | 2.97e-12 | 427 |
somatic stem cell | 7.29e-12 | 433 |
mesenchymal stem cell of adipose | 8.14e-12 | 8 |
stem cell | 2.32e-11 | 441 |
motile cell | 9.19e-11 | 386 |
fibrocyte | 1.76e-09 | 3 |
tendon cell | 1.76e-09 | 3 |
hair follicle cell | 3.83e-09 | 5 |
hair follicle dermal papilla cell | 4.68e-09 | 3 |
stem cell of epidermis | 4.68e-09 | 3 |
fat cell | 9.61e-08 | 15 |
receptor cell | 4.81e-07 | 6 |
sensory epithelial cell | 4.81e-07 | 6 |
olfactory epithelial cell | 4.81e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
integument | 1.11e-20 | 46 |
integumental system | 1.11e-20 | 46 |
adipose tissue | 1.93e-17 | 14 |
skin of body | 2.05e-15 | 41 |
connective tissue | 5.14e-15 | 371 |
surface structure | 2.86e-10 | 99 |
dense regular connective tissue | 1.76e-09 | 3 |
tendon | 1.76e-09 | 3 |
regular connective tissue | 1.76e-09 | 3 |
hair follicle | 3.83e-09 | 5 |
hair follicle placode | 3.83e-09 | 5 |
dermal papilla | 4.68e-09 | 3 |
papillary layer of dermis | 4.68e-09 | 3 |
hypodermis | 3.76e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 1.48e-08 | 5 |
myotonic disease | 1.48e-08 | 5 |
muscle tissue disease | 1.48e-08 | 5 |
myopathy | 1.48e-08 | 5 |
muscular disease | 1.48e-08 | 5 |
myotonic dystrophy | 1.48e-08 | 5 |