FFCP PHASE1:Hg19::chr11:65405556..65405623,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:65405556..65405623,+ to FFCP PHASE1:Hg19::chr11:65405556..65405623,+: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6494 | |EntrezGene=6494 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10885 | |HGNC=10885 | ||
|TSSclassifier=strong | |||
|UniProt=E9PIB3,Q96FS4 | |UniProt=E9PIB3,Q96FS4 | ||
|association_with_transcript=0bp_to_ENST00000526137,ENST00000533361,ENST00000534313,NM_006747,uc001ofb.2_5end | |||
|cluster_id=chr11:65405556..65405623,+ | |||
|coexpression_cluster_id=C57 | |||
|description=CAGE_peak_1_at_SIPA1_5end | |||
|id=chr11:65405556..65405623,+ | |||
|ontology_enrichment_celltype=CL:0000988!4.06e-34!182;CL:0000037!1.09e-33!172;CL:0000566!1.09e-33!172;CL:0002032!3.38e-32!165;CL:0000837!3.38e-32!165;CL:0000738!4.38e-29!140;CL:0002087!3.89e-27!119;CL:0002031!7.87e-25!124;CL:0000763!3.98e-16!112;CL:0000049!3.98e-16!112;CL:0000542!5.60e-16!53;CL:0000051!5.60e-16!53;CL:0000838!5.86e-16!52;CL:0000766!3.18e-14!76;CL:0000115!3.86e-14!35;CL:0000839!5.65e-11!70;CL:0002078!6.08e-11!44;CL:0002320!1.36e-10!365;CL:0000048!1.51e-10!430;CL:0000791!1.55e-10!18;CL:0000789!1.55e-10!18;CL:0002420!1.55e-10!18;CL:0002419!1.55e-10!18;CL:0000790!1.55e-10!18;CL:0002194!2.25e-10!63;CL:0000576!2.25e-10!63;CL:0000040!2.25e-10!63;CL:0000559!2.25e-10!63;CL:0000557!5.07e-10!71;CL:0000134!1.46e-09!358;CL:0002009!2.23e-09!65;CL:0002139!2.54e-09!24;CL:0000723!3.35e-09!436;CL:0000034!6.09e-09!444;CL:0000084!3.96e-08!25;CL:0000827!3.96e-08!25;CL:0000625!9.20e-08!11;CL:0000071!1.07e-07!18;CL:0002546!1.07e-07!18;CL:0002057!1.24e-07!42;CL:0000219!1.44e-07!390;CL:0000945!1.86e-07!24;CL:0000826!1.86e-07!24;CL:0000236!5.16e-07!14;CL:0000860!5.48e-07!45 | |||
|ontology_enrichment_celltype_v019=CL:0000115;1.29e-12;36!CL:0000791;1.51e-10;18!CL:0000789;1.51e-10;18!CL:0002419;1.51e-10;18!CL:0000542;1.29e-09;53!CL:0002139;2.42e-09;24!CL:0000084;2.61e-08;25!CL:0002087;6.58e-08;104!CL:0000625;8.99e-08;11!CL:0002078;9.55e-08;45!CL:0000071;9.85e-08;18!CL:0000945;1.80e-07;24!CL:0000738;9.31e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.18e-34,168;CL:0000988,1.61e-34,177;CL:0002032,3.64e-33,161;CL:0000837,3.64e-33,161;CL:0000738,3.98e-30,136;CL:0002087,2.78e-28,115;CL:0002031,7.51e-26,120;CL:0000763,6.76e-17,108;CL:0000049,6.76e-17,108;CL:0000542,5.60e-16,53;CL:0000051,5.60e-16,53;CL:0000838,5.86e-16,52;CL:0000766,3.35e-15,72;CL:0000115,1.23e-14,36;CL:0000839,8.37e-12,66;CL:0002078,2.15e-11,45;CL:0002194,3.07e-11,59;CL:0000576,3.07e-11,59;CL:0000040,3.07e-11,59;CL:0000559,3.07e-11,59;CL:0000557,8.96e-11,67;CL:0000791,1.55e-10,18;CL:0000789,1.55e-10,18;CL:0002420,1.55e-10,18;CL:0002419,1.55e-10,18;CL:0000790,1.55e-10,18;CL:0002320,1.68e-10,361;CL:0000048,1.96e-10,427;CL:0002009,3.83e-10,61;CL:0000473,1.17e-09,48;CL:0000234,1.17e-09,48;CL:0000134,1.79e-09,354;CL:0002139,2.53e-09,24;CL:0000723,4.22e-09,433;CL:0000034,7.67e-09,441;CL:0000084,3.96e-08,25;CL:0000827,3.96e-08,25;CL:0000625,9.20e-08,11;CL:0000071,1.07e-07,18;CL:0002546,1.07e-07,18;CL:0000860,1.24e-07,42;CL:0002057,1.24e-07,42;CL:0000219,1.79e-07,386;CL:0000945,1.86e-07,24;CL:0000826,1.86e-07,24;CL:0000236,5.16e-07,14 | |||
|ontology_enrichment_development_v019=CL:0000790;1.51e-10;18!CL:0000051;1.29e-09;53!CL:0002546;9.85e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!4.30e-19!112;UBERON:0003081!6.28e-18!216;UBERON:0002390!4.96e-16!102;UBERON:0003061!4.96e-16!102;UBERON:0001009!1.03e-12!113;UBERON:0004535!1.50e-12!110;UBERON:0002384!9.68e-11!375;UBERON:0002405!2.95e-10!115;UBERON:0002049!2.65e-09!79;UBERON:0007798!2.65e-09!79;UBERON:0002371!3.72e-09!80;UBERON:0001986!1.07e-07!18;UBERON:0004638!1.07e-07!18;UBERON:0004852!1.07e-07!18;UBERON:0000055!1.15e-07!69;UBERON:0000178!1.66e-07!15;UBERON:0000179!1.66e-07!15;UBERON:0000463!1.66e-07!15;UBERON:0001474!4.04e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;9.85e-08;18!UBERON:0001986;9.85e-08;18!UBERON:0004852;9.85e-08;18!UBERON:0000178;1.66e-07;15!UBERON:0000179;1.66e-07;15!UBERON:0000463;1.66e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,5.51e-20,108;UBERON:0003081,4.49e-18,203;UBERON:0002390,7.28e-17,98;UBERON:0003061,7.28e-17,98;UBERON:0002405,2.26e-14,93;UBERON:0001009,8.01e-13,112;UBERON:0004535,1.16e-12,109;UBERON:0002384,1.21e-10,371;UBERON:0002371,8.87e-10,76;UBERON:0002049,2.04e-09,78;UBERON:0007798,2.04e-09,78;UBERON:0000926,8.53e-08,315;UBERON:0004120,8.53e-08,315;UBERON:0006603,8.53e-08,315;UBERON:0000055,9.02e-08,68;UBERON:0004638,1.07e-07,18;UBERON:0001986,1.07e-07,18;UBERON:0004852,1.07e-07,18;UBERON:0001474,1.39e-07,82;UBERON:0000178,1.66e-07,15;UBERON:0000179,1.66e-07,15;UBERON:0000463,1.66e-07,15;UBERON:0004765,6.89e-07,90 | |||
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| ||
|short_description=p1@SIPA1 | |||
}} | }} |
Latest revision as of 10:25, 19 September 2015
Short description: | p1@SIPA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SIPA1_5end |
Coexpression cluster: | C57_Neutrophils_Eosinophils_Whole_CD4_CD8_CD19_Natural |
Association with transcript: | 0bp_to_ENST00000526137, ENST00000533361, ENST00000534313, NM_006747, uc001ofb.2_5end |
EntrezGene: | SIPA1 |
HGNC: | 10885 |
UniProt: | E9PIB3Q96FS4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 5.51e-20 | 108 |
lateral plate mesoderm | 4.49e-18 | 203 |
hematopoietic system | 7.28e-17 | 98 |
blood island | 7.28e-17 | 98 |
immune system | 2.26e-14 | 93 |
circulatory system | 8.01e-13 | 112 |
cardiovascular system | 1.16e-12 | 109 |
connective tissue | 1.21e-10 | 371 |
bone marrow | 8.87e-10 | 76 |
vasculature | 2.04e-09 | 78 |
vascular system | 2.04e-09 | 78 |
mesoderm | 8.53e-08 | 315 |
mesoderm-derived structure | 8.53e-08 | 315 |
presumptive mesoderm | 8.53e-08 | 315 |
vessel | 9.02e-08 | 68 |
blood vessel endothelium | 1.07e-07 | 18 |
endothelium | 1.07e-07 | 18 |
cardiovascular system endothelium | 1.07e-07 | 18 |
bone element | 1.39e-07 | 82 |
blood | 1.66e-07 | 15 |
haemolymphatic fluid | 1.66e-07 | 15 |
organism substance | 1.66e-07 | 15 |
skeletal element | 6.89e-07 | 90 |