FFCP PHASE1:Hg19::chr11:62446515..62446522,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:62446515..62446522,- to FFCP PHASE1:Hg19::chr11:62446515..62446522,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=51035 | |EntrezGene=51035 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18402 | |HGNC=18402 | ||
|TSSclassifier=strong | |||
|UniProt=Q04323 | |UniProt=Q04323 | ||
|association_with_transcript=4bp_to_ENST00000294119,NM_015853,uc001nuj.2,uc001nul.1,uc001num.1,uc010rme.1,uc010rmf.1_5end | |||
|cluster_id=chr11:62446515..62446522,- | |||
|description=CAGE_peak_2_at_UBXN1_5end | |||
|id=chr11:62446515..62446522,- | |||
|ontology_enrichment_celltype=CL:0000012!5.75e-19!682;CL:0000548!5.77e-19!679;CL:0000004!5.77e-19!679;CL:0000255!5.77e-19!679;CL:0002321!2.12e-17!248;CL:0000066!2.91e-17!254;CL:0000220!4.29e-17!246;CL:0000003!5.51e-13!722;CL:0000144!7.84e-13!625;CL:0002371!1.75e-10!591;CL:0000063!9.14e-10!578;CL:0002139!2.65e-09!24;CL:0000115!3.38e-09!35;CL:0000071!3.94e-08!18;CL:0002546!3.94e-08!18;CL:0000213!1.08e-07!57;CL:0000215!1.08e-07!57;CL:0000222!9.31e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0002139;2.85e-09;24!CL:0000860;2.89e-08;33!CL:0002057;2.89e-08;33!CL:0000115;3.88e-08;36!CL:0000071;4.33e-08;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,7.09e-18,250;CL:0000066,4.30e-17,253;CL:0000115,1.96e-09,36;CL:0002139,2.61e-09,24;CL:0000071,3.89e-08,18;CL:0002546,3.89e-08,18;CL:0000213,6.51e-08,58;CL:0000215,6.51e-08,58;CL:0000222,4.21e-07,121;CL:0002078,6.99e-07,45;CL:0000076,9.26e-07,63 | |||
|ontology_enrichment_development_v019=CL:0002546;4.33e-08;18 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!3.94e-08!18;UBERON:0004638!3.94e-08!18;UBERON:0004852!3.94e-08!18 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;4.33e-08;18!UBERON:0001986;4.33e-08;18!UBERON:0004852;4.33e-08;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,3.89e-08,18;UBERON:0001986,3.89e-08,18;UBERON:0004852,3.89e-08,18;UBERON:0002049,4.43e-07,78;UBERON:0007798,4.43e-07,78;UBERON:0000055,5.93e-07,68 | |||
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| ||
|short_description=p2@UBXN1 | |||
}} | }} |
Latest revision as of 20:40, 18 September 2015
Short description: | p2@UBXN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_UBXN1_5end |
Coexpression cluster: | NA |
Association with transcript: | 4bp_to_ENST00000294119, NM_015853, uc001nuj.2, uc001nul.1, uc001num.1, uc010rme.1, uc010rmf.1_5end |
EntrezGene: | UBXN1 |
HGNC: | 18402 |
UniProt: | Q04323 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 7.09e-18 | 250 |
epithelial cell | 4.30e-17 | 253 |
endothelial cell | 1.96e-09 | 36 |
endothelial cell of vascular tree | 2.61e-09 | 24 |
blood vessel endothelial cell | 3.89e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.89e-08 | 18 |
lining cell | 6.51e-08 | 58 |
barrier cell | 6.51e-08 | 58 |
mesodermal cell | 4.21e-07 | 121 |
meso-epithelial cell | 6.99e-07 | 45 |
squamous epithelial cell | 9.26e-07 | 63 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 3.89e-08 | 18 |
endothelium | 3.89e-08 | 18 |
cardiovascular system endothelium | 3.89e-08 | 18 |
vasculature | 4.43e-07 | 78 |
vascular system | 4.43e-07 | 78 |
vessel | 5.93e-07 | 68 |