FFCP PHASE1:Hg19::chr11:62368696..62368759,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:62368696..62368759,- to FFCP PHASE1:Hg19::chr11:62368696..62368759,-: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9219 | |EntrezGene=9219 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7411 | |HGNC=7411 | ||
|TSSclassifier=strong | |||
|UniProt=Q68DB1 | |UniProt=Q68DB1 | ||
|association_with_transcript=0bp_to_ENST00000527204,uc010rlx.1_5end | |||
|cluster_id=chr11:62368696..62368759,- | |||
|description=CAGE_peak_4_at_MTA2_5end | |||
|id=chr11:62368696..62368759,- | |||
|ontology_enrichment_celltype=CL:0002371!7.50e-26!591;CL:0000144!3.33e-23!625;CL:0000222!7.48e-19!119;CL:0000003!9.84e-18!722;CL:0000048!6.64e-17!430;CL:0000723!1.55e-16!436;CL:0000548!1.23e-15!679;CL:0000004!1.23e-15!679;CL:0000255!1.23e-15!679;CL:0000012!7.01e-15!682;CL:0000034!2.99e-14!444;CL:0000213!5.77e-14!57;CL:0000215!5.77e-14!57;CL:0002139!6.17e-14!24;CL:0000115!4.43e-13!35;CL:0000071!9.43e-12!18;CL:0002546!9.43e-12!18;CL:0002320!1.05e-10!365;CL:0002078!1.32e-10!44;CL:0000134!2.71e-10!358;CL:0000055!2.12e-09!180;CL:0000063!5.21e-09!578;CL:0000057!1.56e-08!75;CL:0000359!2.50e-08!32;CL:0000192!4.65e-08!42;CL:0000514!4.65e-08!42;CL:0000076!7.16e-08!62;CL:0000183!2.22e-07!59;CL:1000413!2.92e-07!9;CL:0000187!3.08e-07!54;CL:0000219!3.14e-07!390;CL:0000680!4.16e-07!57;CL:0000056!4.16e-07!57;CL:0000355!4.16e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0002139;1.09e-13;24!CL:0000071;1.03e-11;18!CL:0000115;3.62e-11;36!CL:0000213;2.48e-08;58!CL:0000215;2.48e-08;58!CL:0000359;4.33e-08;32!CL:0002078;7.59e-08;45!CL:1000413;2.53e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,3.13e-19,121;CL:0000048,1.02e-16,427;CL:0000723,2.39e-16,433;CL:0000213,1.84e-14,58;CL:0000215,1.84e-14,58;CL:0000034,4.86e-14,441;CL:0002139,6.13e-14,24;CL:0000115,1.30e-13,36;CL:0000071,9.38e-12,18;CL:0002546,9.38e-12,18;CL:0002078,4.65e-11,45;CL:0002320,1.54e-10,361;CL:0000134,3.94e-10,354;CL:0000057,2.32e-08,76;CL:0000359,2.49e-08,32;CL:0000192,5.69e-08,43;CL:0000514,5.69e-08,43;CL:0000076,7.77e-08,63;CL:1000413,2.91e-07,9;CL:0000187,3.46e-07,55;CL:0000680,4.61e-07,58;CL:0000056,4.61e-07,58;CL:0000355,4.61e-07,58;CL:0000219,4.64e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002546;1.03e-11;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004535!1.78e-21!110;UBERON:0001009!3.88e-20!113;UBERON:0000055!1.34e-19!69;UBERON:0002049!8.34e-19!79;UBERON:0007798!8.34e-19!79;UBERON:0004872!8.38e-18!84;UBERON:0001981!3.87e-16!60;UBERON:0007500!3.87e-16!60;UBERON:0004537!3.87e-16!60;UBERON:0006965!3.87e-16!60;UBERON:0001637!5.52e-15!42;UBERON:0003509!5.52e-15!42;UBERON:0004572!5.52e-15!42;UBERON:0003081!2.19e-13!216;UBERON:0001986!9.43e-12!18;UBERON:0004638!9.43e-12!18;UBERON:0004852!9.43e-12!18;UBERON:0004573!7.98e-11!33;UBERON:0004571!7.98e-11!33;UBERON:0002384!3.45e-10!375;UBERON:0000487!2.55e-09!22;UBERON:0003914!3.41e-09!118;UBERON:0006914!1.21e-08!25;UBERON:0003915!2.92e-07!9;UBERON:0004700!2.92e-07!9;UBERON:0001917!2.92e-07!9;UBERON:0000914!7.94e-07!83;UBERON:0002329!7.94e-07!83;UBERON:0003077!7.94e-07!83;UBERON:0003059!7.94e-07!83;UBERON:0007282!7.94e-07!83;UBERON:0009618!7.94e-07!83;UBERON:0007285!7.94e-07!83 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.03e-11;18!UBERON:0001986;1.03e-11;18!UBERON:0004852;1.03e-11;18!UBERON:0000055;1.67e-11;65!UBERON:0001637;3.64e-11;42!UBERON:0003509;3.64e-11;42!UBERON:0004572;3.64e-11;42!UBERON:0007500;1.56e-10;56!UBERON:0001981;1.56e-10;56!UBERON:0004537;1.56e-10;56!UBERON:0004573;3.99e-10;33!UBERON:0004571;3.99e-10;33!UBERON:0000487;2.83e-09;22!UBERON:0002049;3.51e-09;75!UBERON:0007798;3.51e-09;75!UBERON:0006914;1.37e-08;25!UBERON:0003915;2.53e-07;9!UBERON:0004700;2.53e-07;9!UBERON:0001917;2.53e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004535,9.21e-22,109;UBERON:0001009,2.11e-20,112;UBERON:0000055,5.42e-20,68;UBERON:0002049,3.82e-19,78;UBERON:0007798,3.82e-19,78;UBERON:0004872,4.13e-18,83;UBERON:0007500,1.64e-16,59;UBERON:0001981,1.64e-16,59;UBERON:0004537,1.64e-16,59;UBERON:0006965,1.64e-16,59;UBERON:0003081,3.64e-15,203;UBERON:0001637,5.48e-15,42;UBERON:0003509,5.48e-15,42;UBERON:0004572,5.48e-15,42;UBERON:0000926,1.00e-12,315;UBERON:0004120,1.00e-12,315;UBERON:0006603,1.00e-12,315;UBERON:0004638,9.38e-12,18;UBERON:0001986,9.38e-12,18;UBERON:0004852,9.38e-12,18;UBERON:0004573,7.94e-11,33;UBERON:0004571,7.94e-11,33;UBERON:0002384,5.06e-10,371;UBERON:0000487,2.54e-09,22;UBERON:0003914,3.35e-09,117;UBERON:0006914,1.21e-08,25;UBERON:0007503,1.15e-07,78;UBERON:0003915,2.91e-07,9;UBERON:0004700,2.91e-07,9;UBERON:0001917,2.91e-07,9;UBERON:0000490,3.52e-07,148 | |||
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| ||
|short_description=p4@MTA2 | |||
}} | }} |
Latest revision as of 19:59, 18 September 2015
Short description: | p4@MTA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_MTA2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000527204, uc010rlx.1_5end |
EntrezGene: | MTA2 |
HGNC: | 7411 |
UniProt: | Q68DB1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 3.13e-19 | 121 |
multi fate stem cell | 1.02e-16 | 427 |
somatic stem cell | 2.39e-16 | 433 |
lining cell | 1.84e-14 | 58 |
barrier cell | 1.84e-14 | 58 |
stem cell | 4.86e-14 | 441 |
endothelial cell of vascular tree | 6.13e-14 | 24 |
endothelial cell | 1.30e-13 | 36 |
blood vessel endothelial cell | 9.38e-12 | 18 |
embryonic blood vessel endothelial progenitor cell | 9.38e-12 | 18 |
meso-epithelial cell | 4.65e-11 | 45 |
connective tissue cell | 1.54e-10 | 361 |
mesenchymal cell | 3.94e-10 | 354 |
fibroblast | 2.32e-08 | 76 |
vascular associated smooth muscle cell | 2.49e-08 | 32 |
smooth muscle cell | 5.69e-08 | 43 |
smooth muscle myoblast | 5.69e-08 | 43 |
squamous epithelial cell | 7.77e-08 | 63 |
endothelial cell of artery | 2.91e-07 | 9 |
muscle cell | 3.46e-07 | 55 |
muscle precursor cell | 4.61e-07 | 58 |
myoblast | 4.61e-07 | 58 |
multi-potent skeletal muscle stem cell | 4.61e-07 | 58 |
motile cell | 4.64e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
cardiovascular system | 9.21e-22 | 109 |
circulatory system | 2.11e-20 | 112 |
vessel | 5.42e-20 | 68 |
vasculature | 3.82e-19 | 78 |
vascular system | 3.82e-19 | 78 |
splanchnic layer of lateral plate mesoderm | 4.13e-18 | 83 |
epithelial tube open at both ends | 1.64e-16 | 59 |
blood vessel | 1.64e-16 | 59 |
blood vasculature | 1.64e-16 | 59 |
vascular cord | 1.64e-16 | 59 |
lateral plate mesoderm | 3.64e-15 | 203 |
artery | 5.48e-15 | 42 |
arterial blood vessel | 5.48e-15 | 42 |
arterial system | 5.48e-15 | 42 |
mesoderm | 1.00e-12 | 315 |
mesoderm-derived structure | 1.00e-12 | 315 |
presumptive mesoderm | 1.00e-12 | 315 |
blood vessel endothelium | 9.38e-12 | 18 |
endothelium | 9.38e-12 | 18 |
cardiovascular system endothelium | 9.38e-12 | 18 |
systemic artery | 7.94e-11 | 33 |
systemic arterial system | 7.94e-11 | 33 |
connective tissue | 5.06e-10 | 371 |
simple squamous epithelium | 2.54e-09 | 22 |
epithelial tube | 3.35e-09 | 117 |
squamous epithelium | 1.21e-08 | 25 |
epithelial vesicle | 1.15e-07 | 78 |
endothelial tube | 2.91e-07 | 9 |
arterial system endothelium | 2.91e-07 | 9 |
endothelium of artery | 2.91e-07 | 9 |
unilaminar epithelium | 3.52e-07 | 148 |