FFCP PHASE1:Hg19::chr11:57417359..57417366,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:57417359..57417366,- to FFCP PHASE1:Hg19::chr11:57417359..57417366,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=219539 | |EntrezGene=219539 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18328 | |HGNC=18328 | ||
|TSSclassifier=strong | |||
|UniProt=E9PRC4 | |UniProt=E9PRC4 | ||
|association_with_transcript=10bp_to_ENST00000532314_5end | |||
|cluster_id=chr11:57417359..57417366,- | |||
|description=CAGE_peak_3_at_YPEL4_5end | |||
|id=chr11:57417359..57417366,- | |||
|ontology_enrichment_celltype=CL:0000839!2.45e-13!70;CL:0000738!2.66e-13!140;CL:0002009!5.24e-13!65;CL:0000557!7.42e-13!71;CL:0002057!1.54e-12!42;CL:0000766!4.01e-12!76;CL:0002031!6.79e-12!124;CL:0002194!1.79e-11!63;CL:0000576!1.79e-11!63;CL:0000040!1.79e-11!63;CL:0000559!1.79e-11!63;CL:0000860!3.32e-11!45;CL:0000037!1.72e-10!172;CL:0000566!1.72e-10!172;CL:0000763!3.81e-10!112;CL:0000049!3.81e-10!112;CL:0002087!1.13e-09!119;CL:0000451!1.34e-09!10;CL:0000988!1.46e-09!182;CL:0002032!2.93e-09!165;CL:0000837!2.93e-09!165;CL:0000990!9.63e-08!8;CL:0000840!1.83e-07!5;CL:0001029!1.83e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000860;8.26e-17;33!CL:0002057;8.26e-17;33!CL:0000473;2.37e-13;39!CL:0000234;2.37e-13;39!CL:0000764;2.17e-10;2!CL:0000558;2.17e-10;2!CL:0000576;3.89e-08;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.50e-14,42;CL:0002057,3.50e-14,42;CL:0000473,3.78e-14,48;CL:0000234,3.78e-14,48;CL:0000839,1.22e-12,66;CL:0002009,5.18e-12,61;CL:0002194,1.05e-10,59;CL:0000576,1.05e-10,59;CL:0000040,1.05e-10,59;CL:0000559,1.05e-10,59;CL:0000557,1.17e-10,67;CL:0000764,2.19e-10,2;CL:0000765,2.19e-10,2;CL:0000050,2.19e-10,2;CL:0000038,2.19e-10,2;CL:0000558,2.19e-10,2;CL:0000547,2.19e-10,2;CL:0000549,2.19e-10,2;CL:0000550,2.19e-10,2;CL:0000552,2.19e-10,2;CL:0000766,2.87e-08,72;CL:0000763,1.83e-07,108;CL:0000049,1.83e-07,108;CL:0002031,2.64e-07,120 | |||
|ontology_enrichment_development_v019=CL:0002057;2.66e-11;42!UBERON:0006601;2.07e-08;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.93e-27!57;UBERON:0005068!2.93e-27!57;UBERON:0006241!2.93e-27!57;UBERON:0007135!2.93e-27!57;UBERON:0007023!1.06e-26!115;UBERON:0002616!6.26e-23!59;UBERON:0001017!1.54e-22!82;UBERON:0002780!5.53e-22!41;UBERON:0001890!5.53e-22!41;UBERON:0006240!5.53e-22!41;UBERON:0005743!9.15e-22!86;UBERON:0000955!3.04e-21!69;UBERON:0006238!3.04e-21!69;UBERON:0003080!3.14e-21!42;UBERON:0000073!3.46e-19!94;UBERON:0001016!3.46e-19!94;UBERON:0002020!3.53e-18!34;UBERON:0003528!3.53e-18!34;UBERON:0001893!5.27e-18!34;UBERON:0001869!5.47e-18!32;UBERON:0001950!1.68e-17!20;UBERON:0002619!1.96e-17!22;UBERON:0002791!6.64e-17!33;UBERON:0003075!1.54e-16!86;UBERON:0007284!1.54e-16!86;UBERON:0002346!3.20e-15!90;UBERON:0002390!1.00e-14!102;UBERON:0003061!1.00e-14!102;UBERON:0000956!1.07e-14!25;UBERON:0000203!1.07e-14!25;UBERON:0002193!5.64e-13!112;UBERON:0003056!1.54e-12!61;UBERON:0000153!2.14e-10!129;UBERON:0007811!2.14e-10!129;UBERON:0002371!2.75e-10!80;UBERON:0000033!4.64e-09!123;UBERON:0001871!5.17e-09!7;UBERON:0001474!6.61e-09!86;UBERON:0004765!1.88e-07!101;UBERON:0001434!1.88e-07!101;UBERON:0002405!2.37e-07!115;UBERON:0003076!3.18e-07!15;UBERON:0003057!3.18e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;5.28e-42;20!UBERON:0002619;4.81e-38;22!UBERON:0000956;3.01e-33;25!UBERON:0000203;3.01e-33;25!UBERON:0001869;3.87e-29;32!UBERON:0001893;5.72e-28;34!UBERON:0003528;4.76e-26;34!UBERON:0002020;4.76e-26;34!UBERON:0002791;4.78e-26;32!UBERON:0002780;1.16e-25;41!UBERON:0001890;1.16e-25;41!UBERON:0000073;2.63e-19;53!UBERON:0002616;2.63e-19;53!UBERON:0001871;5.44e-15;6!UBERON:0002021;1.25e-13;5!UBERON:0000955;8.70e-12;68!UBERON:0000200;1.06e-11;6!UBERON:0001017;1.52e-11;75!UBERON:0002784;3.16e-10;4!UBERON:0001016;5.73e-10;83!UBERON:0001894;7.11e-10;7!UBERON:0001905;9.56e-10;2!UBERON:0002757;9.56e-10;2!UBERON:0010134;9.56e-10;2!UBERON:0005408;9.56e-10;2!UBERON:0001899;9.56e-10;2!UBERON:0002771;1.54e-09;2!UBERON:0007023;6.11e-09;114!UBERON:0001872;1.93e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,1.70e-41,20;UBERON:0002780,7.62e-39,41;UBERON:0001890,7.62e-39,41;UBERON:0003080,7.62e-39,41;UBERON:0006240,7.62e-39,41;UBERON:0000073,1.06e-38,53;UBERON:0002616,1.06e-38,53;UBERON:0002619,1.39e-37,22;UBERON:0001049,2.35e-36,56;UBERON:0005068,2.35e-36,56;UBERON:0006241,2.35e-36,56;UBERON:0007135,2.35e-36,56;UBERON:0000956,7.65e-33,25;UBERON:0000203,7.65e-33,25;UBERON:0001869,1.61e-32,32;UBERON:0000955,3.25e-31,68;UBERON:0006238,3.25e-31,68;UBERON:0001893,1.98e-30,34;UBERON:0003528,2.14e-30,34;UBERON:0002020,2.14e-30,34;UBERON:0002791,1.30e-28,32;UBERON:0001017,8.47e-28,81;UBERON:0007023,2.47e-26,114;UBERON:0003056,1.15e-24,61;UBERON:0001016,1.81e-24,89;UBERON:0003075,3.78e-23,82;UBERON:0007284,3.78e-23,82;UBERON:0002346,8.06e-22,86;UBERON:0010371,4.21e-17,104;UBERON:0001871,7.70e-15,6;UBERON:0002021,1.05e-13,5;UBERON:0010314,1.08e-13,132;UBERON:0000200,8.19e-12,6;UBERON:0002784,2.31e-10,4;UBERON:0004121,4.35e-10,171;UBERON:0000924,4.35e-10,171;UBERON:0006601,4.35e-10,171;UBERON:0001894,6.43e-10,7;UBERON:0006222,6.43e-10,7;UBERON:0001905,9.40e-10,2;UBERON:0002757,9.40e-10,2;UBERON:0010134,9.40e-10,2;UBERON:0005408,9.40e-10,2;UBERON:0001899,9.40e-10,2;UBERON:0002390,1.08e-09,98;UBERON:0003061,1.08e-09,98;UBERON:0002771,1.39e-09,2;UBERON:0002371,4.96e-09,76;UBERON:0002193,1.94e-08,108;UBERON:0001872,2.37e-08,5;UBERON:0001474,3.80e-08,82;UBERON:0001434,3.47e-07,100;UBERON:0011216,3.51e-07,223;UBERON:0004765,3.72e-07,90;UBERON:0000025,7.60e-07,192;UBERON:0002405,7.90e-07,93 | |||
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| ||
|short_description=p3@YPEL4 | |||
}} | }} |
Latest revision as of 10:37, 18 September 2015
Short description: | p3@YPEL4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_YPEL4_5end |
Coexpression cluster: | NA |
Association with transcript: | 10bp_to_ENST00000532314_5end |
EntrezGene: | YPEL4 |
HGNC: | 18328 |
UniProt: | E9PRC4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.50e-14 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.50e-14 | 42 |
defensive cell | 3.78e-14 | 48 |
phagocyte | 3.78e-14 | 48 |
myeloid lineage restricted progenitor cell | 1.22e-12 | 66 |
macrophage dendritic cell progenitor | 5.18e-12 | 61 |
monopoietic cell | 1.05e-10 | 59 |
monocyte | 1.05e-10 | 59 |
monoblast | 1.05e-10 | 59 |
promonocyte | 1.05e-10 | 59 |
granulocyte monocyte progenitor cell | 1.17e-10 | 67 |
erythroid lineage cell | 2.19e-10 | 2 |
erythroblast | 2.19e-10 | 2 |
megakaryocyte-erythroid progenitor cell | 2.19e-10 | 2 |
erythroid progenitor cell | 2.19e-10 | 2 |
reticulocyte | 2.19e-10 | 2 |
proerythroblast | 2.19e-10 | 2 |
basophilic erythroblast | 2.19e-10 | 2 |
polychromatophilic erythroblast | 2.19e-10 | 2 |
orthochromatic erythroblast | 2.19e-10 | 2 |
myeloid leukocyte | 2.87e-08 | 72 |
myeloid cell | 1.83e-07 | 108 |
common myeloid progenitor | 1.83e-07 | 108 |
hematopoietic lineage restricted progenitor cell | 2.64e-07 | 120 |