FFCP PHASE1:Hg19::chr11:27494245..27494278,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:27494245..27494278,- to FFCP PHASE1:Hg19::chr11:27494245..27494278,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55366 | |EntrezGene=55366 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13299 | |HGNC=13299 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BXB1 | |UniProt=Q9BXB1 | ||
|association_with_transcript=14bp_to_ENST00000379214_5end | |||
|cluster_id=chr11:27494245..27494278,- | |||
|coexpression_cluster_id=C2125 | |||
|description=CAGE_peak_5_at_LGR4_5end | |||
|id=chr11:27494245..27494278,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002322;6.28e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,1.49e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!1.22e-11!659;UBERON:0000062!1.45e-10!511;UBERON:0000467!1.11e-09!625;UBERON:0000480!1.61e-09!626;UBERON:0000481!1.71e-08!347;UBERON:0000922!5.70e-08!612;UBERON:0001048!1.22e-07!168 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0.428201047781966,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0.37129905888014,0,0.672325146451775,0,0,0.487932798790507,0.61560529038394,0.612002073732759,0.313454721478088,0,0.273748850145768,0.251085279189606,0,0,0,0,0.383829398097213,0,0,0.30120591877825,0.369754010166788,0,0,0,0,0,0.217010870715852,0,0.32389366601898,0,0,0.377875943688809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,1.34140171940727,0.12786256184353,0.722878304769133,1.00267582127178,0.144846518960824,0,0.486634870302636,6.90104165297695,5.5432349365641,6.58760892698445,1.11332214173056,1.09288586487763,0,0.649094787309367,0.348259474598534,0.132957960518865,0,0,0,0.198762407366705,0,0.347140501607594,0,0.419499436209906,0,0,0,0,0,0,0,0,0.735326160691737,0,0.0892997282840798,0,0,0,0.949265659568129,0.183201743930407,0,0,0.436094052142534,0,0.379891534993739,0.662045904066094,1.14734648299525,0.354668382198357,0.560677600142307,3.20246987189115,2.71334303258876,0.622422070799533,0.269421344139376,0.490385709340376,0.454072282934794,0.576175924479999,0,0,0,0,0,0.161872944368132,0.140450806702248,0.204154171254893,0.245668634623536,0,0,0,0,0,0,0.250237039743928,0,0,0,0.150238058906597,0.794025282120147,0.89694817844431,1.06778694409284,1.05965950579781,0.600182192168805,0.412210116953756,1.03056216018252,0.37223371266318,1.35021065793013,1.16924406193438,0,0.460249493211497,0.646584227275248,1.06502877754984,1.20902517873168,0.339121184620975,0.193260853163297,0.818238361772504,0.573609190778008,1.09776335516636,3.04818467139416,1.04574548582567,1.34759371519982,2.27088765788066,1.09493207722749,1.56449532329816,0.643240938192885,0,0,0.721879481669586,0.591534000199219,0.337169380156203,0.723033089650446,0.441175890929576,0,1.42362371466658,0.674156540800822,0,0,0,0,0.4115740113314,0,0,0,1.77236972004421,0,1.10689594688802,0.857839051492628,0.548751427043128,0,0.201057944823262,0.277765335475589,0,0,0,5.79652024875384,5.63561732331944,0,0,0,0,0,0,0.234004265139238,0.148631162288728,0,0.335964256397719,0.425325291727159,0.0895585227028483,0.290633938513962,0.766765358330422,0,0,0.207328115540772,0,0,0,0,0,0,0.102827492703324,0,0,0.112131084345361,0.87192013766656,0.1466765716419,0,0,0,0.26593811658487,0,0.257207374262142,0,0,0.142977993658148,0,0,0,0,0,0,0,0.199945982364114,0,0,0,1.19812427745791,2.29723871668228,0,0.144781306667579,0.205476322550383,0,0,0,0,0,1.01637849688985,0,0,0,0,0,0,0,0.12269149171914,0,0,0.207970861530807,0.178428988797162,0,0.35142424497814,0.300946099727719,0,0,3.98535359121262,2.58116835958384,0.0868836144680828,0,0,0,0,0,0,0,0,0.248107807818777,0,0,0,0.511707249066704,0.160853921143607,0,0,0,0.246381468041427,0,0.116210378459959,0.120859449591622,0.601519410909855,0.0920809889358963,0,0.182091168006717,0.131124414959424,0.451199612907412,0.770153371044148,0,0,0.527758144464379,0,0.340187410553031,0.863663664408557,0,1.08378575017541,0,1.01950509218015,0,0.223874754722178,0,0,0,0.328014645699706,0.325378394664303,2.47298427954533,0.457847324091717,0.330037999682352,0,0,0,0.386682873168488,0,0,0,0.107420244868274,0,0.255679882248303,2.1367688555217,0,0.192190067365106,0.638063562472921,0,0,0.31481234683064,0.6970372701606,1.54016790088044,1.06461206063404,0.869932992075073,0.9266210955196,1.86062352764589,0.744316738719335,1.2655176988749,0.190630193923825,0,0,0,1.56989728039846,0.179872457583315,0.274537029736055,0,0.808729926293264,0,0.842516912477962,0,0.731140468893853,0,0,0,0,2.2054613741845,1.99031692572366,1.31535265576129,0,0,0.405820753925408,0,0,0,0.196498082026242,1.78335525740625,0,0.633322905892992,1.31717957183961,0,0,0.0962221127255121,0,1.08890984861323,1.50630081242847,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0.735120647943095,0,0,0,0,0,0,0,0.324621940274555,0,0,0,0,0,0,0,0,0,0,0.223676107892416,0,0,0,0,0,0.33307196799782,0,0.748562161632879,0.586032717087576,0.121360521749513,0.222886768554957,0,3.10367830158997,0,0.921482106297696,0,0.281338832821026,1.00177834520615,0,0.422250816255987,1.9924798825107,0.828851746593443,0.503865495708552,0.818149460017238,0.123084805461069,0.933118762985422,0.449341755736634,1.9692329214317,0,1.28236427328014,0,0,0,0.0927680981618513,0,0.520855522170466,0.0874599999961957,0,0.682760689712998,0,0,0,0,0.347249989866585,0,0,1.52581736317083,0.552896299656123,0.295547618953547,0.438770794307945,0.762569244632931,1.39423744278603,0.538651809526579,0.113942055847001,0.922255617552241,2.78248697670294,1.73835795075213,5.10401855571071,0.274792780205587,2.66517388009317,0,0,0.166211681900156,0,0.19606253431774,0,0,0,0.632994193584081,0.816164040795739,0.424059214301822,0.649165919226273,1.99052386215701,1.32686346755009,0.611030144933625,0,0,0,0.404406797884062,1.60515529459758,0.234264445725339,0,0,0,1.57833761139756,0,0,1.01098527405581,0.150323419414493,0.207376382794494,0,0,0,0,0.8538286380893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|short_description=p5@LGR4 | |||
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Latest revision as of 12:09, 17 September 2015
Short description: | p5@LGR4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_LGR4_5end |
Coexpression cluster: | C2125_gastric_signet_Lens_Ciliary_lung_Hepatocyte_kidney |
Association with transcript: | 14bp_to_ENST00000379214_5end |
EntrezGene: | LGR4 |
HGNC: | 13299 |
UniProt: | Q9BXB1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 1.49e-07 | 5 |