FFCP PHASE1:Hg19::chr11:22696465..22696478,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2620 | |EntrezGene=2620 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4167 | |HGNC=4167 | ||
|TSSclassifier=strong | |||
|UniProt=O43903 | |UniProt=O43903 | ||
|association_with_transcript=49bp_to_AB590780,CR450285_5end | |||
|cluster_id=chr11:22696465..22696478,+ | |||
|coexpression_cluster_id=C55 | |||
|description=CAGE_peak_15_at_GAS2_5end | |||
|id=chr11:22696465..22696478,+ | |||
|ontology_enrichment_celltype=CL:0000181!3.24e-18!12;CL:0000417!3.24e-18!12;CL:0000668!3.24e-18!12;CL:0000414!3.24e-18!12;CL:0000412!3.24e-18!12;CL:0000182!3.24e-18!12;CL:0000223!1.40e-08!59;CL:0002563!5.69e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0000182;2.46e-32;12!CL:0002253;6.67e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.46e-32,12;CL:0000223,1.35e-12,58;CL:0002253,8.09e-09,2 | |||
|ontology_enrichment_development_v019=UBERON:0004161;8.35e-23;11!UBERON:0009497;2.33e-19;13!UBERON:0003104;1.94e-12;31!UBERON:0001041;1.47e-08;30!CL:0000223;2.22e-08;58 | |||
|ontology_enrichment_disease=DOID:2355!6.20e-07!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!3.31e-15!19;UBERON:0006925!3.31e-15!19;UBERON:0008836!3.31e-15!19;UBERON:0009497!1.32e-14!25;UBERON:0000015!1.32e-14!25;UBERON:0002423!1.32e-14!25;UBERON:0006235!1.32e-14!25;UBERON:0004161!1.32e-14!25;UBERON:0005057!6.39e-14!26;UBERON:0003929!7.42e-14!54;UBERON:0008835!5.23e-13!22;UBERON:0003894!5.23e-13!22;UBERON:0009854!2.11e-12!23;UBERON:0007499!2.46e-11!25;UBERON:0009856!7.28e-11!26;UBERON:0002368!5.00e-10!35;UBERON:0005911!7.55e-10!82;UBERON:0005172!2.52e-09!55;UBERON:0005173!2.52e-09!55;UBERON:0002365!5.81e-09!31;UBERON:0002330!5.81e-09!31;UBERON:0004921!1.88e-08!129;UBERON:0004185!1.88e-08!129;UBERON:0002417!3.11e-08!61;UBERON:0000916!3.11e-08!61;UBERON:0004119!1.42e-07!169;UBERON:0000925!1.42e-07!169;UBERON:0006595!1.42e-07!169;UBERON:0000949!1.57e-07!45;UBERON:0001007!1.64e-07!155;UBERON:0001555!1.64e-07!155;UBERON:0007026!1.64e-07!155;UBERON:0001301!2.23e-07!1;UBERON:0001242!5.69e-07!4;UBERON:0001262!5.69e-07!4;UBERON:0004786!5.69e-07!4;UBERON:0004808!5.69e-07!4;UBERON:0001277!5.69e-07!4;UBERON:0002530!6.26e-07!59;UBERON:0005177!6.36e-07!107 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;4.89e-29;19!UBERON:0006925;4.89e-29;19!UBERON:0002423;4.78e-22;25!UBERON:0002365;2.89e-17;31!UBERON:0002330;2.89e-17;31!UBERON:0002368;3.03e-14;33!UBERON:0000949;1.05e-11;43!UBERON:0002530;1.02e-08;57!UBERON:0005172;6.08e-07;52!UBERON:0005173;6.08e-07;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,4.55e-29,19;UBERON:0006925,4.55e-29,19;UBERON:0008836,4.55e-29,19;UBERON:0008835,4.29e-25,22;UBERON:0003894,4.29e-25,22;UBERON:0009854,5.34e-24,23;UBERON:0007499,4.53e-22,25;UBERON:0009497,4.53e-22,25;UBERON:0000015,4.53e-22,25;UBERON:0002423,4.53e-22,25;UBERON:0006235,4.53e-22,25;UBERON:0004161,4.53e-22,25;UBERON:0009856,3.23e-21,26;UBERON:0002365,9.00e-18,31;UBERON:0002330,9.00e-18,31;UBERON:0003929,1.28e-17,54;UBERON:0002368,1.01e-15,35;UBERON:0002530,2.09e-12,59;UBERON:0000949,3.51e-12,45;UBERON:0005911,2.17e-11,82;UBERON:0005172,4.13e-10,54;UBERON:0005173,4.13e-10,54;UBERON:0002417,4.51e-09,60;UBERON:0000916,4.51e-09,60;UBERON:0004921,1.25e-07,118 | |||
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|short_description=p15@GAS2 | |||
}} | }} |
Latest revision as of 09:43, 17 September 2015
Short description: | p15@GAS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_GAS2_5end |
Coexpression cluster: | C55_hepatocellular_Intestinal_liver_Prostate_fibrosarcoma_Hepatocyte_hepatoblastoma |
Association with transcript: | 49bp_to_AB590780, CR450285_5end |
EntrezGene: | GAS2 |
HGNC: | 4167 |
UniProt: | O43903 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.46e-32 | 12 |
endodermal cell | 1.35e-12 | 58 |
epithelial cell of large intestine | 8.09e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
liver | 4.55e-29 | 19 |
digestive gland | 4.55e-29 | 19 |
liver bud | 4.55e-29 | 19 |
hepatic diverticulum | 4.29e-25 | 22 |
liver primordium | 4.29e-25 | 22 |
digestive tract diverticulum | 5.34e-24 | 23 |
epithelial sac | 4.53e-22 | 25 |
epithelium of foregut-midgut junction | 4.53e-22 | 25 |
anatomical boundary | 4.53e-22 | 25 |
hepatobiliary system | 4.53e-22 | 25 |
foregut-midgut junction | 4.53e-22 | 25 |
septum transversum | 4.53e-22 | 25 |
sac | 3.23e-21 | 26 |
exocrine gland | 9.00e-18 | 31 |
exocrine system | 9.00e-18 | 31 |
gut epithelium | 1.28e-17 | 54 |
endocrine gland | 1.01e-15 | 35 |
gland | 2.09e-12 | 59 |
endocrine system | 3.51e-12 | 45 |
endo-epithelium | 2.17e-11 | 82 |
abdomen element | 4.13e-10 | 54 |
abdominal segment element | 4.13e-10 | 54 |
abdominal segment of trunk | 4.51e-09 | 60 |
abdomen | 4.51e-09 | 60 |
subdivision of digestive tract | 1.25e-07 | 118 |