FFCP PHASE1:Hg19::chr11:2152974..2153103,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:2152974..2153103,+ to FFCP PHASE1:Hg19::chr11:2152974..2153103,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3481 | |EntrezGene=3481 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=5466 | |HGNC=5466 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-60bp_to_AK074614_5end | |||
|cluster_id=chr11:2152974..2153103,+ | |||
|coexpression_cluster_id=C172 | |||
|description=CAGE_peak_10_at_IGF2_5end | |||
|id=chr11:2152974..2153103,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000349;1.84e-11;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,2.03e-11,19 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.84e-13!115;UBERON:0000468!7.10e-11!659;UBERON:0000481!1.20e-10!347;UBERON:0005631!2.18e-10!14;UBERON:0000158!2.18e-10!14;UBERON:0000922!8.53e-09!612;UBERON:0002616!2.76e-08!59;UBERON:0004119!4.60e-08!169;UBERON:0000925!4.60e-08!169;UBERON:0006595!4.60e-08!169;UBERON:0000062!6.36e-08!511;UBERON:0001049!1.19e-07!57;UBERON:0005068!1.19e-07!57;UBERON:0006241!1.19e-07!57;UBERON:0007135!1.19e-07!57;UBERON:0000478!1.52e-07!24;UBERON:0000064!1.89e-07!219;UBERON:0002050!2.07e-07!605;UBERON:0005423!2.07e-07!605;UBERON:0000475!2.85e-07!365;UBERON:0001017!2.94e-07!82;UBERON:0000923!4.01e-07!604;UBERON:0005291!4.01e-07!604;UBERON:0006598!4.01e-07!604;UBERON:0002532!4.01e-07!604;UBERON:0005743!4.61e-07!86;UBERON:0000955!8.41e-07!69;UBERON:0006238!8.41e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;1.12e-10;24!UBERON:0005631;4.93e-10;10!UBERON:0000158;4.93e-10;10!UBERON:0000305;2.51e-07;7!UBERON:0001134;2.91e-07;16!UBERON:0002036;2.91e-07;16!UBERON:0000922;7.81e-07;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.84e-13,14;UBERON:0000158,1.84e-13,14;UBERON:0000478,1.22e-10,24;UBERON:0003104,1.65e-09,160;UBERON:0009142,1.65e-09,160;UBERON:0006554,4.86e-08,47;UBERON:0003124,8.68e-08,7;UBERON:0001008,1.09e-07,48;UBERON:0000305,2.73e-07,7;UBERON:0004119,3.82e-07,160;UBERON:0000925,3.82e-07,160;UBERON:0006595,3.82e-07,160;UBERON:0011216,4.90e-07,223;UBERON:0000119,9.43e-07,309 | |||
|phase1_expression=6.7221000330106,4.06790995392868,0.563817616383885,10.007329835313,6.25745532198203,29.6595098194125,0,0.631719873426831,0.261185628199839,1.96587149201207,8.37361401566913,162.738822236978,226.048300341785,4.08428964768154,10.2733186475654,0,0,0,0,1.84681587115182,24.0720815668219,11.5978246946892,0,0,0.627713197974014,0,0.0821005894499457,0,0,0,2.47705797305722,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0.242584061187816,0.232429036905685,0.411167888021826,0.619412741790207,0,0,0,0.344745680736619,0,1.35426486594342,0,0,0,0.306083892370903,0.320929027076094,0,0,0.199463657621632,0.426224750532694,0,0.56738522469114,0,0,0.521482918420201,0.217188844705117,3.02699751316684,0,0,0.211255286311942,0,0,0,0.150176892841506,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.94826728407911,0.222820913770347,0,0.221533894583621,0.270803863765016,0,0,0.164437904603676,0,0.579606171470105,0,0.267540828089713,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0.12786256184353,0,1.50401373190767,11.5877215168659,0,1.45990461090791,0.283604451492204,2.21729397462564,1.93236528524877,1.11332214173056,0,0,0.324547393654683,0,0,0,0,0,0.198762407366705,0,0,0,0.419499436209906,1.92582629358047,0.626984899610432,0.258416759169329,0,0.33472061276467,0,0,0,0,6.48113558305408,0,0,0.225222960966644,0,0,1.28241220751285,0,0,1.3082821564276,0.496971951695318,0,0,0,0,2.24271040056923,0,0.49333509683432,0.311211035399766,0.404132016209064,0.163461903113459,12.4113090668844,38.0276110156799,0.937285727335186,0.312160076830321,0,0.149448680551801,0,0,0,0.204154171254893,1.10550885580591,0,4.75201142912821,27.6938960791984,0,0.718618141816238,1.0100166837244,1.25118519871964,0.277064115484183,2.19488810440419,0.919463387397059,1.95309476578576,0.453728732640084,0,0.640672166455702,0.211931901159562,0,0.103052529238439,0,0,0.168776332241266,0,0,0.276149695926898,4.0411514204703,0,0,0.169560592310488,0,0,0,0.121973706129595,0.132529768321485,11.1546185154738,6.11600224590686,4.79409616663694,0,0,0,0,41.3287455948461,0.721879481669586,0,0,0.241011029883482,0.110293972732394,0.435758888184812,0,0,0.196221465125346,0.38474715694639,0.738155454624648,0,0.8231480226628,20.5812195939759,36.7589600983309,8.84544495009863,49.0355622545565,0,94.8240861167405,0.171567810298526,0,0,0,3.79612625149971,0,0,0,1.73895607462615,0.117408694235822,0,0,0,0.790204397959275,1.71697232418975,0,0,0,0,0.503946384596579,0,0.0895585227028483,0,0,0,0,0,0.144119953416961,0,0.063497894292169,0,0,0,0.102827492703324,0.300343057843917,0.285826432630578,1.12131084345361,16.1305225468314,0.8800594298514,0.129271715757778,0,0,4.25500986535793,7.28052058379563,2.05765899409714,15.6034045225606,4.52917704327369,23.8773249409106,185.033967438482,11.5253647149308,0,6.39705507736582,10.2953743481346,0,0,0.299918973546171,0,0,2.10833939483032,0,0,0,5.79125226670317,10.4792924500696,2.14873155887875,0,0,0,0,0,0,0.773288812777695,0,0.637938751653163,0,0,0,22.5752344763217,71.5243845115338,18.7172866352818,28.2840371681898,22.4820525884424,15.6125390883595,20.2654647937394,1.20378439891088,0,8.27784570340039,0.664225598535437,1.84369168541703,0,202.654197973936,569.961226949832,0,0,0.213455115606889,21.5220575726844,54.923695038464,202.299106237556,0.992431231275107,2.14846762603287,2.80660094433074,0,2.04682899626681,4.66476371316462,11.8734453155993,0,0,0,1.03850885836724,0,85.9310686596434,1.80455823272956,0.920809889358963,4.01850568576124,6.3731908802351,9.70320670699738,1.80479845162965,3.85076685522074,0,0,0.633309773357254,0,1.19065593693561,8.63663664408557,20.0495428497376,4.87703587578935,11.5388647986616,0,0,1.11937377361089,2.19259876645935,0.261435451024901,0,0.656029291399411,0,13.8074955607948,0.27470839445503,0.330037999682352,0,0,0,5.12354806948246,1.23238893691716,1.84204409671355,7.85668463161824,0.644521469209642,4.49551751134108,5.02837101754995,113.159717307003,1.65284915360978,4.42037154939744,0.510450849978337,2.8324178639554,0,0.62962469366128,0,0,0,0,0,0,2.60510858551767,6.32758849437452,8.19709833872447,1.27948895655667,10.698474700848,0,0,7.01502584574927,2.74537029736055,4.71249609382746,0,0,0,2.92580243453754,0,0,23.0684850279496,1.83827061539827,0,0.551365343546124,0,0,1.15755106853338,0,0,0.30982349809975,0,1.86434757865267,6.58268574787912,0,0,0,1.31717957183961,1.51789269506286,7.34862912514464,0.865999014529609,0,0,11.3913998939903,10.3321289441095,1.68471475667626,17.737206141467,15.8509146142802,0.507447609232169,0,0,0,0,0,0,0,0.320472213382419,0,0,0,0,0,0.159426272728822,0.199579371432817,0,0,0,0,0,0.156679895773023,0,0,0,0,0,0,0,0,0,0,0,7.38524393686274,0.270455678475983,0,1.4098700508785,0,2.4906390476222,0,0,5.68272293612826,219.883670443413,89.9802982922895,317.911326672705,2.98244294329889,0.281338832821026,0.111308705022906,0,26.3906760159992,11.556383318562,0.276283915531148,1.0077309914171,0,0,0,0,0,0,1.87422470710174,0,0,0.969332746095218,0.463840490809256,0,0,0.0874599999961957,2.89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| ||
|short_description=p10@IGF2 | |||
}} | }} |
Latest revision as of 07:39, 17 September 2015
Short description: | p10@IGF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_IGF2_5end |
Coexpression cluster: | C172_chorionic_skeletal_tongue_amniotic_liver_gastrointestinal_Pericytes |
Association with transcript: | -60bp_to_AK074614_5end |
EntrezGene: | IGF2 |
HGNC: | 5466 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 2.03e-11 | 19 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.84e-13 | 14 |
membranous layer | 1.84e-13 | 14 |
extraembryonic structure | 1.22e-10 | 24 |
mesenchyme | 1.65e-09 | 160 |
entire embryonic mesenchyme | 1.65e-09 | 160 |
urinary system structure | 4.86e-08 | 47 |
chorion | 8.68e-08 | 7 |
renal system | 1.09e-07 | 48 |
amnion | 2.73e-07 | 7 |
endoderm-derived structure | 3.82e-07 | 160 |
endoderm | 3.82e-07 | 160 |
presumptive endoderm | 3.82e-07 | 160 |
organ system subdivision | 4.90e-07 | 223 |
cell layer | 9.43e-07 | 309 |