FFCP PHASE1:Hg19::chr11:124767693..124767774,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:124767693..124767774,- to FFCP PHASE1:Hg19::chr11:124767693..124767774,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=54538 | |EntrezGene=54538 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17985 | |HGNC=17985 | ||
|TSSclassifier=strong | |||
|UniProt=F8W857,B4DYV8 | |UniProt=F8W857,B4DYV8 | ||
|association_with_transcript=0bp_to_ENST00000374963,ENST00000529941,ENST00000533054,ENST00000533337_5end | |||
|cluster_id=chr11:124767693..124767774,- | |||
|coexpression_cluster_id=C140 | |||
|description=CAGE_peak_1_at_ROBO4_5end | |||
|id=chr11:124767693..124767774,- | |||
|ontology_enrichment_celltype=CL:0002139!7.73e-19!24;CL:0000115!2.19e-18!35;CL:0000071!1.36e-14!18;CL:0002546!1.36e-14!18;CL:0002078!3.11e-14!44;CL:0000213!8.84e-09!57;CL:0000215!8.84e-09!57;CL:0000222!1.48e-08!119;CL:1000413!4.49e-08!9 | |||
|ontology_enrichment_celltype_v019=CL:0002139;7.07e-23;24!CL:0000115;9.49e-19;36!CL:0000071;1.23e-17;18!CL:0002078;5.42e-11;45!CL:1000413;1.34e-09;9!CL:0000213;3.42e-07;58!CL:0000215;3.42e-07;58!CL:0002544;6.47e-07;6!CL:0002543;7.24e-07;6!CL:0002138;8.62e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,7.19e-23,24;CL:0000115,3.26e-22,36;CL:0000071,1.25e-17,18;CL:0002546,1.25e-17,18;CL:0002078,1.45e-16,45;CL:0000213,2.85e-10,58;CL:0000215,2.85e-10,58;CL:1000413,1.36e-09,9;CL:0002544,6.52e-07,6;CL:0002543,7.23e-07,6;CL:0005020,8.64e-07,6;CL:0002138,8.64e-07,6;CL:0005022,8.64e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002546;1.23e-17;18!CL:0005022;8.62e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.05e-38!115;UBERON:0004111!3.73e-32!241;UBERON:0000477!1.13e-30!286;UBERON:0000119!2.90e-29!312;UBERON:0000025!1.08e-28!194;UBERON:0000483!3.38e-28!309;UBERON:0001049!1.57e-19!57;UBERON:0005068!1.57e-19!57;UBERON:0006241!1.57e-19!57;UBERON:0007135!1.57e-19!57;UBERON:0003075!4.21e-19!86;UBERON:0007284!4.21e-19!86;UBERON:0002616!1.25e-17!59;UBERON:0000481!2.22e-17!347;UBERON:0000955!2.49e-17!69;UBERON:0006238!2.49e-17!69;UBERON:0005743!6.83e-17!86;UBERON:0002346!7.65e-17!90;UBERON:0001017!3.00e-16!82;UBERON:0004872!1.11e-15!84;UBERON:0002049!1.43e-15!79;UBERON:0007798!1.43e-15!79;UBERON:0003914!3.82e-15!118;UBERON:0000055!4.05e-15!69;UBERON:0001009!1.04e-14!113;UBERON:0000073!1.16e-14!94;UBERON:0001016!1.16e-14!94;UBERON:0001986!1.36e-14!18;UBERON:0004638!1.36e-14!18;UBERON:0004852!1.36e-14!18;UBERON:0000475!1.85e-14!365;UBERON:0003080!2.06e-14!42;UBERON:0000153!2.51e-14!129;UBERON:0007811!2.51e-14!129;UBERON:0000467!5.74e-14!625;UBERON:0000468!7.29e-14!659;UBERON:0000033!7.74e-14!123;UBERON:0002780!8.03e-14!41;UBERON:0001890!8.03e-14!41;UBERON:0006240!8.03e-14!41;UBERON:0000480!9.18e-14!626;UBERON:0004535!2.12e-13!110;UBERON:0003056!8.98e-13!61;UBERON:0000487!4.57e-12!22;UBERON:0001981!1.11e-11!60;UBERON:0007500!1.11e-11!60;UBERON:0004537!1.11e-11!60;UBERON:0006965!1.11e-11!60;UBERON:0002020!1.47e-11!34;UBERON:0003528!1.47e-11!34;UBERON:0001893!2.05e-11!34;UBERON:0002791!4.38e-11!33;UBERON:0001869!1.18e-10!32;UBERON:0000922!3.39e-10!612;UBERON:0004121!3.61e-10!169;UBERON:0006914!6.29e-10!25;UBERON:0002050!8.28e-10!605;UBERON:0005423!8.28e-10!605;UBERON:0000923!1.69e-09!604;UBERON:0005291!1.69e-09!604;UBERON:0006598!1.69e-09!604;UBERON:0002532!1.69e-09!604;UBERON:0002619!1.91e-09!22;UBERON:0003103!2.45e-09!69;UBERON:0000924!3.64e-09!173;UBERON:0006601!3.64e-09!173;UBERON:0000064!4.97e-09!219;UBERON:0001950!9.65e-09!20;UBERON:0007100!3.58e-08!27;UBERON:0000956!3.83e-08!25;UBERON:0000203!3.83e-08!25;UBERON:0003915!4.49e-08!9;UBERON:0004700!4.49e-08!9;UBERON:0001917!4.49e-08!9;UBERON:0000490!1.24e-07!138;UBERON:0002465!4.81e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.23e-17;18!UBERON:0001986;1.23e-17;18!UBERON:0004852;1.23e-17;18!UBERON:0000487;5.02e-15;22!UBERON:0007023;5.24e-13;114!UBERON:0006914;3.90e-12;25!UBERON:0000073;5.34e-12;53!UBERON:0002616;5.34e-12;53!UBERON:0002780;7.48e-12;41!UBERON:0001890;7.48e-12;41!UBERON:0003528;2.97e-11;34!UBERON:0002020;2.97e-11;34!UBERON:0002619;3.05e-11;22!UBERON:0001893;3.67e-11;34!UBERON:0002791;5.08e-11;32!UBERON:0001869;5.71e-11;32!UBERON:0001950;2.20e-10;20!UBERON:0003915;1.34e-09;9!UBERON:0004700;1.34e-09;9!UBERON:0001917;1.34e-09;9!UBERON:0000956;4.70e-09;25!UBERON:0000203;4.70e-09;25!UBERON:0007100;1.93e-08;25!UBERON:0002465;2.42e-08;10!UBERON:0000955;3.88e-08;68!UBERON:0001017;6.25e-08;75!UBERON:0000490;1.18e-07;33!UBERON:0001473;1.78e-07;8!UBERON:0004536;1.78e-07;8!UBERON:0006558;1.78e-07;8!UBERON:0001016;3.04e-07;83!UBERON:0000055;3.71e-07;65!UBERON:0004732;5.37e-07;13 | |||
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| ||
|short_description=p1@ROBO4 | |||
}} | }} |
Latest revision as of 12:15, 16 September 2015
Short description: | p1@ROBO4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ROBO4_5end |
Coexpression cluster: | C140_Renal_Endothelial_Hepatic_Lymphatic_heart_lung_spleen |
Association with transcript: | 0bp_to_ENST00000374963, ENST00000529941, ENST00000533054, ENST00000533337_5end |
EntrezGene: | ROBO4 |
HGNC: | 17985 |
UniProt: | F8W857B4DYV8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 7.19e-23 | 24 |
endothelial cell | 3.26e-22 | 36 |
blood vessel endothelial cell | 1.25e-17 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.25e-17 | 18 |
meso-epithelial cell | 1.45e-16 | 45 |
lining cell | 2.85e-10 | 58 |
barrier cell | 2.85e-10 | 58 |
endothelial cell of artery | 1.36e-09 | 9 |
aortic endothelial cell | 6.52e-07 | 6 |
vein endothelial cell | 7.23e-07 | 6 |
lymphangioblast | 8.64e-07 | 6 |
endothelial cell of lymphatic vessel | 8.64e-07 | 6 |
vascular lymphangioblast | 8.64e-07 | 6 |