FFCP PHASE1:Hg19::chr11:121461097..121461113,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6653 | |EntrezGene=6653 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11185 | |HGNC=11185 | ||
|TSSclassifier=strong | |||
|UniProt=E9PKB0 | |UniProt=E9PKB0 | ||
|association_with_transcript=-14bp_to_ENST00000527934,uc010rzq.1_5end | |||
|cluster_id=chr11:121461097..121461113,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_7_at_SORL1_5end | |||
|id=chr11:121461097..121461113,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.70e-69!42;CL:0000860!4.62e-64!45;CL:0002194!1.21e-51!63;CL:0000576!1.21e-51!63;CL:0000040!1.21e-51!63;CL:0000559!1.21e-51!63;CL:0002009!1.10e-49!65;CL:0000766!6.34e-48!76;CL:0000557!5.34e-47!71;CL:0002087!2.93e-46!119;CL:0000839!2.77e-45!70;CL:0000037!1.13e-44!172;CL:0000566!1.13e-44!172;CL:0000738!3.69e-42!140;CL:0000763!5.12e-42!112;CL:0000049!5.12e-42!112;CL:0000988!3.17e-41!182;CL:0002032!8.40e-41!165;CL:0000837!8.40e-41!165;CL:0002031!1.92e-38!124;CL:0000134!2.81e-12!358;CL:0002320!1.02e-11!365;CL:0000219!9.05e-10!390;CL:0000034!3.16e-08!444;CL:0000048!5.40e-08!430;CL:0000723!1.16e-07!436;CL:0000767!1.51e-07!3;CL:0000842!5.95e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.61e-114;33!CL:0002057;3.61e-114;33!CL:0000473;1.02e-78;39!CL:0000234;1.02e-78;39!CL:0000576;6.18e-56;48!CL:0000766;4.15e-32;69!CL:0002087;6.49e-21;104!CL:0000763;5.38e-18;100!CL:0000767;6.79e-14;3!CL:0000738;5.93e-13;136!CL:0000988;5.77e-08;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.34e-103,42;CL:0002057,1.34e-103,42;CL:0000473,8.41e-90,48;CL:0000234,8.41e-90,48;CL:0002194,1.77e-70,59;CL:0000576,1.77e-70,59;CL:0000040,1.77e-70,59;CL:0000559,1.77e-70,59;CL:0000766,1.24e-68,72;CL:0002009,5.53e-68,61;CL:0000557,1.50e-65,67;CL:0000839,2.12e-62,66;CL:0002087,8.58e-55,115;CL:0000738,3.12e-53,136;CL:0002031,2.30e-49,120;CL:0000763,2.08e-46,108;CL:0000049,2.08e-46,108;CL:0000037,5.48e-44,168;CL:0002032,7.57e-44,161;CL:0000837,7.57e-44,161;CL:0000988,2.27e-41,177;CL:0000134,8.90e-17,354;CL:0002320,2.70e-16,361;CL:0000219,1.34e-14,386;CL:0000767,7.44e-14,3;CL:0000048,1.59e-12,427;CL:0000723,3.08e-12,433;CL:0000034,7.24e-12,441 | |||
|ontology_enrichment_development_v019=CL:0002057;3.42e-76;42!CL:0000049;2.41e-15;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.87e-42!80;UBERON:0001474!1.29e-38!86;UBERON:0002390!9.40e-36!102;UBERON:0003061!9.40e-36!102;UBERON:0002193!7.16e-33!112;UBERON:0004765!5.09e-31!101;UBERON:0001434!5.09e-31!101;UBERON:0002405!4.60e-27!115;UBERON:0002204!5.45e-14!167;UBERON:0002384!5.82e-11!375;UBERON:0001049!1.23e-10!57;UBERON:0005068!1.23e-10!57;UBERON:0006241!1.23e-10!57;UBERON:0007135!1.23e-10!57;UBERON:0003081!3.04e-10!216;UBERON:0002616!4.16e-10!59;UBERON:0002780!2.22e-09!41;UBERON:0001890!2.22e-09!41;UBERON:0006240!2.22e-09!41;UBERON:0001893!4.51e-09!34;UBERON:0003080!4.53e-09!42;UBERON:0002020!5.50e-09!34;UBERON:0003528!5.50e-09!34;UBERON:0002298!3.24e-08!8;UBERON:0002791!4.49e-08!33;UBERON:0000955!9.37e-08!69;UBERON:0006238!9.37e-08!69;UBERON:0001950!2.01e-07!20;UBERON:0001869!3.90e-07!32 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.50e-57,76;UBERON:0001474,1.93e-52,82;UBERON:0004765,3.25e-47,90;UBERON:0002390,1.01e-45,98;UBERON:0003061,1.01e-45,98;UBERON:0002405,1.75e-45,93;UBERON:0001434,7.61e-42,100;UBERON:0002193,7.13e-41,108;UBERON:0002204,2.42e-22,167;UBERON:0003081,1.72e-18,203;UBERON:0002384,1.22e-15,371;UBERON:0000926,2.16e-09,315;UBERON:0004120,2.16e-09,315;UBERON:0006603,2.16e-09,315 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.19611159086069,6.15754420874593,6.76912719297642,2.36018566109342,1.15148819429164,4.64448369948228,0,0,0,0.0774672005803016,0.853015394924529,0.293600439334847,1.10799081706375,0.401088894940283,0.868043482863407,0,0,0,13.37663796772,19.2716731281293,23.5306539352182,7.43772918098191,6.57868620834921,9.60089749774821,5.75384784644301,13.3203567395132,13.0065226438722,55.5040545985956,27.7558413941045,20.3139729891513,13.5534484470675,16.3743690034707,16.4048143644912,143.247261629582,148.911068563307,144.490190430583,9.56568770541477,9.97318288108159,9.37694451171927,5.5139755339431,16.4541715160431,8.71951148593805,2.51248665256743,10.9511412868242,8.68755378820467,7.26479403160043,12.8897172595648,9.49387162322653,0.211255286311942,0,0.209658645508376,0.336985893439485,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0.263384084775077,0,0,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256686072559497,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.82707210449155,1.2942852049117,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383010740264733,0.211673582723883,0.324621940274555,0,0,0,0,0,0.481764225311099,0.201799707191048,0,0.343505344755765,0.921722292925374,0.671028323677248,0.166849141711909,0.390776190804081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,2.95403533106567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.539209063845416,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379864775735272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,3.83239764200917,0,2.62887354279315,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169346664131569,0,0,0,0,0,0,0,0.303747783290123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.39669780522807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.248385611765534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192687675289379,0,0,0.205116364240755,0,0.138314504928436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270150338473579,0,0.206686796501184,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,1.26757386311357,0,0.0679697329768317,0.263091094251396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0.203974470572744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.310298987585686,0,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,8.01421230758082 | ||
|short_description=p7@SORL1 | |||
}} | }} |
Latest revision as of 07:06, 16 September 2015
Short description: | p7@SORL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_SORL1_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -14bp_to_ENST00000527934, uc010rzq.1_5end |
EntrezGene: | SORL1 |
HGNC: | 11185 |
UniProt: | E9PKB0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.34e-103 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.34e-103 | 42 |
defensive cell | 8.41e-90 | 48 |
phagocyte | 8.41e-90 | 48 |
monopoietic cell | 1.77e-70 | 59 |
monocyte | 1.77e-70 | 59 |
monoblast | 1.77e-70 | 59 |
promonocyte | 1.77e-70 | 59 |
myeloid leukocyte | 1.24e-68 | 72 |
macrophage dendritic cell progenitor | 5.53e-68 | 61 |
granulocyte monocyte progenitor cell | 1.50e-65 | 67 |
myeloid lineage restricted progenitor cell | 2.12e-62 | 66 |
nongranular leukocyte | 8.58e-55 | 115 |
leukocyte | 3.12e-53 | 136 |
hematopoietic lineage restricted progenitor cell | 2.30e-49 | 120 |
myeloid cell | 2.08e-46 | 108 |
common myeloid progenitor | 2.08e-46 | 108 |
hematopoietic stem cell | 5.48e-44 | 168 |
hematopoietic oligopotent progenitor cell | 7.57e-44 | 161 |
hematopoietic multipotent progenitor cell | 7.57e-44 | 161 |
hematopoietic cell | 2.27e-41 | 177 |
mesenchymal cell | 8.90e-17 | 354 |
connective tissue cell | 2.70e-16 | 361 |
motile cell | 1.34e-14 | 386 |
basophil | 7.44e-14 | 3 |
multi fate stem cell | 1.59e-12 | 427 |
somatic stem cell | 3.08e-12 | 433 |
stem cell | 7.24e-12 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.50e-57 | 76 |
bone element | 1.93e-52 | 82 |
skeletal element | 3.25e-47 | 90 |
hematopoietic system | 1.01e-45 | 98 |
blood island | 1.01e-45 | 98 |
immune system | 1.75e-45 | 93 |
skeletal system | 7.61e-42 | 100 |
hemolymphoid system | 7.13e-41 | 108 |
musculoskeletal system | 2.42e-22 | 167 |
lateral plate mesoderm | 1.72e-18 | 203 |
connective tissue | 1.22e-15 | 371 |
mesoderm | 2.16e-09 | 315 |
mesoderm-derived structure | 2.16e-09 | 315 |
presumptive mesoderm | 2.16e-09 | 315 |