FFCP PHASE1:Hg19::chr11:118175596..118175612,+: Difference between revisions
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m (moved FFCP PHASE1 hg19::chr11:118175596..118175612,+ to FFCP PHASE1:Hg19::chr11:118175596..118175612,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=916 | |EntrezGene=916 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1674 | |HGNC=1674 | ||
|TSSclassifier=strong | |||
|UniProt=E9PSH8 | |UniProt=E9PSH8 | ||
|association_with_transcript=-1bp_to_ENST00000528600_5end | |||
|cluster_id=chr11:118175596..118175612,+ | |||
|coexpression_cluster_id=C1132 | |||
|description=CAGE_peak_3_at_CD3E_5end | |||
|id=chr11:118175596..118175612,+ | |||
|ontology_enrichment_celltype=CL:0000084!1.44e-28!25;CL:0000827!1.44e-28!25;CL:0000791!1.01e-27!18;CL:0000789!1.01e-27!18;CL:0002420!1.01e-27!18;CL:0002419!1.01e-27!18;CL:0000790!1.01e-27!18;CL:0000625!2.75e-17!11;CL:0000838!8.27e-17!52;CL:0000542!2.47e-16!53;CL:0000051!2.47e-16!53;CL:0000738!5.59e-16!140;CL:0002087!3.37e-15!119;CL:0002031!4.81e-12!124;CL:0000037!4.14e-11!172;CL:0000566!4.14e-11!172;CL:0000624!1.38e-10!6;CL:0000988!8.90e-10!182;CL:0002032!3.33e-09!165;CL:0000837!3.33e-09!165 | |||
|ontology_enrichment_celltype_v019=CL:0000084;2.18e-33;25!CL:0000791;8.12e-33;18!CL:0000789;8.12e-33;18!CL:0002419;8.12e-33;18!CL:0000625;1.76e-19;11!CL:0000624;1.54e-12;6!CL:0000623;3.54e-10;3!CL:0000542;4.52e-10;53!CL:0000226;9.79e-10;3!CL:0000842;9.79e-10;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,2.25e-33,25;CL:0000827,2.25e-33,25;CL:0000791,8.64e-33,18;CL:0000789,8.64e-33,18;CL:0002420,8.64e-33,18;CL:0002419,8.64e-33,18;CL:0000790,8.64e-33,18;CL:0000838,1.65e-19,52;CL:0000625,1.71e-19,11;CL:0000542,4.91e-19,53;CL:0000051,4.91e-19,53;CL:0000738,2.99e-14,136;CL:0002087,2.03e-13,115;CL:0000624,1.70e-12,6;CL:0000623,3.24e-10,3;CL:0000825,3.24e-10,3;CL:0000037,5.16e-10,168;CL:0000226,9.80e-10,3;CL:0000842,9.80e-10,3;CL:0002031,2.06e-09,120;CL:0000988,4.11e-09,177;CL:0002032,1.87e-07,161;CL:0000837,1.87e-07,161 | |||
|ontology_enrichment_development_v019=CL:0000790;8.12e-33;18!CL:0000051;4.52e-10;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.31e-19!115;UBERON:0000178!1.33e-12!15;UBERON:0000179!1.33e-12!15;UBERON:0000463!1.33e-12!15;UBERON:0004177!7.72e-09!7;UBERON:0002390!3.65e-08!102;UBERON:0003061!3.65e-08!102;UBERON:0002193!4.39e-08!112;UBERON:0002370!1.09e-07!4;UBERON:0005058!1.09e-07!4;UBERON:0009113!1.09e-07!4;UBERON:0003295!1.09e-07!4;UBERON:0005562!1.09e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.22e-21;15!UBERON:0000179;2.22e-21;15!UBERON:0000463;2.22e-21;15!UBERON:0002390;2.14e-15;32!UBERON:0002193;5.39e-11;42!UBERON:0004177;7.29e-10;5!UBERON:0005057;7.29e-10;5!UBERON:0002370;1.12e-07;2!UBERON:0005058;1.12e-07;2!UBERON:0009113;1.12e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.99e-21,15;UBERON:0000179,1.99e-21,15;UBERON:0000463,1.99e-21,15;UBERON:0004177,1.57e-10,7;UBERON:0005057,1.57e-10,7;UBERON:0002193,4.73e-08,108;UBERON:0002370,1.08e-07,4;UBERON:0005058,1.08e-07,4;UBERON:0009113,1.08e-07,4;UBERON:0003295,1.08e-07,4;UBERON:0005562,1.08e-07,4;UBERON:0002390,1.65e-07,98;UBERON:0003061,1.65e-07,98 | |||
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| ||
|short_description=p3@CD3E | |||
}} | }} |
Latest revision as of 23:44, 15 September 2015
Short description: | p3@CD3E |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CD3E_5end |
Coexpression cluster: | C1132_thymus_CD4_CD8_Natural_chronic_acute_Peripheral |
Association with transcript: | -1bp_to_ENST00000528600_5end |
EntrezGene: | CD3E |
HGNC: | 1674 |
UniProt: | E9PSH8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 2.25e-33 | 25 |
pro-T cell | 2.25e-33 | 25 |
mature alpha-beta T cell | 8.64e-33 | 18 |
alpha-beta T cell | 8.64e-33 | 18 |
immature T cell | 8.64e-33 | 18 |
mature T cell | 8.64e-33 | 18 |
immature alpha-beta T cell | 8.64e-33 | 18 |
lymphoid lineage restricted progenitor cell | 1.65e-19 | 52 |
CD8-positive, alpha-beta T cell | 1.71e-19 | 11 |
lymphocyte | 4.91e-19 | 53 |
common lymphoid progenitor | 4.91e-19 | 53 |
leukocyte | 2.99e-14 | 136 |
nongranular leukocyte | 2.03e-13 | 115 |
CD4-positive, alpha-beta T cell | 1.70e-12 | 6 |
natural killer cell | 3.24e-10 | 3 |
pro-NK cell | 3.24e-10 | 3 |
hematopoietic stem cell | 5.16e-10 | 168 |
single nucleate cell | 9.80e-10 | 3 |
mononuclear cell | 9.80e-10 | 3 |
hematopoietic lineage restricted progenitor cell | 2.06e-09 | 120 |
hematopoietic cell | 4.11e-09 | 177 |
hematopoietic oligopotent progenitor cell | 1.87e-07 | 161 |
hematopoietic multipotent progenitor cell | 1.87e-07 | 161 |
Ontology term | p-value | n |
---|---|---|
blood | 1.99e-21 | 15 |
haemolymphatic fluid | 1.99e-21 | 15 |
organism substance | 1.99e-21 | 15 |
hemopoietic organ | 1.57e-10 | 7 |
immune organ | 1.57e-10 | 7 |
hemolymphoid system | 4.73e-08 | 108 |
thymus | 1.08e-07 | 4 |
hemolymphoid system gland | 1.08e-07 | 4 |
thymic region | 1.08e-07 | 4 |
pharyngeal gland | 1.08e-07 | 4 |
thymus primordium | 1.08e-07 | 4 |
hematopoietic system | 1.65e-07 | 98 |
blood island | 1.65e-07 | 98 |