FFCP PHASE1:Hg19::chr11:114310081..114310082,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:114310081..114310082,+ to FFCP PHASE1:Hg19::chr11:114310081..114310082,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=25996 | |EntrezGene=25996 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17851 | |HGNC=17851 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y3B8,B2R532 | |UniProt=Q9Y3B8,B2R532 | ||
|association_with_transcript=-25bp_to_ENST00000265881,NM_015523,uc001poy.2,uc001poz.2_5end | |||
|cluster_id=chr11:114310081..114310082,+ | |||
|coexpression_cluster_id=C3084 | |||
|description=CAGE_peak_6_at_REXO2_5end | |||
|id=chr11:114310081..114310082,+ | |||
|ontology_enrichment_celltype=CL:0002321!7.71e-13!248;CL:0000220!1.74e-12!246;CL:0000066!1.46e-10!254;CL:0000548!1.95e-10!679;CL:0000004!1.95e-10!679;CL:0000255!1.95e-10!679;CL:0000012!5.54e-10!682;CL:0000222!8.70e-08!119;CL:0000144!2.01e-07!625;CL:0000055!2.13e-07!180 | |||
|ontology_enrichment_celltype_v019=CL:0002166;2.94e-11;3!CL:0002621;9.27e-10;3!CL:0002159;7.78e-08;14!CL:0000764;4.71e-07;2!CL:0000317;4.71e-07;2!CL:1000448;4.71e-07;2!CL:0002308;4.71e-07;2!CL:0002140;4.71e-07;2!CL:1000487;4.71e-07;2!CL:0000558;4.71e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002166,2.88e-11,3;CL:0002621,5.99e-10,3;CL:0002159,4.75e-08,14;CL:0000317,1.67e-07,2;CL:1000448,1.67e-07,2;CL:0002308,1.67e-07,2;CL:0002140,1.67e-07,2;CL:0000764,1.90e-07,2;CL:0000765,1.90e-07,2;CL:0000050,1.90e-07,2;CL:0000038,1.90e-07,2;CL:0000558,1.90e-07,2;CL:0000547,1.90e-07,2;CL:0000549,1.90e-07,2;CL:0000550,1.90e-07,2;CL:0000552,1.90e-07,2;CL:0002321,7.11e-07,250;CL:1000487,9.05e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003104!6.75e-07!238;UBERON:0009142!6.75e-07!238;UBERON:0004923!8.99e-07!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0010371;2.19e-14;31!UBERON:0001949;9.27e-10;3!UBERON:0001708;1.58e-08;4!UBERON:0008895;1.58e-08;4!UBERON:0000078;7.79e-08;2!UBERON:0002012;7.79e-08;2!UBERON:0008886;7.79e-08;2!UBERON:0002419;4.71e-07;2!UBERON:0007771;4.71e-07;2!UBERON:0003297;4.71e-07;2!UBERON:0001821;4.71e-07;2!UBERON:0003487;4.71e-07;2!UBERON:0001820;4.71e-07;2!UBERON:0011159;6.99e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010188,2.24e-14,6;UBERON:0002539,2.24e-14,6;UBERON:0008816,2.24e-14,6;UBERON:0001949,5.99e-10,3;UBERON:0001708,1.56e-08,4;UBERON:0008895,1.56e-08,4;UBERON:0000078,8.97e-08,2;UBERON:0007497,8.97e-08,2;UBERON:0003643,8.97e-08,2;UBERON:0003504,8.97e-08,2;UBERON:0003469,8.97e-08,2;UBERON:0003496,8.97e-08,2;UBERON:0002012,8.97e-08,2;UBERON:0008886,8.97e-08,2;UBERON:0007303,8.97e-08,2;UBERON:0002061,8.97e-08,2;UBERON:0005432,8.97e-08,2;UBERON:0004363,8.97e-08,2;UBERON:0002419,1.67e-07,2;UBERON:0007771,1.67e-07,2;UBERON:0003297,1.67e-07,2;UBERON:0001821,1.67e-07,2;UBERON:0003487,1.67e-07,2;UBERON:0001820,1.67e-07,2;UBERON:0005089,1.67e-07,2;UBERON:0005088,1.67e-07,2;UBERON:0011159,6.91e-07,5 | |||
|phase1_expression=0.726713517082227,0,1.12763523276777,0,0.893922188854576,0,0,0,0,0.491467873003018,0.697801167972428,2.40285509343189,0.791300934685361,0,0.662794751455832,0,0.602694528023977,0.730310090387373,0,0.492484232307152,0.204000691244253,0,0,0,0.376627918784408,0,0,0,0,0,0,0.919421224478927,0,0,0.154934401160603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,1.02290049474824,0,0.50133791063589,0.434539556882471,0.795285947051099,0.973269740605272,0.189069634328136,0.221729397462564,0.087834785693126,0.261958150995425,0,0.370784442784429,0,0,0,0,0,0,0.39752481473341,0,0,0,0.419499436209906,0.550236083880135,0.417989933073621,0,0.35576626268671,0.33472061276467,0.402829317109147,0,0,0,1.62028389576352,0.535798369704479,0.22452937262617,0.225222960966644,0,0,0.183201743930407,0,0,0,1.98788780678127,0.886413581652058,0.397227542439656,0.286836620748814,0.354668382198357,1.12135520028461,0,0,0.622422070799533,0.67355336034844,0.817309515567294,0,0,0,0,0.570471821544449,0,0.117434498643765,0.647491777472526,0.702254033511242,0,0.245668634623536,0,0,0.247266929278557,0.910161361938026,0,0,0.250237039743928,0,0,0,0.600952235626387,2.04177929688038,0,0.427114777637135,0.211931901159562,0.300091096084402,0,0,0.37223371266318,0,0.779496041289589,0,0,0.484938170456436,0,0.403008392910561,0.508681776931463,1.93260853163297,1.63647672354501,1.14721838155602,0.243947412259191,0.397589304964456,0.348581828608555,0.310983165046111,0.252320850875628,0.36497735907583,0,1.28648187638577,0,0,0,0.828147600278907,0.842923450390509,0.964044119533928,0.441175890929576,1.52515610864684,0.474541238222193,0.808987848960987,0.98110732562673,1.15424147083917,0,0,0,0,0,0,0,0,0.491953754172454,0.686271241194102,1.42675371031213,0,0.100528972411631,0.277765335475589,0.651616610620649,0,0,0,1.6437217193015,0.144366447761074,0,0.380508304469197,0,0,0,0,0,4.68669169933885,3.52762469217605,2.1266264586358,0.626909658919938,0.290633938513962,0,0,0.088048434013226,0,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0.285826432630578,0.112131084345361,0,0.1466765716419,1.16344544182,0,0,1.06375246633948,0,0,0,0,0.714889968290738,0.542621605391443,0,0.65147236858747,0.355391948742546,0.791951872933429,3.31583314765545,4.35766729300147,2.0994328148232,0,0,0,1.19812427745791,0,0,1.15825045334063,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0.623912584592421,0.892144943985809,0,0.117141414992713,0,0,0,0.664225598535437,0.553107505625109,0.173767228936166,0,0,0,0.215714200818617,0,0.909382714338778,0,0.604780586659361,1.24053903909388,0.153461973288062,0.841980283299221,1.15325234330131,2.04682899626681,0.804269605718038,0,0.308419387605311,0.355123450626254,0.410635780069046,0.519254429183621,0.464841513839837,0.241718899183244,2.20557117333613,0.276242966807689,1.95184561879831,0.364182336013434,0.786746489756545,0,0.0770153371044148,0.784349769176855,0,0.316654886678627,0,0.170093705276516,0.215915916102139,0,0.270946437543853,0,1.27438136522519,0.831076008928724,0.223874754722178,1.97333888981341,1.5686127061494,0,1.96808787419823,2.27764876265012,0.103041011647722,0,0,1.72279661398852,1.95018073810956,3.21367859688319,0,0.154048617114644,0.15350367472613,0,0.429680979473094,0,0.170453254832202,0.623224249527161,0.991709492165869,0.576570202095319,0.510450849978337,0.30347334256665,2.32422774648643,0.94443704049192,0,0,0.532306030317022,0,0.18532421910392,1.00187420719394,0,0,0.38126038784765,0,0.42793898803392,0,0.78494864019923,0.899362287916574,0,0.235624804691373,0.808729926293264,0,0.842516912477962,0,0.487426979262569,2.11300293513511,1.09199929126389,1.27264888758341,2.26016233240486,0,0.66343897524122,0,0.578775534266688,0.655894752046633,1.62328301570163,0.6196469961995,0.281695602532241,0.143411352204052,0.88424136911809,0.35667105148125,0,0.422215270595328,0,0.379473173765715,0.349934720244983,0.384888450902048,0,0,0.470719003883896,0.43050537267123,0,0,0,0,0,0,0,0,0,0.540031437238115,0,0,0,0.245040215981032,0,0,0.142283686696828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.69262196843137,0.540911356951966,0,0,0,0,0,0.111443384277478,0,0.95497793895076,1.18785872333055,0.307160702099232,0,0.140669416410513,0.111308705022906,0.659215496907038,0,0,0.276283915531148,0,0.409074730008619,0,0.311039587661807,1.3480252672099,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0.227586896570999,0,1.18193840883968,0,0,0.173624994933292,0,0,0,0.110579259931225,0,0,0.10893846351899,0,0.0769502585037971,0.227884111694002,0.46112780877612,0.179515288819544,0.760531603454056,0.31900115973192,0.641183153813036,0.533034776018635,0,0,0,0.225595660617181,0,0.167821586975843,0.189753732724185,0.476809736941136,0.210998064528027,0,0.565412285735763,0,0,0,0,0.296521128680622,0.123563938946503,0,0,0,0,0,0,0.242780379534093,0,0,0,0,0.450970258243478,0.207376382794494,0,0,0,0,0.569219092059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| ||
|short_description=p6@REXO2 | |||
}} | }} |
Latest revision as of 07:28, 25 September 2015
Short description: | p6@REXO2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_REXO2_5end |
Coexpression cluster: | C3084_Mallassezderived_Mesothelial_leiomyoma_granulosa_Sertoli_acute_Prostate |
Association with transcript: | -25bp_to_ENST00000265881, NM_015523, uc001poy.2, uc001poz.2_5end |
EntrezGene: | REXO2 |
HGNC: | 17851 |
UniProt: | Q9Y3B8B2R532 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of Malassez | 2.88e-11 | 3 |
gingival epithelial cell | 5.99e-10 | 3 |
general ecto-epithelial cell | 4.75e-08 | 14 |
sebum secreting cell | 1.67e-07 | 2 |
epithelial cell of sweat gland | 1.67e-07 | 2 |
epithelial cell of skin gland | 1.67e-07 | 2 |
acinar cell of sebaceous gland | 1.67e-07 | 2 |
erythroid lineage cell | 1.90e-07 | 2 |
erythroblast | 1.90e-07 | 2 |
megakaryocyte-erythroid progenitor cell | 1.90e-07 | 2 |
erythroid progenitor cell | 1.90e-07 | 2 |
reticulocyte | 1.90e-07 | 2 |
proerythroblast | 1.90e-07 | 2 |
basophilic erythroblast | 1.90e-07 | 2 |
polychromatophilic erythroblast | 1.90e-07 | 2 |
orthochromatic erythroblast | 1.90e-07 | 2 |
embryonic cell | 7.11e-07 | 250 |
smooth muscle cell of prostate | 9.05e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
protuberance | 2.24e-14 | 6 |
pharyngeal arch | 2.24e-14 | 6 |
embryonic head | 2.24e-14 | 6 |
gingival epithelium | 5.99e-10 | 3 |
jaw skeleton | 1.56e-08 | 4 |
splanchnocranium | 1.56e-08 | 4 |
mixed ectoderm/mesoderm/endoderm-derived structure | 8.97e-08 | 2 |
developing epithelial placode | 8.97e-08 | 2 |
respiratory system arterial blood vessel | 8.97e-08 | 2 |
respiratory system blood vessel | 8.97e-08 | 2 |
respiratory system artery | 8.97e-08 | 2 |
head blood vessel | 8.97e-08 | 2 |
pulmonary artery | 8.97e-08 | 2 |
pulmonary vascular system | 8.97e-08 | 2 |
pharyngeal vasculature | 8.97e-08 | 2 |
truncus arteriosus | 8.97e-08 | 2 |
aortic sac | 8.97e-08 | 2 |
pharyngeal arch artery | 8.97e-08 | 2 |
skin gland | 1.67e-07 | 2 |
epidermis gland | 1.67e-07 | 2 |
gland of integumental system | 1.67e-07 | 2 |
sebaceous gland | 1.67e-07 | 2 |
skin sebaceous gland | 1.67e-07 | 2 |
sweat gland | 1.67e-07 | 2 |
sweat gland placode | 1.67e-07 | 2 |
sebaceous gland placode | 1.67e-07 | 2 |
primary subdivision of cranial skeletal system | 6.91e-07 | 5 |