FFCP PHASE1:Hg19::chr10:90519724..90519748,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:90519724..90519748,+ to FFCP PHASE1:Hg19::chr10:90519724..90519748,+: NSchange) |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=643418 | |EntrezGene=643418 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=23452 | |HGNC=23452 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-203bp_to_ENST00000491766_5end | |||
|cluster_id=chr10:90519724..90519748,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_2_at_LIPN_5end | |||
|id=chr10:90519724..90519748,+ | |||
|ontology_enrichment_celltype=CL:0000738!1.79e-54!140;CL:0000037!1.24e-51!172;CL:0000566!1.24e-51!172;CL:0000766!4.13e-49!76;CL:0002032!1.37e-48!165;CL:0000837!1.37e-48!165;CL:0002057!3.57e-48!42;CL:0002087!2.53e-47!119;CL:0000860!4.34e-47!45;CL:0000988!1.08e-46!182;CL:0002031!1.43e-46!124;CL:0002009!7.80e-44!65;CL:0002194!8.22e-42!63;CL:0000576!8.22e-42!63;CL:0000040!8.22e-42!63;CL:0000559!8.22e-42!63;CL:0000557!1.64e-41!71;CL:0000763!3.21e-41!112;CL:0000049!3.21e-41!112;CL:0000839!4.21e-40!70;CL:0002393!6.72e-11!9;CL:0002397!6.72e-11!9;CL:0000094!3.58e-10!8;CL:0000134!5.64e-09!358;CL:0002320!2.81e-08!365;CL:0000838!5.43e-08!52;CL:0000542!1.07e-07!53;CL:0000051!1.07e-07!53;CL:0000081!9.53e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000860;7.31e-62;33!CL:0002057;7.31e-62;33!CL:0000576;1.01e-47;48!CL:0000473;5.13e-47;39!CL:0000234;5.13e-47;39!CL:0000766;1.18e-36;69!CL:0000763;2.67e-18;100!CL:0000094;4.95e-17;8!CL:0002087;1.00e-15;104!CL:0002393;1.08e-12;6!CL:0002397;1.08e-12;6!CL:0000738;3.67e-12;136!CL:0000081;6.50e-12;11!CL:0000988;4.17e-09;177!CL:0000775;7.42e-08;3!CL:0000875;2.47e-07;3!CL:0002396;2.47e-07;3!CL:0000767;8.83e-07;3!CL:0000226;9.97e-07;3!CL:0000842;9.97e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,8.64e-86,42;CL:0002057,8.64e-86,42;CL:0000473,3.11e-80,48;CL:0000234,3.11e-80,48;CL:0000766,1.18e-78,72;CL:0002009,1.75e-70,61;CL:0002194,7.13e-67,59;CL:0000576,7.13e-67,59;CL:0000040,7.13e-67,59;CL:0000559,7.13e-67,59;CL:0000557,1.40e-65,67;CL:0000839,6.26e-61,66;CL:0000763,2.29e-59,108;CL:0000049,2.29e-59,108;CL:0000738,5.63e-58,136;CL:0000037,1.55e-49,168;CL:0002032,2.49e-47,161;CL:0000837,2.49e-47,161;CL:0002087,3.37e-47,115;CL:0000988,5.15e-46,177;CL:0002031,1.85e-44,120;CL:0002393,2.43e-18,9;CL:0002397,2.43e-18,9;CL:0000094,4.91e-17,8;CL:0000134,2.16e-13,354;CL:0002320,8.89e-13,361;CL:0000081,6.46e-12,11;CL:0000219,1.24e-10,386;CL:0000034,3.48e-08,441;CL:0000723,3.65e-08,433;CL:0000048,4.57e-08,427;CL:0000775,7.34e-08,3;CL:0000875,2.42e-07,3;CL:0002396,2.42e-07,3;CL:0000767,8.75e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;4.86e-61;42!CL:0000049;1.74e-17;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.01e-48!102;UBERON:0003061!1.01e-48!102;UBERON:0002193!1.78e-44!112;UBERON:0002371!5.37e-37!80;UBERON:0001474!7.38e-33!86;UBERON:0002405!3.76e-28!115;UBERON:0004765!9.63e-26!101;UBERON:0001434!9.63e-26!101;UBERON:0003081!6.52e-13!216;UBERON:0000178!2.42e-09!15;UBERON:0000179!2.42e-09!15;UBERON:0000463!2.42e-09!15;UBERON:0002204!6.61e-09!167;UBERON:0002384!1.09e-07!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.29e-16;15!UBERON:0000179;1.29e-16;15!UBERON:0000463;1.29e-16;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.78e-66,98;UBERON:0003061,2.78e-66,98;UBERON:0002193,1.53e-58,108;UBERON:0002371,4.13e-56,76;UBERON:0001474,6.05e-51,82;UBERON:0004765,3.98e-45,90;UBERON:0002405,3.35e-43,93;UBERON:0001434,3.67e-39,100;UBERON:0003081,4.20e-23,203;UBERON:0002204,8.76e-18,167;UBERON:0000178,1.32e-16,15;UBERON:0000179,1.32e-16,15;UBERON:0000463,1.32e-16,15;UBERON:0002384,6.08e-12,371;UBERON:0000926,8.55e-10,315;UBERON:0004120,8.55e-10,315;UBERON:0006603,8.55e-10,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,12.5876568591649,6.90892916574983,6.03782880932696,0,0,0.369754010166788,3.95082722959538,0.568676929949686,0.587200878669695,13.8498852132969,10.0272223735071,10.199510923645,0,0,0,18.1747798474456,10.2026504795979,12.1292030593908,37.1886459049095,26.7259127214187,43.0491855544194,34.8107794709802,25.1037492398519,31.2156543452932,169.27012924168,105.859488107747,127.300897398681,45.3664038297677,33.0216441569993,39.3266097778898,135.289080427939,120.669314180611,136.818144920995,14.5134572082155,10.7710375115681,9.80316926225197,73.1327281344032,38.5821952789975,50.4486021686416,41.4560297673626,51.1053260051797,46.2612239221898,69.015543300204,71.4458613815875,80.0649840225438,32.533314092039,20.4100127966442,23.6914269424465,21.9040830735665,16.5194582125657,21.2157774440146,25.3661341929711,18.4992509795154,28.8609362948122,0,1.63841583378639,0.889509253863555,1.70692089026603,0.800791974072025,0.574752439954483,1.32208974556972,0,0.569212969109448,0,0.382273228125229,0,3.92355994087075,0.526768169550154,0.196709770113833,0.393010762749165,0.205601498999509,6.52027332023645,1.95553359980154,0.473447805734733,3.89653456815823,2.33961959458865,1.47302953737419,0.221533894583621,2.70803863765016,1.28091319725675,1.95089021339817,0.493313713811028,0,1.73881851441031,0.296573126324121,0.267540828089713,0,0.339928028092699,0,0,0,0.637130828648193,0,0,1.80690142893327,0.383959833463255,1.24930726552346,0.473554504088034,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.0654895377488563,0,0,0,0,0,1.43094374583205,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,122.555788215539,31.022421131866,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.545492241181669,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,1.1240175325762,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0.594524649154913,0,0,0.283550194484773,0,0,0,1.47798971368783,0.352193736052904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.845302752556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0.502257091432126,2.10833939483032,0,0,0,0,0,0,0.112085143993527,0.591092280605782,0,0.256686072559497,0,0,0,0,0,40.4463792931478,50.8574480646842,76.2524544722305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.09779314940704,8.84428223356329,4.69601254335155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,0.753150406214233,0,0,0.443430153536676,0,6.08937131078603,3.82318603571188,7.97506062043828,7.38518503919146,11.5181436464134,4.53931317834902,5.40031437238115,1.58625035258854,0,0,0,0,0,0,0,0.798317485731266,0.191505370132367,0,1.29848776109822,0.561594356226918,0,2.0368386450493,0,0,0,0,0.851692475380653,2.06103206853459,0.921722292925374,0.447352215784832,1.16794399198336,2.34465714482448,0,0,0,0.33307196799782,0,0,0.439524537815682,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0.19924798825107,0,0,0,8.98519079865807,0,0,0,0,0.887790650732402,7.18449277040819,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81250867562184,0,0.113942055847001,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0.182454789215666,0,0,0,1.20990716048664,0,0.31593289814244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0730893170861856,0.0821154570532092,0.290967049465258,0,0,0,0,0,0,0,0.213452994739353,0.19980960958213,0,0,0,0,0,0.235694034616795,0,0,0,0,0.600420288709789,0,0,0,0,0,0.229160424011684,0,0.399358000997982,0,0.446342914883745,0.201550417460179,0,0,0,0,0,0,0,0,0,0,0,0,22.2724152635985,4.6428117273477,0,1.0063040627978,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0.146552233678082,0,0.258565912723101,0.13223260174269,0,0,1.9221734262185,1.10043013569766,0.828478110694391,0.992332043623902,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0.106691729694141,0.172214979660816,0,0,2.65771064666944,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196295437002051,0,0,0,0,0,0,0,0,0,0.261906694481422,0,0,0.0675375846183947,0,0,0,0,0,0.992422356778588,0,0,0,0,0,0,0.0887023701626388,0.230467975111559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0.6828739083758,4.83881763269864,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,2.4285549652957,0,0,0,0,0,0,0.0771741581079447,0.218559560503957,0,0,0,1.37415926980462,0,0,0,0.751871343838829,0.386747327841463,0.0999411559249289,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0.426467963801962,0,0.322944549180031,0.372448285775147,0,0,0,1.74173398317569,0.342233301085281,0.336760265072938,1.00411087549747,0.332660356546013,0,0,0,0,0,0.122241444182866,0,0,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,12.5876568591649,6.90892916574983,6.03782880932696,0,0,0.369754010166788,3.95082722959538,0.568676929949686,0.587200878669695,13.8498852132969,10.0272223735071,10.199510923645,0,0,0,18.1747798474456,10.2026504795979,12.1292030593908,37.1886459049095,26.7259127214187,43.0491855544194,34.8107794709802,25.1037492398519,31.2156543452932,169.27012924168,105.859488107747,127.300897398681,45.3664038297677,33.0216441569993,39.3266097778898,135.289080427939,120.669314180611,136.818144920995,14.5134572082155,10.7710375115681,9.80316926225197,73.1327281344032,38.5821952789975,50.4486021686416,41.4560297673626,51.1053260051797,46.2612239221898,69.015543300204,71.4458613815875,80.0649840225438,32.533314092039,20.4100127966442,23.6914269424465,21.9040830735665,16.5194582125657,21.2157774440146,25.3661341929711,18.4992509795154,28.8609362948122,0,1.63841583378639,0.889509253863555,1.70692089026603,0.800791974072025,0.574752439954483,1.32208974556972,0,0.569212969109448,0,0.382273228125229,0,3.92355994087075,0.526768169550154,0.196709770113833,0.393010762749165,0.205601498999509,6.52027332023645,1.95553359980154,0.473447805734733,3.89653456815823,2.33961959458865,1.47302953737419,0.221533894583621,2.70803863765016,1.28091319725675,1.95089021339817,0.493313713811028,0,1.73881851441031,0.296573126324121,0.267540828089713,0,0.339928028092699,0,0,0,0.637130828648193,0,0,1.80690142893327,0.383959833463255,1.24930726552346,0.473554504088034,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.0654895377488563,0,0,0,0,0,1.43094374583205,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,122.555788215539,31.022421131866,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.545492241181669,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,1.1240175325762,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0.594524649154913,0,0,0.283550194484773,0,0,0,1.47798971368783,0.352193736052904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.845302752556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0.502257091432126,2.10833939483032,0,0,0,0,0,0,0.112085143993527,0.591092280605782,0,0.256686072559497,0,0,0,0,0,40.4463792931478,50.8574480646842,76.2524544722305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.09779314940704,8.84428223356329,4.69601254335155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,0.753150406214233,0,0,0.443430153536676,0,6.08937131078603,3.82318603571188,7.97506062043828,7.38518503919146,11.5181436464134,4.53931317834902,5.40031437238115,1.58625035258854,0,0,0,0,0,0,0,0.798317485731266,0.191505370132367,0,1.29848776109822,0.561594356226918,0,2.0368386450493,0,0,0,0,0.851692475380653,2.06103206853459,0.921722292925374,0.447352215784832,1.16794399198336,2.34465714482448,0,0,0,0.33307196799782,0,0,0.439524537815682,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0.19924798825107,0,0,0,8.98519079865807,0,0,0,0,0.887790650732402,7.18449277040819,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81250867562184,0,0.113942055847001,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0.182454789215666,0,0,0,1.20990716048664,0,0.31593289814244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0730893170861856,0.0821154570532092,0.290967049465258,0,0,0,0,0,0,0,0.213452994739353,0.19980960958213,0,0,0,0,0,0.235694034616795,0,0,0,0,0.600420288709789,0,0,0,0,0,0.229160424011684,0,0.399358000997982,0,0.446342914883745,0.201550417460179,0,0,0,0,0,0,0,0,0,0,0,0,22.2724152635985,4.6428117273477,0,1.0063040627978,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0.146552233678082,0,0.258565912723101,0.13223260174269,0,0,1.9221734262185,1.10043013569766,0.828478110694391,0.992332043623902,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0.106691729694141,0.172214979660816,0,0,2.65771064666944,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196295437002051,0,0,0,0,0,0,0,0,0,0.261906694481422,0,0,0.0675375846183947,0,0,0,0,0,0.992422356778588,0,0,0,0,0,0,0.0887023701626388,0.230467975111559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0.6828739083758,4.83881763269864,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,2.4285549652957,0,0,0,0,0,0,0.0771741581079447,0.218559560503957,0,0,0,1.37415926980462,0,0,0,0.751871343838829,0.386747327841463,0.0999411559249289,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0.426467963801962,0,0.322944549180031,0.372448285775147,0,0,0,1.74173398317569,0.342233301085281,0.336760265072938,1.00411087549747,0.332660356546013,0,0,0,0,0,0.122241444182866,0,0,0.201273793591026,0 | ||
|short_description=p2@LIPN | |||
}} | }} |
Latest revision as of 19:50, 19 September 2015
Short description: | p2@LIPN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LIPN_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -203bp_to_ENST00000491766_5end |
EntrezGene: | LIPN |
HGNC: | 23452 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.78e-66 | 98 |
blood island | 2.78e-66 | 98 |
hemolymphoid system | 1.53e-58 | 108 |
bone marrow | 4.13e-56 | 76 |
bone element | 6.05e-51 | 82 |
skeletal element | 3.98e-45 | 90 |
immune system | 3.35e-43 | 93 |
skeletal system | 3.67e-39 | 100 |
lateral plate mesoderm | 4.20e-23 | 203 |
musculoskeletal system | 8.76e-18 | 167 |
blood | 1.32e-16 | 15 |
haemolymphatic fluid | 1.32e-16 | 15 |
organism substance | 1.32e-16 | 15 |
connective tissue | 6.08e-12 | 371 |
mesoderm | 8.55e-10 | 315 |
mesoderm-derived structure | 8.55e-10 | 315 |
presumptive mesoderm | 8.55e-10 | 315 |