FFCP PHASE1:Hg19::chr10:76995675..76995688,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:76995675..76995688,- to FFCP PHASE1:Hg19::chr10:76995675..76995688,-: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=118881 | |EntrezGene=118881 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26309 | |HGNC=26309 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000469299_5end | |||
|cluster_id=chr10:76995675..76995688,- | |||
|description=CAGE_peak_3_at_COMTD1_5end | |||
|id=chr10:76995675..76995688,- | |||
|ontology_enrichment_celltype=CL:0000066!2.35e-24!254;CL:0000223!3.01e-12!59;CL:0002076!1.26e-11!43;CL:0002251!5.86e-08!21 | |||
|ontology_enrichment_celltype_v019=CL:0002076;2.13e-10;42!CL:0002251;5.81e-09;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.12e-20,253;CL:0002076,2.76e-13,42;CL:0000223,2.40e-12,58;CL:0002251,6.22e-09,20 | |||
|ontology_enrichment_development_v019=UBERON:0008947;9.51e-08;29!CL:0000223;3.86e-07;58 | |||
|ontology_enrichment_disease=DOID:305!8.21e-16!106;DOID:0050687!1.30e-11!143;DOID:14566!3.85e-08!239;DOID:162!5.41e-08!235 | |||
|ontology_enrichment_disease_v019=DOID:4362;3.87e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:305,4.04e-13,106;DOID:0050687,2.35e-09,143 | |||
|ontology_enrichment_uberon=UBERON:0004119!4.07e-18!169;UBERON:0000925!4.07e-18!169;UBERON:0006595!4.07e-18!169;UBERON:0001007!1.81e-15!155;UBERON:0001555!1.81e-15!155;UBERON:0007026!1.81e-15!155;UBERON:0004921!6.73e-15!129;UBERON:0004185!6.73e-15!129;UBERON:0001004!2.20e-14!72;UBERON:0000077!2.50e-14!130;UBERON:0001041!4.82e-13!98;UBERON:0000481!6.65e-12!347;UBERON:0003104!2.30e-11!238;UBERON:0009142!2.30e-11!238;UBERON:0000072!3.52e-10!46;UBERON:0000065!6.38e-10!53;UBERON:0005177!7.60e-09!107;UBERON:0008947!1.37e-08!38;UBERON:0003258!1.37e-08!38;UBERON:0000064!2.92e-08!219;UBERON:0000161!5.33e-08!35;UBERON:0006554!6.52e-08!44;UBERON:0000466!1.38e-07!126;UBERON:0001048!1.70e-07!168;UBERON:0001008!2.31e-07!45;UBERON:0000062!2.65e-07!511;UBERON:0000464!3.32e-07!104;UBERON:0003103!3.82e-07!69;UBERON:0005911!4.05e-07!82;UBERON:0005153!6.84e-07!37;UBERON:0000166!7.20e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0000072;1.63e-08;37!UBERON:0001737;2.71e-08;9!UBERON:0001557;2.71e-08;9!UBERON:0001041;2.82e-08;14!UBERON:0001044;5.57e-08;6!UBERON:0003293;5.57e-08;6!UBERON:0003294;5.57e-08;6!UBERON:0010047;5.57e-08;6!UBERON:0003408;5.57e-08;6!UBERON:0000167;5.57e-08;6!UBERON:0001004;9.34e-08;65!UBERON:0004807;2.09e-07;22!UBERON:0005911;4.54e-07;36!UBERON:0000065;6.16e-07;44!UBERON:0000161;8.79e-07;19!UBERON:0000166;8.79e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004921,6.74e-16,118;UBERON:0004119,8.64e-15,160;UBERON:0000925,8.64e-15,160;UBERON:0006595,8.64e-15,160;UBERON:0001041,2.32e-14,87;UBERON:0001004,1.08e-13,74;UBERON:0001007,2.79e-13,145;UBERON:0001555,2.79e-13,145;UBERON:0007026,2.79e-13,145;UBERON:0000072,2.94e-09,47;UBERON:0008947,5.33e-09,38;UBERON:0003258,5.33e-09,38;UBERON:0000065,5.50e-09,54;UBERON:0001737,1.21e-08,9;UBERON:0000161,3.53e-08,36;UBERON:0000166,3.70e-08,22;UBERON:0001044,1.09e-07,6;UBERON:0003293,1.09e-07,6;UBERON:0003294,1.09e-07,6;UBERON:0010047,1.09e-07,6;UBERON:0000167,1.09e-07,6;UBERON:0001048,2.34e-07,160;UBERON:0005157,3.61e-07,47;UBERON:0006554,5.47e-07,47;UBERON:0005177,6.40e-07,101;UBERON:0001557,9.81e-07,19;UBERON:0001008,9.88e-07,48 | |||
|phase1_expression=0.181678379270557,0.428201047781966,0.140954404095971,0,0,0,0,0,0.261185628199839,0.737201809504527,6.28021051175185,0.218441372130172,0.527533956456907,0.247532705920093,0.331397375727916,0,0,0,0.487932798790507,0.246242116153576,0.408001382488506,1.25381888591235,0.85870796139317,0.273748850145768,0.502170558379211,0.458480434487708,0.246301768349837,0.157421562627358,0,0,0.309632246632152,4.59710612239464,1.204823675113,1.84877005083394,2.16908161624845,1.27952309238679,0,0,0.200544447470142,0.217010870715852,0,0,0,0.145398238779565,0.755751887377619,0.242584061187816,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0.224723484445085,0,0,0,0.329851300186716,0.199463657621632,0,0.290209238628584,0,0,0,0,0.217188844705117,1.21079900526674,0,0,0,0,0,0,0.150176892841506,0,0.285012743741249,0.39783335439818,0.182664153764634,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0.167186495390678,0.32592226663359,0.473447805734733,0,0.334231370655521,0,0,0.270803863765016,1.0247305578054,0.650296737799391,0.328875809207352,0.276350017785848,0,0.14828656316206,0.535081656179426,0,0.453237370790265,0.383220493601921,0.68725489096526,0.506039384039006,0.95569624297229,0,0,0.150575119077773,0.127986611154418,1.24930726552346,0.947109008176067,0,0,0,0,0,0,0.255725123687061,0,1.00267582127178,0.289693037921647,0,0,0.189069634328136,0,0.614843499851882,0.130979075497713,2.18577172975525,2.96627554227544,0,0.522389211897802,0.26591592103773,0,0,0,0.198762407366705,0,0.347140501607594,0,0,0,0.208994966536811,0.258416759169329,0,0,0.402829317109147,0.760272105718513,0.976248230192678,0.367663080345869,0,0.0892997282840798,0,0.225222960966644,0,0,0.183201743930407,0,0,1.74437620857014,0,0.25326102332916,0.397227542439656,0.860509862246441,0,0,1.06748995729705,1.2333377420858,0.311211035399766,0.404132016209064,0.653847612453835,0.151357427644931,0,0.234321431833797,0,0,0,0.352303495931295,0.485618833104395,0.702254033511242,0.408308342509787,0.491337269247072,0.206651562351531,0,0.741800787835671,0,0,0.336672227908132,0.250237039743928,0,0,0.30648779579902,0.901428353439581,0.794025282120147,0,0.213557388818567,0,0.300091096084402,0,0.772921620136887,0.18611685633159,0.337552664482532,0.0974370051611986,0.504867548488229,0.0920498986422993,0,0.355009592516614,0,0.339121184620975,1.73934767846967,2.72746120590835,0.860413786167011,0.487894824518382,0.397589304964456,0.69716365721711,0.518305275076852,0.756962552626885,0,1.56449532329816,0.643240938192885,0,0,1.44375896333917,1.53798840051797,1.68584690078102,2.16909926895134,1.21323370005633,1.96091499683166,0.949082476444386,1.34831308160164,2.35465758150415,2.30848294167834,0,1.40241773803446,1.2347220339942,0,3.80265104465493,0.982827216677626,1.77236972004421,0,2.21379189377604,0,1.42675371031213,1.1240175325762,0.301586917234893,0.648119116109707,0.651616610620649,0,0,0.115930404975077,0.117408694235822,0.288732895522148,0.925971025153221,0.570762456703795,0,0.858486162094873,0,0,0.148631162288728,0.93733833986777,0.335964256397719,0.850650583454319,0.806026704325635,0.871901815541886,1.15014803749563,0,0,0,0,0.12624243342638,0,0,0,1.71072446022705,0.102827492703324,0,0,0.112131084345361,0,0.22001485746285,0.129271715757778,0,0,0.26593811658487,0,0.514414748524284,0,0.266422179016099,0,0,0,0.977208552881205,0,0,0.602878754119172,0,0.499864955910285,0,0.502257091432126,0,0.718874566474748,0,1.42636905040718,0,0,0.179060963239896,0.672510863961164,0,0,0.256686072559497,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0.36807447515742,0,0.271265023699736,0.415941723061614,0.713715955188647,0.788512075169673,0.585707074963566,0,0,2.0694614258501,0,0,0.347534457872331,0.587403472388222,0.343143423810856,0,0.647142602455851,0.426910231213777,1.81876542867756,1.66435439510497,1.5119514666484,0,0.153461973288062,0,0,0,0.160853921143607,1.48418066444991,0.154209693802656,0.177561725313127,0.410635780069046,0.519254429183621,0.232420756919918,1.57117284469109,1.40354529212299,2.3941057123333,0.574072240823034,0.182091168006717,0.786746489756545,0.902399225814824,0.770153371044148,3.13739907670742,1.46139224653261,0.73886140225013,1.13733384070897,0.680374821106063,0.647747748306418,1.54227252690289,0,3.01013864312912,1.01950509218015,0,0.895499018888713,0.438519753291869,0,1.28225062558195,1.96808787419823,0.976135183992909,0.618246069886334,0.457847324091717,0.330037999682352,0.574265537996172,1.30012049207304,0,0.193341436584244,0.308097234229289,0.614014698904518,0.275673144969061,0,0.145016693914229,0.255679882248303,0.178064071293475,0.661139661443912,0.576570202095319,2.04180339991335,1.4162089319777,0.929691098594572,0.62962469366128,0,0,0,1.73986598415015,0.18532421910392,0.286249773483982,1.116475108079,0.316379424718726,0.190630193923825,0.255897791311334,0,0.636406495851874,0.78494864019923,0,0.274537029736055,0.589062011728432,0.404364963146632,1.58510321173008,0,0.975267478179181,0,0,0.272999822815972,0.707027159768564,0,0,1.99031692572366,0,0.5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|phase1_expression=0.181678379270557,0.428201047781966,0.140954404095971,0,0,0,0,0,0.261185628199839,0.737201809504527,6.28021051175185,0.218441372130172,0.527533956456907,0.247532705920093,0.331397375727916,0,0,0,0.487932798790507,0.246242116153576,0.408001382488506,1.25381888591235,0.85870796139317,0.273748850145768,0.502170558379211,0.458480434487708,0.246301768349837,0.157421562627358,0,0,0.309632246632152,4.59710612239464,1.204823675113,1.84877005083394,2.16908161624845,1.27952309238679,0,0,0.200544447470142,0.217010870715852,0,0,0,0.145398238779565,0.755751887377619,0.242584061187816,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0.224723484445085,0,0,0,0.329851300186716,0.199463657621632,0,0.290209238628584,0,0,0,0,0.217188844705117,1.21079900526674,0,0,0,0,0,0,0.150176892841506,0,0.285012743741249,0.39783335439818,0.182664153764634,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0.167186495390678,0.32592226663359,0.473447805734733,0,0.334231370655521,0,0,0.270803863765016,1.0247305578054,0.650296737799391,0.328875809207352,0.276350017785848,0,0.14828656316206,0.535081656179426,0,0.453237370790265,0.383220493601921,0.68725489096526,0.506039384039006,0.95569624297229,0,0,0.150575119077773,0.127986611154418,1.24930726552346,0.947109008176067,0,0,0,0,0,0,0.255725123687061,0,1.00267582127178,0.289693037921647,0,0,0.189069634328136,0,0.614843499851882,0.130979075497713,2.18577172975525,2.96627554227544,0,0.522389211897802,0.26591592103773,0,0,0,0.198762407366705,0,0.347140501607594,0,0,0,0.208994966536811,0.258416759169329,0,0,0.402829317109147,0.760272105718513,0.976248230192678,0.367663080345869,0,0.0892997282840798,0,0.225222960966644,0,0,0.183201743930407,0,0,1.74437620857014,0,0.25326102332916,0.397227542439656,0.860509862246441,0,0,1.06748995729705,1.2333377420858,0.311211035399766,0.404132016209064,0.653847612453835,0.151357427644931,0,0.234321431833797,0,0,0,0.352303495931295,0.485618833104395,0.702254033511242,0.408308342509787,0.491337269247072,0.206651562351531,0,0.741800787835671,0,0,0.336672227908132,0.250237039743928,0,0,0.30648779579902,0.901428353439581,0.794025282120147,0,0.213557388818567,0,0.300091096084402,0,0.772921620136887,0.18611685633159,0.337552664482532,0.0974370051611986,0.504867548488229,0.0920498986422993,0,0.355009592516614,0,0.339121184620975,1.73934767846967,2.72746120590835,0.860413786167011,0.487894824518382,0.397589304964456,0.69716365721711,0.518305275076852,0.756962552626885,0,1.56449532329816,0.643240938192885,0,0,1.44375896333917,1.53798840051797,1.68584690078102,2.16909926895134,1.21323370005633,1.96091499683166,0.949082476444386,1.34831308160164,2.35465758150415,2.30848294167834,0,1.40241773803446,1.2347220339942,0,3.80265104465493,0.982827216677626,1.77236972004421,0,2.21379189377604,0,1.42675371031213,1.1240175325762,0.301586917234893,0.648119116109707,0.651616610620649,0,0,0.115930404975077,0.117408694235822,0.288732895522148,0.925971025153221,0.570762456703795,0,0.858486162094873,0,0,0.148631162288728,0.93733833986777,0.335964256397719,0.850650583454319,0.806026704325635,0.871901815541886,1.15014803749563,0,0,0,0,0.12624243342638,0,0,0,1.71072446022705,0.102827492703324,0,0,0.112131084345361,0,0.22001485746285,0.129271715757778,0,0,0.26593811658487,0,0.514414748524284,0,0.266422179016099,0,0,0,0.977208552881205,0,0,0.602878754119172,0,0.499864955910285,0,0.502257091432126,0,0.718874566474748,0,1.42636905040718,0,0,0.179060963239896,0.672510863961164,0,0,0.256686072559497,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0.36807447515742,0,0.271265023699736,0.415941723061614,0.713715955188647,0.788512075169673,0.585707074963566,0,0,2.0694614258501,0,0,0.347534457872331,0.587403472388222,0.343143423810856,0,0.647142602455851,0.426910231213777,1.81876542867756,1.66435439510497,1.5119514666484,0,0.153461973288062,0,0,0,0.160853921143607,1.48418066444991,0.154209693802656,0.177561725313127,0.410635780069046,0.519254429183621,0.232420756919918,1.57117284469109,1.40354529212299,2.3941057123333,0.574072240823034,0.182091168006717,0.786746489756545,0.902399225814824,0.770153371044148,3.13739907670742,1.46139224653261,0.73886140225013,1.13733384070897,0.680374821106063,0.647747748306418,1.54227252690289,0,3.01013864312912,1.01950509218015,0,0.895499018888713,0.438519753291869,0,1.28225062558195,1.96808787419823,0.976135183992909,0.618246069886334,0.457847324091717,0.330037999682352,0.574265537996172,1.30012049207304,0,0.193341436584244,0.308097234229289,0.614014698904518,0.275673144969061,0,0.145016693914229,0.255679882248303,0.178064071293475,0.661139661443912,0.576570202095319,2.04180339991335,1.4162089319777,0.929691098594572,0.62962469366128,0,0,0,1.73986598415015,0.18532421910392,0.286249773483982,1.116475108079,0.316379424718726,0.190630193923825,0.255897791311334,0,0.636406495851874,0.78494864019923,0,0.274537029736055,0.589062011728432,0.404364963146632,1.58510321173008,0,0.975267478179181,0,0,0.272999822815972,0.707027159768564,0,0,1.99031692572366,0,0.5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| ||
|short_description=p3@COMTD1 | |||
}} | }} |
Latest revision as of 09:09, 19 September 2015
Short description: | p3@COMTD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_COMTD1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000469299_5end |
EntrezGene: | COMTD1 |
HGNC: | 26309 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.12e-20 | 253 |
endo-epithelial cell | 2.76e-13 | 42 |
endodermal cell | 2.40e-12 | 58 |
epithelial cell of alimentary canal | 6.22e-09 | 20 |
Ontology term | p-value | n |
---|---|---|
subdivision of digestive tract | 6.74e-16 | 118 |
endoderm-derived structure | 8.64e-15 | 160 |
endoderm | 8.64e-15 | 160 |
presumptive endoderm | 8.64e-15 | 160 |
foregut | 2.32e-14 | 87 |
respiratory system | 1.08e-13 | 74 |
digestive system | 2.79e-13 | 145 |
digestive tract | 2.79e-13 | 145 |
primitive gut | 2.79e-13 | 145 |
segment of respiratory tract | 2.94e-09 | 47 |
respiratory primordium | 5.33e-09 | 38 |
endoderm of foregut | 5.33e-09 | 38 |
respiratory tract | 5.50e-09 | 54 |
larynx | 1.21e-08 | 9 |
orifice | 3.53e-08 | 36 |
oral opening | 3.70e-08 | 22 |
saliva-secreting gland | 1.09e-07 | 6 |
gland of oral region | 1.09e-07 | 6 |
gland of foregut | 1.09e-07 | 6 |
oral gland | 1.09e-07 | 6 |
oral cavity | 1.09e-07 | 6 |
primordium | 2.34e-07 | 160 |
epithelial fold | 3.61e-07 | 47 |
urinary system structure | 5.47e-07 | 47 |
trunk region element | 6.40e-07 | 101 |
upper respiratory tract | 9.81e-07 | 19 |
renal system | 9.88e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 4.04e-13 | 106 |
cell type cancer | 2.35e-09 | 143 |