FFCP PHASE1:Hg19::chr10:52750632..52750698,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:52750632..52750698,+ to FFCP PHASE1:Hg19::chr10:52750632..52750698,+: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5592 | |EntrezGene=5592 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9414 | |HGNC=9414 | ||
|TSSclassifier=strong | |||
|UniProt=Q13976 | |UniProt=Q13976 | ||
|association_with_transcript=-212bp_to_NM_001098512_5end | |||
|cluster_id=chr10:52750632..52750698,+ | |||
|description=CAGE_peak_2_at_PRKG1_5end | |||
|id=chr10:52750632..52750698,+ | |||
|ontology_enrichment_celltype=CL:0000055!9.03e-32!180;CL:0000057!3.06e-18!75;CL:0000680!3.92e-18!57;CL:0000056!3.92e-18!57;CL:0000355!3.92e-18!57;CL:0000187!2.23e-17!54;CL:0000183!3.46e-16!59;CL:0000393!5.60e-14!60;CL:0000211!5.60e-14!60;CL:0000192!6.25e-13!42;CL:0000514!6.25e-13!42;CL:0002620!9.68e-10!23;CL:0000359!1.07e-09!32;CL:0002494!2.35e-07!16;CL:0002334!2.94e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0000187;1.12e-11;55!CL:0000192;5.33e-11;43!CL:0002620;1.10e-10;23!CL:0000359;6.16e-10;32!CL:0000393;1.42e-09;61!CL:0000211;1.42e-09;61!CL:0002334;2.27e-08;12!CL:0000057;4.69e-08;73!CL:0002494;1.03e-07;16 | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,7.79e-22,58;CL:0000056,7.79e-22,58;CL:0000355,7.79e-22,58;CL:0000187,6.17e-21,55;CL:0000057,1.95e-18,76;CL:0000393,4.50e-17,61;CL:0000211,4.50e-17,61;CL:0000192,1.25e-15,43;CL:0000514,1.25e-15,43;CL:0000359,6.97e-11,32;CL:0002620,7.62e-11,23;CL:0002334,2.47e-08,12;CL:0002494,8.37e-08,16 | |||
|ontology_enrichment_development_v019=CL:0000355;3.37e-12;58!CL:0000514;5.33e-11;43 | |||
|ontology_enrichment_disease=DOID:2394!6.94e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;5.96e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,4.60e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0004290!4.32e-22!70;UBERON:0002385!1.47e-21!63;UBERON:0001015!1.47e-21!63;UBERON:0000383!1.47e-21!63;UBERON:0001134!8.22e-21!61;UBERON:0002036!8.22e-21!61;UBERON:0003082!8.22e-21!61;UBERON:0000914!2.71e-20!83;UBERON:0002329!2.71e-20!83;UBERON:0003077!2.71e-20!83;UBERON:0003059!2.71e-20!83;UBERON:0007282!2.71e-20!83;UBERON:0009618!2.71e-20!83;UBERON:0007285!2.71e-20!83;UBERON:0000475!1.11e-16!365;UBERON:0000486!3.30e-16!82;UBERON:0004872!6.91e-14!84;UBERON:0005256!9.13e-14!143;UBERON:0000481!9.89e-14!347;UBERON:0002100!6.49e-13!216;UBERON:0007100!1.29e-12!27;UBERON:0000119!1.44e-12!312;UBERON:0000483!2.06e-12!309;UBERON:0000948!3.59e-11!24;UBERON:0005498!3.59e-11!24;UBERON:0004140!3.59e-11!24;UBERON:0009881!3.59e-11!24;UBERON:0004141!3.59e-11!24;UBERON:0003084!3.59e-11!24;UBERON:0007005!3.59e-11!24;UBERON:0004139!3.59e-11!24;UBERON:0004291!3.59e-11!24;UBERON:0000490!7.82e-11!138;UBERON:0000468!4.57e-10!659;UBERON:0007023!7.04e-10!115;UBERON:0001009!1.30e-09!113;UBERON:0003104!2.47e-09!238;UBERON:0009142!2.47e-09!238;UBERON:0003914!3.59e-09!118;UBERON:0004535!1.17e-08!110;UBERON:0002049!2.25e-08!79;UBERON:0007798!2.25e-08!79;UBERON:0001981!2.56e-08!60;UBERON:0007500!2.56e-08!60;UBERON:0004537!2.56e-08!60;UBERON:0006965!2.56e-08!60;UBERON:0004111!1.66e-07!241;UBERON:0000467!1.72e-07!625;UBERON:0001637!1.78e-07!42;UBERON:0003509!1.78e-07!42;UBERON:0004572!1.78e-07!42;UBERON:0000477!1.85e-07!286;UBERON:0003103!2.05e-07!69;UBERON:0000480!2.36e-07!626;UBERON:0000025!2.72e-07!194;UBERON:0000055!7.87e-07!69;UBERON:0002097!8.78e-07!40 | |||
|ontology_enrichment_uberon_v019=UBERON:0002385;2.37e-14;31!UBERON:0001015;2.37e-14;31!UBERON:0000383;2.37e-14;31!UBERON:0007100;1.84e-13;25!UBERON:0000948;8.52e-12;22!UBERON:0001134;1.31e-09;16!UBERON:0002036;1.31e-09;16!UBERON:0002097;7.08e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002329,1.03e-26,71;UBERON:0003059,1.03e-26,71;UBERON:0007282,1.03e-26,71;UBERON:0004290,1.03e-26,71;UBERON:0009618,1.03e-26,71;UBERON:0007524,4.45e-26,73;UBERON:0003077,5.33e-26,72;UBERON:0007285,5.33e-26,72;UBERON:0002385,6.26e-26,64;UBERON:0001015,6.26e-26,64;UBERON:0000383,6.26e-26,64;UBERON:0001134,4.90e-25,62;UBERON:0002036,4.90e-25,62;UBERON:0003082,4.90e-25,62;UBERON:0007503,3.73e-22,78;UBERON:0000486,7.53e-21,83;UBERON:0005256,5.50e-19,122;UBERON:0003104,7.10e-17,160;UBERON:0009142,7.10e-17,160;UBERON:0002100,9.43e-16,199;UBERON:0007100,3.61e-13,27;UBERON:0004872,4.57e-13,83;UBERON:0000490,6.80e-13,148;UBERON:0000948,1.78e-11,24;UBERON:0005498,1.78e-11,24;UBERON:0004140,1.78e-11,24;UBERON:0009881,1.78e-11,24;UBERON:0004141,1.78e-11,24;UBERON:0003084,1.78e-11,24;UBERON:0007005,1.78e-11,24;UBERON:0004139,1.78e-11,24;UBERON:0004291,1.78e-11,24;UBERON:0002097,1.09e-08,41;UBERON:0001009,2.11e-08,112;UBERON:0002199,3.36e-08,46;UBERON:0002416,3.36e-08,46;UBERON:0003914,3.82e-08,117;UBERON:0001637,9.74e-08,42;UBERON:0003509,9.74e-08,42;UBERON:0004572,9.74e-08,42;UBERON:0000926,1.07e-07,315;UBERON:0004120,1.07e-07,315;UBERON:0006603,1.07e-07,315;UBERON:0004535,2.06e-07,109;UBERON:0004797,2.58e-07,7;UBERON:0007500,2.62e-07,59;UBERON:0001981,2.62e-07,59;UBERON:0004537,2.62e-07,59;UBERON:0006965,2.62e-07,59;UBERON:0004573,4.40e-07,33;UBERON:0004571,4.40e-07,33;UBERON:0000483,8.06e-07,306;UBERON:0001135,8.47e-07,15 | |||
|phase1_expression=3.45188920614058,3.8538094300377,9.16203626623813,7.00513088471913,9.83314407740033,7.85104671690332,0,0,0.261185628199839,0.737201809504527,0.697801167972428,0,0.263766978228454,0.123766352960047,0.331397375727916,0.672325146451775,1.80808358407193,0,2.43966399395253,0,0,0,0.572471974262113,0,1.88313959392204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.75227465255847,2.68280343881454,2.04580098949649,0,0.50133791063589,0,1.5905718941022,0,0.567208902984407,0.665188192387692,0.702678285545008,2.03017567021455,0,0,0,0,0,0,0,0,0,0,0,0,1.25849830862972,0.275118041940067,0.208994966536811,0.258416759169329,0,0,0,0,0,0,0,0.535798369704479,0.673588117878509,0.337834441449967,1.53316637465883,0,0.732806975721629,0,0,0,6.46063537203914,10.3837019564955,43.2978021259226,53.6384480800282,12.7680617591409,2.24271040056923,2.1349799145941,0.49333509683432,11.8260193451911,4.98429486657846,2.61539044981534,1.66493170409425,2.30470369792,0.234321431833797,4.99456122928513,1.71141546463335,2.98897361103602,1.64408298101271,1.29498355494505,1.82586048712923,0,0.859840221182376,1.85986406116378,8.31602000097437,14.0942149688777,1.82032272387605,1.43723628363248,0.336672227908132,0.500474079487857,0.277064115484183,0,1.5324389789951,15.7749961851927,0.907457465280168,18.4771324759528,5.12537733164562,4.66250182551036,6.90209520994125,4.53431128649131,28.8557404851105,9.30584281657949,7.08860595413318,2.53336213419116,18.4276655198204,8.10039108052234,0.323292113637624,33.7259112890784,10.9819787068128,1.18692414617341,0,0,0,0,0,0,0.518305275076852,0.504641701751257,0,3.12899064659632,1.92972281457866,0,2.78620756819187,2.16563844500876,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,2.94017422771084,0,0,1.18157981336281,0,0.122988438543114,0.343135620597051,0,0,0,0,2.6064664424826,0,0,0.463721619900307,2.7003999674239,0,0,0.190254152234598,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,3.74637576323797,9.16772221339866,2.34434894420094,5.13217338068116,1.64523988325318,0,1.14330573052231,0.224262168690721,0.87192013766656,0.22001485746285,5.04159691455333,0,5.071816515336,4.25500986535793,3.12022310734098,0,0,0.532844358032199,3.0025378668211,0,3.29296134712308,2.93162565864362,3.55391948742546,0.791951872933429,2.1100756394171,0,2.7992437530976,0,0,0,2.15662369942424,0,1.42636905040718,2.46128221334885,1.02738161275192,4.47652408099739,0,0,0,0,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0.49076596687656,1.00034104211935,0.813795071099207,0,0,0.473107245101804,0,1.20378439891088,4.5481500811197,10.3473071292505,2.65690239414175,2.02806085395873,11.8161715676593,1.37060810223918,1.71571711905428,0,0,0,0,0,0.30239029332968,5.70647957983187,8.44040853084343,2.80660094433074,10.1229927912004,7.16390148693385,8.5252578206112,4.45254199334973,4.00945203886904,3.01854933032316,4.68124789278712,5.19254429183621,3.60252173225874,0,0,0.276242966807689,1.14814448164607,1.82091168006717,9.44095787707854,0,0.15403067420883,0,1.46139224653261,0,0,0.340187410553031,0.215915916102139,0,0,0,0,0,0,0,0,0.769350375349168,0.328014645699706,0.976135183992909,6.38854272215878,2.7470839445503,3.54790849658528,1.72279661398852,0,3.21367859688319,6.18692597069581,1.84858340537573,2.14905144616581,2.06754858726796,7.62683738564743,7.97591816528257,5.45450415463046,5.07482603186403,0,0,0.127612712494584,0,3.253918845081,30.2219852957414,7.6674099717666,2.46426864140871,4.25844824253617,5.21959795245044,1.29726953372744,8.73061809126147,4.46590043231601,6.32758849437452,5.52827562379092,1.79128453917934,14.9778645811872,3.18203247925937,1.56989728039846,12.2313271156654,10.4324071299701,11.3099906251859,2.83055474202642,1.58510321173008,2.94880919367287,0,2.43713489631284,0,2.59349831675173,5.79762271010222,3.39024349860728,3.30819206127675,2.65375590096488,1.75380354101505,2.89387767133344,5.9030527684197,3.65238678532867,5.5768229657955,1.69017361519345,3.29846110069318,1.8667317792493,2.85336841185,3.19284957663538,0,1.31717957183961,0.379473173765715,0,0,0.670302275535787,0,5.93105944893709,0,0,0,0,0,0,0,0,0,0,0,0,7.1572127655407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.80921266106924,0,0,0,0,0,0,0,0.844016498463076,1.11308705022906,0,0,32.0789261084222,1.38141957765574,0,0,0,10.2643063928396,0,0,0,3.55116260292961,0,3.33410970433911,0,0.463840490809256,0,0,0,2.89999830173917,0.1137934482855,1.27126825146383,0,0,0,0,0.885741385813839,0.60298219312704,0,0.663475559587348,1.47773809476774,1.53569778007781,0,0.697118721393016,4.69396576873162,3.87402989879804,0,0,0,0,0.274792780205587,0,0,0,0,0,0,0,0,0,0,0,0,6.92443647174692,2.98578579323551,4.86516604768365,1.22206028986725,0,0,0,0.741412462787447,12.8412423567806,0,0,0,0,0.394584402849391,1.20990716048664,0,8.71974798873134,1.05226393590145,2.28114021073944,0,0,0,0,0,0,0,0,0,3.14508002835654,0,0,0,0,2.0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| ||
|short_description=p2@PRKG1 | |||
}} | }} |
Latest revision as of 11:25, 18 September 2015
Short description: | p2@PRKG1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PRKG1_5end |
Coexpression cluster: | NA |
Association with transcript: | -212bp_to_NM_001098512_5end |
EntrezGene: | PRKG1 |
HGNC: | 9414 |
UniProt: | Q13976 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 7.79e-22 | 58 |
myoblast | 7.79e-22 | 58 |
multi-potent skeletal muscle stem cell | 7.79e-22 | 58 |
muscle cell | 6.17e-21 | 55 |
fibroblast | 1.95e-18 | 76 |
electrically responsive cell | 4.50e-17 | 61 |
electrically active cell | 4.50e-17 | 61 |
smooth muscle cell | 1.25e-15 | 43 |
smooth muscle myoblast | 1.25e-15 | 43 |
vascular associated smooth muscle cell | 6.97e-11 | 32 |
skin fibroblast | 7.62e-11 | 23 |
preadipocyte | 2.47e-08 | 12 |
cardiocyte | 8.37e-08 | 16 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 4.60e-08 | 14 |