FFCP PHASE1:Hg19::chr10:43904235..43904322,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:43904235..43904322,- to FFCP PHASE1:Hg19::chr10:43904235..43904322,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3185 | |EntrezGene=3185 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5039 | |HGNC=5039 | ||
|TSSclassifier=strong | |||
|UniProt=P52597 | |UniProt=P52597 | ||
|association_with_transcript=7bp_to_ENST00000356053_5end | |||
|cluster_id=chr10:43904235..43904322,- | |||
|description=CAGE_peak_5_at_HNRNPF_5end | |||
|id=chr10:43904235..43904322,- | |||
|ontology_enrichment_celltype=CL:0000037!5.24e-14!172;CL:0000566!5.24e-14!172;CL:0002032!3.32e-13!165;CL:0000837!3.32e-13!165;CL:0000988!5.41e-13!182;CL:0000738!5.92e-10!140;CL:0000763!1.63e-09!112;CL:0000049!1.63e-09!112;CL:0002031!2.57e-07!124;CL:0000860!8.68e-07!45 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,2.70e-14,168;CL:0002032,1.75e-13,161;CL:0000837,1.75e-13,161;CL:0000988,2.23e-13,177;CL:0000738,3.35e-10,136;CL:0000763,2.24e-09,108;CL:0000049,2.24e-09,108;CL:0002031,1.68e-07,120 | |||
|ontology_enrichment_development_v019=UBERON:0008947;4.06e-07;29 | |||
|ontology_enrichment_disease=DOID:162!4.12e-22!235;DOID:14566!6.94e-22!239;DOID:305!9.15e-17!106;DOID:0050687!2.75e-14!143;DOID:0050686!4.07e-11!137;DOID:2531!5.58e-08!51;DOID:0060083!5.58e-08!51 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.96e-22,235;DOID:14566,4.03e-22,239;DOID:305,6.56e-17,106;DOID:0050687,1.24e-14,143;DOID:0050686,3.10e-11,137;DOID:2531,4.52e-08,51;DOID:0060083,4.52e-08,51 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p5@HNRNPF | |||
}} | }} |
Latest revision as of 06:18, 18 September 2015
Short description: | p5@HNRNPF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_HNRNPF_5end |
Coexpression cluster: | NA |
Association with transcript: | 7bp_to_ENST00000356053_5end |
EntrezGene: | HNRNPF |
HGNC: | 5039 |
UniProt: | P52597 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 2.70e-14 | 168 |
hematopoietic oligopotent progenitor cell | 1.75e-13 | 161 |
hematopoietic multipotent progenitor cell | 1.75e-13 | 161 |
hematopoietic cell | 2.23e-13 | 177 |
leukocyte | 3.35e-10 | 136 |
myeloid cell | 2.24e-09 | 108 |
common myeloid progenitor | 2.24e-09 | 108 |
hematopoietic lineage restricted progenitor cell | 1.68e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.96e-22 | 235 |
disease of cellular proliferation | 4.03e-22 | 239 |
carcinoma | 6.56e-17 | 106 |
cell type cancer | 1.24e-14 | 143 |
organ system cancer | 3.10e-11 | 137 |
hematologic cancer | 4.52e-08 | 51 |
immune system cancer | 4.52e-08 | 51 |