FFCP PHASE1:Hg19::chr10:33221467..33221474,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:33221467..33221474,- to FFCP PHASE1:Hg19::chr10:33221467..33221474,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3688 | |EntrezGene=3688 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6153 | |HGNC=6153 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=170bp_to_ENST00000464001_5end | |||
|cluster_id=chr10:33221467..33221474,- | |||
|description=CAGE_peak_12_at_ITGB1_5end | |||
|id=chr10:33221467..33221474,- | |||
|ontology_enrichment_celltype=CL:0000055!1.43e-13!180;CL:0000057!1.72e-11!75;CL:0000144!1.05e-08!625;CL:0002620!1.21e-08!23;CL:0000222!1.95e-08!119;CL:0000723!2.73e-08!436;CL:0000034!9.12e-08!444;CL:0000048!1.33e-07!430;CL:0000548!2.05e-07!679;CL:0000004!2.05e-07!679;CL:0000255!2.05e-07!679;CL:0002371!3.00e-07!591;CL:0000012!3.35e-07!682;CL:0000680!4.07e-07!57;CL:0000056!4.07e-07!57;CL:0000355!4.07e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0002620;5.19e-11;23!CL:0000134;2.04e-10;55!CL:0000048;2.62e-09;58!CL:0000569;3.65e-08;4!CL:0000723;3.72e-08;61!CL:0000034;8.88e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,7.44e-11,23;CL:0000057,1.77e-09,76;CL:0000569,1.50e-08,4;CL:0000011,1.50e-08,4;CL:0000723,1.77e-07,433;CL:0000048,2.10e-07,427;CL:0000034,5.07e-07,441 | |||
|ontology_enrichment_development_v019=CL:0000011;3.65e-08;4 | |||
|ontology_enrichment_disease=DOID:2394!3.59e-09!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.22e-15;14!DOID:193;2.46e-07;29!DOID:120;8.51e-07;27 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,4.54e-16,14;DOID:193,1.61e-07,29;DOID:120,5.42e-07,27 | |||
|ontology_enrichment_uberon=UBERON:0000914!3.72e-08!83;UBERON:0002329!3.72e-08!83;UBERON:0003077!3.72e-08!83;UBERON:0003059!3.72e-08!83;UBERON:0007282!3.72e-08!83;UBERON:0009618!3.72e-08!83;UBERON:0007285!3.72e-08!83;UBERON:0004872!1.22e-07!84;UBERON:0002097!1.73e-07!40;UBERON:0004290!5.06e-07!70;UBERON:0001637!5.81e-07!42;UBERON:0003509!5.81e-07!42;UBERON:0004572!5.81e-07!42;UBERON:0004535!5.89e-07!110;UBERON:0002049!8.25e-07!79;UBERON:0007798!8.25e-07!79;UBERON:0002385!8.61e-07!63;UBERON:0001015!8.61e-07!63;UBERON:0000383!8.61e-07!63 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;4.16e-07;41!UBERON:0002118;6.97e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,7.32e-09,41;UBERON:0002199,1.80e-08,46;UBERON:0002416,1.80e-08,46;UBERON:0004872,1.28e-07,83;UBERON:0000948,3.56e-07,24;UBERON:0005498,3.56e-07,24;UBERON:0004140,3.56e-07,24;UBERON:0009881,3.56e-07,24;UBERON:0004141,3.56e-07,24;UBERON:0003084,3.56e-07,24;UBERON:0007005,3.56e-07,24;UBERON:0004139,3.56e-07,24;UBERON:0004291,3.56e-07,24;UBERON:0002118,4.30e-07,5;UBERON:0004573,9.28e-07,33;UBERON:0004571,9.28e-07,33 | |||
|phase1_expression=0.726713517082227,1.49870366723688,0.704772020479856,7.00513088471913,4.02264984984559,2.61701557230111,0,0,0,0.491467873003018,0,0,0,0.495065411840187,2.31978163009541,1.34465029290355,1.20538905604795,0,0.975865597581014,0.123121058076788,0,0,0,0.136874425072884,0.376627918784408,0,0,0,0,0,0.309632246632152,0,0,1.10926203050036,0,0,0,0,0,0.217010870715852,0,0.32389366601898,0,0.145398238779565,0,0.970336244751265,0.464858073811369,0.411167888021826,0.619412741790207,0.28769239232215,0.256160706529101,0.236482229888585,0,0,0,0.752969358170419,1.09162460023138,0.449446968890169,0.306083892370903,0.320929027076094,0.639337125799041,0,0.398927315243264,0,0.580418477257168,0.56738522469114,0,0.75374599577023,1.0429658368404,0,0.605399502633369,0,0.949387162322653,0,0.212604299965044,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0.589211814949674,0.443067789167242,0.270803863765016,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0.651083453856419,0,0,0.127986611154418,0,0,0,0,0.267440195783507,0.144824403882799,4.87613732627923,1.34140171940727,0.383587685530591,0.722878304769133,1.00267582127178,0.724232594804119,0.795285947051099,0.486634870302636,0.378139268656271,1.10864698731282,0.614843499851882,0,0,0,0,0.174129737299267,0.398873881556595,0,0,0,0,0,0.347140501607594,0,0.419499436209906,2.47606237746061,0.626984899610432,0.258416759169329,0.71153252537342,0.66944122552934,0.805658634218294,0,0.24406205754817,0.367663080345869,1.62028389576352,0.357198913136319,0,0.450445921933289,0,0,0.366403487860815,0,0,0,1.98788780678127,0.379891534993739,1.05927344650575,6.59724227722272,2.83734705758686,0,1.06748995729705,0.24666754841716,0.311211035399766,0.942974704487816,0.653847612453835,0.151357427644931,0.576175924479999,0,1.24864030732128,0,0.747243402759005,0.469737994575059,0.485618833104395,0.421352420106746,0,0,0.619954687054593,0,0.989067717114227,0,0,0.168336113954066,0.125118519871964,1.10825646193673,0,0.612975591598039,0.901428353439581,0.567160915800105,2.15267562826634,0.640672166455702,1.48352330811693,1.50045548042201,1.54578793857658,2.06112432036503,1.48893485065272,1.18143432568886,1.46155507741798,3.02920529092937,0.920498986422993,1.13152239773168,5.32514388774922,1.0075209822764,0.508681776931463,0.386521706326594,0.272746120590835,0,0.487894824518382,0,0,0.207322110030741,0,0,0,1.92972281457866,0,0.928735856063958,1.44375896333917,0.118306800039844,0,0.241011029883482,0.220587945464788,0,0.237270619111097,0.269662616320329,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0.590789906681404,0,0,0.343135620597051,0.658501712451753,1.1240175325762,0.402115889646523,0.370353780634118,0.325808305310325,0,0,0,0.117408694235822,0.144366447761074,0.925971025153221,0.570762456703795,0,0,0.246217006087397,0.234004265139238,0.148631162288728,0,1.51183915378974,0.283550194484773,0.268675568108545,0.581267877027924,0,0,0.088048434013226,0,0,0.25248486685276,0.063497894292169,0,0,0,0.514137463516618,0,0,0.112131084345361,0,0.36669142910475,0.129271715757778,0,0,1.59562869950922,2.08014873822732,0,0,0.266422179016099,0.714889968290738,0,1.64648067356154,0.977208552881205,0.355391948742546,0,0.602878754119172,0,2.49932477955143,0,0,0,0.718874566474748,0,0,0.579125226670317,1.84928690295345,0.179060963239896,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0.414415513436035,0.36807447515742,0,0.542530047399471,1.66376689224646,2.3195768543631,1.26161932027148,0.35142424497814,0,0,1.03473071292505,1.32845119707087,0.368738337083406,0.347534457872331,0,0,0,0,0,0,0,0,0.248107807818777,0.61384789315225,1.12264037773229,0.512556597022804,0.511707249066704,1.93024705372329,1.48418066444991,0.462629081407967,1.24293207719189,0.574890092096664,0,1.27831416305955,0.120859449591622,0.40101294060657,1.56537681191024,0.34444334449382,0.182091168006717,0.655622074797121,0,0.924184045252977,0,0,1.05551628892876,0,0,1.72732732881711,0,0.270946437543853,0,0.254876273045038,0,0,0,0,0,0,0,0.103041011647722,0.27470839445503,0.165018999841176,0,0,3.21367859688319,0.193341436584244,0.154048617114644,0.460511024178389,0.413509717453592,0.322260734604821,0.580066775656914,0.426133137080504,0,0.495854746082934,0.768760269460425,0.127612712494584,1.0115778085555,0.929691098594572,8.18512101759664,0,0,1.06461206063404,1.73986598415015,0.37064843820784,1.00187420719394,0.372158369359667,0.632758849437452,0.190630193923825,0.255897791311334,0,0.318203247925937,3.92474320099615,0.179872457583315,0.274537029736055,0.824686816419805,0,0,1.26377536871694,0.48763373908959,0.731140468893853,2.11300293513511,1.36499911407986,0.707027159768564,1.13008116620243,0,0.66343897524122,0.876901770507525,0,0,0.405820753925408,0.30982349809975,0.281695602532241,0,0.196498082026242,0.7133421029625,0.709522128141196,1.05553817648832,1.31717957183961,0.379473173765715,0,0.384888450902048,0,0,0.0941438007767792,0.43050537267123,0,0,0.459446800413919,0,0.764637207142375,0.569647187174163,0,0,0,0,0,0.320472213382419,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| ||
|short_description=p12@ITGB1 | |||
}} | }} |
Latest revision as of 00:27, 18 September 2015
Short description: | p12@ITGB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_ITGB1_5end |
Coexpression cluster: | NA |
Association with transcript: | 170bp_to_ENST00000464001_5end |
EntrezGene: | ITGB1 |
HGNC: | 6153 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 7.44e-11 | 23 |
fibroblast | 1.77e-09 | 76 |
cardiac mesenchymal cell | 1.50e-08 | 4 |
migratory trunk neural crest cell | 1.50e-08 | 4 |
somatic stem cell | 1.77e-07 | 433 |
multi fate stem cell | 2.10e-07 | 427 |
stem cell | 5.07e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
skin of body | 7.32e-09 | 41 |
integument | 1.80e-08 | 46 |
integumental system | 1.80e-08 | 46 |
splanchnic layer of lateral plate mesoderm | 1.28e-07 | 83 |
heart | 3.56e-07 | 24 |
primitive heart tube | 3.56e-07 | 24 |
primary heart field | 3.56e-07 | 24 |
anterior lateral plate mesoderm | 3.56e-07 | 24 |
heart tube | 3.56e-07 | 24 |
heart primordium | 3.56e-07 | 24 |
cardiac mesoderm | 3.56e-07 | 24 |
cardiogenic plate | 3.56e-07 | 24 |
heart rudiment | 3.56e-07 | 24 |
right ovary | 4.30e-07 | 5 |
systemic artery | 9.28e-07 | 33 |
systemic arterial system | 9.28e-07 | 33 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 4.54e-16 | 14 |
reproductive organ cancer | 1.61e-07 | 29 |
female reproductive organ cancer | 5.42e-07 | 27 |