FFCP PHASE1:Hg19::chr10:33218945..33218966,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:33218945..33218966,- to FFCP PHASE1:Hg19::chr10:33218945..33218966,-: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:33218945..33218966,- | |||
|coexpression_cluster_id=C582 | |||
|description=CAGE_peak_at_chr10:33218945..33218966,- | |||
|id=chr10:33218945..33218966,- | |||
|ontology_enrichment_celltype=CL:0000055!4.27e-14!180;CL:0000057!2.89e-12!75;CL:0000548!7.51e-10!679;CL:0000004!7.51e-10!679;CL:0000255!7.51e-10!679;CL:0000012!4.71e-09!682;CL:0000144!3.11e-08!625;CL:0002371!1.35e-07!591;CL:0000048!1.38e-07!430;CL:0002620!1.56e-07!23;CL:0000723!2.60e-07!436;CL:0002334!5.00e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0002334;1.40e-08;12!CL:0000134;4.45e-08;55!CL:0002620;2.25e-07;23!CL:0000723;4.61e-07;61!CL:0000048;5.44e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,4.57e-15,76;CL:0000723,2.50e-11,433;CL:0000048,2.89e-11,427;CL:0000034,2.35e-10,441;CL:0002334,1.97e-08,12;CL:0002620,2.98e-07,23 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!8.14e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;4.53e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,3.81e-09,14 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,4.14e-07,99;UBERON:0002199,5.02e-07,46;UBERON:0002416,5.02e-07,46;UBERON:0002097,6.54e-07,41 | |||
|phase1_expression=2.36181893051724,11.1332272423311,4.79244973926302,9.00659685178174,4.46961094427288,2.61701557230111,0,1.26343974685366,0.522371256399677,0,0,1.09220686065086,0.263766978228454,1.48519623552056,0.994192127183747,5.3786011716142,6.62963980826375,2.92124036154949,5.36726078669558,0.123121058076788,0,0,0.85870796139317,1.23186982565596,0.627713197974014,0.0764134057479513,0.0821005894499457,0,0,0,0,0,0,0.369754010166788,0.0774672005803016,0.142169232487422,0,0,1.00272223735071,0.217010870715852,0,0.647787332037959,0.257575567634187,0.872389432677388,0.377875943688809,0.970336244751265,1.39457422143411,1.6446715520873,1.85823822537062,1.1507695692886,0,0.47296445977717,1.03423704220986,0,0,2.82363509313907,3.82068610080984,0.674170453335254,3.06083892370903,0.320929027076094,1.91801137739712,0.659702600373432,0.398927315243264,0.426224750532694,4.64334781805734,3.40431134814684,0.622822248995575,1.50749199154046,0.521482918420201,0.65156653411535,1.81619850790011,0.368277635987565,1.89877432464531,0.211255286311942,0.637812899895131,0.209658645508376,0.22465726229299,0.150176892841506,0.16072558669708,0.285012743741249,0.39783335439818,0.365328307529268,0,0,0.889509253863555,0.426730222566507,0.400395987036012,0,0,0,0,0,0.764546456250458,0,0,0,0.393419540227666,0.786021525498329,2.2616164889946,0,0,0.473447805734733,0,0.445641827540694,0.589211814949674,0.443067789167242,1.62482318259009,0.128091319725675,0.130059347559878,0,0,0,0,0,0,0.113309342697566,0.383220493601921,0.34362744548263,1.01207876807801,0.318565414324097,0,0,0.301150238155546,0,0,0.236777252044017,0,0,1.06976078313403,0.579297615531196,2.43806866313962,3.35350429851818,0.767175371061182,4.3372698286148,1.00267582127178,3.33146993609895,2.3858578411533,3.40644409211845,1.51255707462509,1.55210578223795,1.58102614247627,0.0654895377488563,0,0.370784442784429,0.324547393654683,0.870648686496336,2.26028532882071,0,0,0,0.198762407366705,0,1.04142150482278,1.13061588384802,1.25849830862972,0.550236083880135,0.835979866147242,1.29208379584664,1.06729878806013,1.33888245105868,0.402829317109147,0.760272105718513,0.976248230192678,0,0.81014194788176,2.05389375053383,0.22452937262617,1.23872628531654,0,0.949265659568129,1.28241220751285,0,0,0.436094052142534,14.4121865991642,3.16576279161449,2.38336525463794,13.1944845544454,7.4480360261655,2.24271040056923,3.20246987189115,1.48000529050296,2.17847724779836,2.55950276932407,1.63461903113459,0.151357427644931,1.15235184896,0.234321431833797,0.624320153660641,0.570471821544449,2.09228152772521,1.52664848236894,0.971237666208789,0.98315564691574,1.42907919878425,1.47401180774122,1.23990937410919,0,3.95627086845691,0,0,0.841680569770331,1.25118519871964,0.554128230968366,0.438977620880838,1.83892677479412,1.65261864797256,1.70148274740032,9.32826105582082,4.91181994282705,6.78182083710598,11.4034616512073,3.60683852334536,3.09168648054755,4.46680455195816,6.24472429292685,3.31285817548075,5.04867548488229,3.68199594569197,2.58633690910099,15.2654124782144,3.32481924151213,2.7129694769678,1.93260853163297,2.72746120590835,1.14721838155602,0.365921118388786,0.397589304964456,0.813357600086629,1.0366105501537,0.504641701751257,0.36497735907583,1.56449532329816,10.935095949279,0,3.25057549622385,1.44375896333917,0.946454400318751,1.68584690078102,1.44606617930089,1.54411561825352,2.17879444092406,1.42362371466658,1.34831308160164,0.98110732562673,2.30848294167834,1.4763109092493,0,0,0,2.53510069643662,0.982827216677626,2.95394953340702,0.441463099414651,0.368965315629341,2.40194934417936,1.20725313949488,0,2.41269533787914,1.94435734832912,0,0,1.44331342025273,0.811512834825538,0.587043471179108,0.433099343283221,1.38895653772983,3.42457474022277,0,0,0.984868024349589,0.468008530278475,0.297262324577456,0,3.52762469217605,2.41017665312057,2.4180801129769,2.3250715081117,0.383382679165211,0.985326475791887,0.616339038092582,0,0,0,0.380987365753014,0,0,0,0.925447434329912,0.901029173531752,1.14330573052231,0.448524337381443,0.43596006883328,2.12681028880755,3.23179289394444,0,3.381211010224,4.5209479819428,3.12022310734098,0,0,0.266422179016099,3.57444984145369,0.542621605391443,0.823240336780769,0.65147236858747,2.48774364119782,0.791951872933429,4.52159065589379,0,8.89759621520308,0,1.00451418286425,6.32501818449095,5.03212196532324,2.29723871668228,1.42636905040718,4.48822050669496,2.87666851570537,1.96967059563885,0.336255431980582,1.18218456121156,0.431255149719035,1.41177339907723,0.254094624222463,1.30139853857622,1.54657762555539,0.335032530668698,0.637938751653163,0,0,0.414415513436035,1.10422342547226,1.50051156317903,1.08506009479894,6.23912584592421,8.74302045106093,7.09660867652706,3.5142424497814,0,6.82222512167955,0,5.97803038681893,1.29058417979192,2.25897397617015,0,0.343143423810856,0.620304078368662,0.647142602455851,0.853820462427555,0,0,0.604780586659361,5.21026396419431,3.06923946576125,7.01650236082684,3.20347873139252,9.72243773226737,9.81208918976006,5.93672265779964,3.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| ||
|short_description=p@chr10:33218945..33218966,- | |||
}} | }} |
Latest revision as of 13:19, 23 July 2015
Short description: | p@chr10:33218945..33218966, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:33218945..33218966, - |
Coexpression cluster: | C582_Smooth_tenocyte_mesenchymal_leiomyoma_Fibroblast_Olfactory_Aortic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 4.57e-15 | 76 |
somatic stem cell | 2.50e-11 | 433 |
multi fate stem cell | 2.89e-11 | 427 |
stem cell | 2.35e-10 | 441 |
preadipocyte | 1.97e-08 | 12 |
skin fibroblast | 2.98e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
surface structure | 4.14e-07 | 99 |
integument | 5.02e-07 | 46 |
integumental system | 5.02e-07 | 46 |
skin of body | 6.54e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 3.81e-09 | 14 |