FFCP PHASE1:Hg19::chr10:17276737..17276787,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:17276737..17276787,+ to FFCP PHASE1:Hg19::chr10:17276737..17276787,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:17276737..17276787,+ | |||
|coexpression_cluster_id=C581 | |||
|description=CAGE_peak_at_chr10:17276737..17276787,+ | |||
|id=chr10:17276737..17276787,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.60e-30!180;CL:0002371!6.93e-26!591;CL:0000048!1.53e-23!430;CL:0000144!3.91e-23!625;CL:0000723!1.08e-21!436;CL:0000034!1.34e-20!444;CL:0000057!7.99e-19!75;CL:0000222!1.65e-14!119;CL:0002057!2.43e-13!42;CL:0002320!2.43e-13!365;CL:0000012!5.03e-13!682;CL:0000548!6.62e-13!679;CL:0000004!6.62e-13!679;CL:0000255!6.62e-13!679;CL:0000134!6.00e-12!358;CL:0000860!1.14e-11!45;CL:0000219!1.78e-11!390;CL:0000680!2.35e-11!57;CL:0000056!2.35e-11!57;CL:0000355!2.35e-11!57;CL:0002009!6.02e-11!65;CL:0000183!1.12e-10!59;CL:0000187!1.44e-10!54;CL:0002194!1.75e-10!63;CL:0000576!1.75e-10!63;CL:0000040!1.75e-10!63;CL:0000559!1.75e-10!63;CL:0000557!2.71e-10!71;CL:0000393!2.14e-09!60;CL:0000211!2.14e-09!60;CL:0000839!3.01e-09!70;CL:0000192!3.32e-09!42;CL:0000514!3.32e-09!42;CL:0002620!3.85e-09!23;CL:0000766!4.58e-09!76;CL:0000003!2.36e-08!722;CL:0000359!1.03e-07!32 | |||
|ontology_enrichment_celltype_v019=CL:0000860;8.93e-15;33!CL:0002057;8.93e-15;33!CL:0000473;2.07e-13;39!CL:0000234;2.07e-13;39!CL:0002620;2.15e-09;23!CL:0000057;3.86e-08;73!CL:0000359;1.74e-07;32!CL:0000192;2.98e-07;43!CL:0000187;9.71e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,1.80e-24,427;CL:0000723,9.31e-23,433;CL:0000034,2.36e-21,441;CL:0000057,1.11e-19,76;CL:0000222,3.30e-15,121;CL:0000473,3.83e-15,48;CL:0000234,3.83e-15,48;CL:0000860,1.09e-13,42;CL:0002057,1.09e-13,42;CL:0002320,1.32e-13,361;CL:0002009,1.76e-12,61;CL:0000134,3.55e-12,354;CL:0000680,5.01e-12,58;CL:0000056,5.01e-12,58;CL:0000355,5.01e-12,58;CL:0002194,5.45e-12,59;CL:0000576,5.45e-12,59;CL:0000040,5.45e-12,59;CL:0000559,5.45e-12,59;CL:0000219,6.28e-12,386;CL:0000557,1.39e-11,67;CL:0000187,3.27e-11,55;CL:0000839,1.53e-10,66;CL:0000766,5.02e-10,72;CL:0000192,8.22e-10,43;CL:0000514,8.22e-10,43;CL:0000393,8.54e-10,61;CL:0000211,8.54e-10,61;CL:0002620,2.30e-09,23;CL:0000359,6.76e-08,32 | |||
|ontology_enrichment_development_v019=CL:0002057;2.44e-10;42!CL:0000514;2.98e-07;43!CL:0000355;8.10e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!2.72e-24!167;UBERON:0003081!3.83e-20!216;UBERON:0000914!1.13e-15!83;UBERON:0002329!1.13e-15!83;UBERON:0003077!1.13e-15!83;UBERON:0003059!1.13e-15!83;UBERON:0007282!1.13e-15!83;UBERON:0009618!1.13e-15!83;UBERON:0007285!1.13e-15!83;UBERON:0002049!5.09e-15!79;UBERON:0007798!5.09e-15!79;UBERON:0004290!3.92e-14!70;UBERON:0002384!9.93e-14!375;UBERON:0000055!1.22e-13!69;UBERON:0004535!4.83e-13!110;UBERON:0004765!1.97e-12!101;UBERON:0001434!1.97e-12!101;UBERON:0001009!2.75e-12!113;UBERON:0004872!2.95e-12!84;UBERON:0001981!4.57e-12!60;UBERON:0007500!4.57e-12!60;UBERON:0004537!4.57e-12!60;UBERON:0006965!4.57e-12!60;UBERON:0000926!6.86e-12!448;UBERON:0004120!6.86e-12!448;UBERON:0006603!6.86e-12!448;UBERON:0002371!2.29e-11!80;UBERON:0001637!2.47e-11!42;UBERON:0003509!2.47e-11!42;UBERON:0004572!2.47e-11!42;UBERON:0001134!6.83e-11!61;UBERON:0002036!6.83e-11!61;UBERON:0003082!6.83e-11!61;UBERON:0001474!8.52e-11!86;UBERON:0000486!1.33e-10!82;UBERON:0002385!3.78e-10!63;UBERON:0001015!3.78e-10!63;UBERON:0000383!3.78e-10!63;UBERON:0004573!5.31e-09!33;UBERON:0004571!5.31e-09!33;UBERON:0002193!7.66e-08!112;UBERON:0002199!3.66e-07!45;UBERON:0002416!3.66e-07!45;UBERON:0002390!8.22e-07!102;UBERON:0003061!8.22e-07!102;UBERON:0000947!9.58e-07!21;UBERON:0010191!9.58e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;1.94e-08;42!UBERON:0003509;1.94e-08;42!UBERON:0004572;1.94e-08;42!UBERON:0004573;2.90e-08;33!UBERON:0004571;2.90e-08;33!UBERON:0007500;8.89e-08;56!UBERON:0001981;8.89e-08;56!UBERON:0004537;8.89e-08;56!UBERON:0000055;3.80e-07;65!UBERON:0002049;6.04e-07;75!UBERON:0007798;6.04e-07;75!UBERON:0002384;8.40e-07;198!UBERON:0000947;9.02e-07;21!UBERON:0010191;9.02e-07;21 | |||
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| ||
|short_description=p@chr10:17276737..17276787,+ | |||
}} | }} |
Latest revision as of 12:16, 23 July 2015
Short description: | p@chr10:17276737..17276787, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:17276737..17276787, + |
Coexpression cluster: | C581_Fibroblast_Keratocytes_Lens_CD14_Mesenchymal_Hepatic_Hair |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 1.80e-24 | 427 |
somatic stem cell | 9.31e-23 | 433 |
stem cell | 2.36e-21 | 441 |
fibroblast | 1.11e-19 | 76 |
mesodermal cell | 3.30e-15 | 121 |
defensive cell | 3.83e-15 | 48 |
phagocyte | 3.83e-15 | 48 |
classical monocyte | 1.09e-13 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.09e-13 | 42 |
connective tissue cell | 1.32e-13 | 361 |
macrophage dendritic cell progenitor | 1.76e-12 | 61 |
mesenchymal cell | 3.55e-12 | 354 |
muscle precursor cell | 5.01e-12 | 58 |
myoblast | 5.01e-12 | 58 |
multi-potent skeletal muscle stem cell | 5.01e-12 | 58 |
monopoietic cell | 5.45e-12 | 59 |
monocyte | 5.45e-12 | 59 |
monoblast | 5.45e-12 | 59 |
promonocyte | 5.45e-12 | 59 |
motile cell | 6.28e-12 | 386 |
granulocyte monocyte progenitor cell | 1.39e-11 | 67 |
muscle cell | 3.27e-11 | 55 |
myeloid lineage restricted progenitor cell | 1.53e-10 | 66 |
myeloid leukocyte | 5.02e-10 | 72 |
smooth muscle cell | 8.22e-10 | 43 |
smooth muscle myoblast | 8.22e-10 | 43 |
electrically responsive cell | 8.54e-10 | 61 |
electrically active cell | 8.54e-10 | 61 |
skin fibroblast | 2.30e-09 | 23 |
vascular associated smooth muscle cell | 6.76e-08 | 32 |