FFCP PHASE1:Hg19::chr10:125013755..125013768,+: Difference between revisions
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m (moved FFCP PHASE1 hg19::chr10:125013755..125013768,+ to FFCP PHASE1:Hg19::chr10:125013755..125013768,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:125013755..125013768,+ | |||
|description=CAGE_peak_at_chr10:125013755..125013768,+ | |||
|id=chr10:125013755..125013768,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000222;2.28e-10;1 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002780!3.13e-15!41;UBERON:0001890!3.13e-15!41;UBERON:0006240!3.13e-15!41;UBERON:0003080!1.28e-14!42;UBERON:0001049!4.44e-14!57;UBERON:0005068!4.44e-14!57;UBERON:0006241!4.44e-14!57;UBERON:0007135!4.44e-14!57;UBERON:0000955!6.10e-13!69;UBERON:0006238!6.10e-13!69;UBERON:0000073!6.66e-13!94;UBERON:0001016!6.66e-13!94;UBERON:0001017!2.22e-12!82;UBERON:0005743!6.70e-12!86;UBERON:0007023!7.69e-12!115;UBERON:0001869!1.93e-11!32;UBERON:0002616!2.83e-11!59;UBERON:0001893!3.11e-11!34;UBERON:0000956!4.97e-11!25;UBERON:0000203!4.97e-11!25;UBERON:0002791!5.73e-11!33;UBERON:0002020!2.01e-10!34;UBERON:0003528!2.01e-10!34;UBERON:0002619!3.09e-09!22;UBERON:0001950!4.08e-09!20;UBERON:0002346!1.23e-08!90;UBERON:0003075!1.85e-08!86;UBERON:0007284!1.85e-08!86;UBERON:0003056!2.16e-08!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0003296;3.49e-21;4!UBERON:0010133;3.49e-21;4!UBERON:0000007;1.97e-19;2!UBERON:0001894;2.31e-12;7!UBERON:0001874;2.28e-10;1!UBERON:0002780;3.55e-09;41!UBERON:0001890;3.55e-09;41!UBERON:0000073;1.50e-08;53!UBERON:0002616;1.50e-08;53!UBERON:0000955;4.67e-08;68!UBERON:0001950;3.79e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003296,3.06e-21,4;UBERON:0010133,3.06e-21,4;UBERON:0000007,9.38e-20,2;UBERON:0002780,7.73e-13,41;UBERON:0001890,7.73e-13,41;UBERON:0003080,7.73e-13,41;UBERON:0006240,7.73e-13,41;UBERON:0001894,2.14e-12,7;UBERON:0006222,2.14e-12,7;UBERON:0000073,2.46e-12,53;UBERON:0002616,2.46e-12,53;UBERON:0001049,1.28e-11,56;UBERON:0005068,1.28e-11,56;UBERON:0006241,1.28e-11,56;UBERON:0007135,1.28e-11,56;UBERON:0000955,1.80e-11,68;UBERON:0006238,1.80e-11,68;UBERON:0001874,2.74e-10,1;UBERON:0001016,3.50e-10,89;UBERON:0001017,1.93e-09,81;UBERON:0003056,2.25e-08,61;UBERON:0003075,1.38e-07,82;UBERON:0007284,1.38e-07,82;UBERON:0002346,3.52e-07,86;UBERON:0001950,4.12e-07,20 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.572471974262113,0.136874425072884,0.376627918784408,0.0764134057479513,0.0821005894499457,0.236132343941038,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0.145398238779565,0,0.242584061187816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0,0.196709770113833,0.393010762749165,0.205601498999509,0.167186495390678,0,0.473447805734733,0,0.111410456885174,0,0.221533894583621,0.270803863765016,0.640456598628376,0.650296737799391,0.657751618414705,0.276350017785848,0.289803085735052,0,0,2.09071047609954,0.339928028092699,0,0,0.506039384039006,0,0,0,0,0,0,0,0,0,0.267440195783507,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0.392937226493138,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0.286836620748814,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0.213557388818567,0,0,0,0,0,0,0,0,0,0,0.355009592516614,0.10075209822764,0,0,0,0,0.121973706129595,0,0,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0,0,0,0,0,0,0,0.492663237895943,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0,0,0.602878754119172,0,0.599837947092342,0,0,0,0,0,0,0,0,0,0.112085143993527,0.197030760201927,0.215627574859517,0.256686072559497,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0.207970861530807,0.178428988797162,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0.200506470303285,0.184161977871793,0,0,0,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0,0.640986253728404,0.165018999841176,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638063562472921,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0.0962221127255121,0,0,0.564862804660675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0.557409525377156,0,2.27653898714925,0,0,0,1.2700414963433,0.324621940274555,0,0,0.47003968731907,0,0.169291777801603,2.24823305145179,1.81619736471943,0,0.343505344755765,0,0.447352215784832,0,0,0,0,0.270455678475983,0,0,0,0.146508179271894,0,0,0.284136146806413,0,0,0,2.98244294329889,0.844016498463076,0.222617410045812,0.329607748453519,0,0.19924798825107,0,0.503865495708552,0,0.369254416383208,0,0,0,0,0,0,0,0,0.0927680981618513,1.99613798001194,0,0.0874599999961957,0,0,0.254253650292766,0,0.344743373241465,0.291604613383254,0.868124974666461,0,0.241192877250816,0,1.10579259931225,0,0,0,0,0.153900517007594,0.227884111694002,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0.476809736941136,0,0.489698424477443,0,0,0,0,0,1.18608451472249,0,0.104421949505455,0.134802265961354,0.802577647298789,0,0.182454789215666,0,0.728341138602278,0.394584402849391,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0.173559738335131,0,0.0870592065804026,0.34945333648406,0.171986032471617,0,0,0,0,0.0882561266915003,0,0.137041924646751,0,0.253243183823515,0.195551382734803,0.0801588202515337,0,0.19980960958213,0,0.343609788497747,0,1.1524383839052,0.99402028452346,0,0.271808412147228,0.104602846312333,0,0.866851769704557,0,0,0,0,0.262887354279314,0,0.916641696046735,0.717873024576814,0.399358000997982,0,0,0.739018197353989,0,0,0,0,0,0.295282444544246,0,0,0.681017030557878,0.160753148465019,0.412618309791701,0,0,0,0.182248669974074,0,0,0.209818352539992,0,0.179287339332845,0,0,0,0,0,0,0,0,0.164185041498678,0.340776043570843,0,0,0,0,0.13223260174269,0,0,0.213574825135389,0.471612915298998,0,0,0,0.121792598380896,0.638341257770182,0,0,0,0,0,0.886068179966986,0.732157589411779,1.001527445652,0,0.332787154610557,0.124192805882767,0.138348634936231,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0,0,0,0.400027764663154,0,0,1.26184898228651,0,0,0.260994291965212,0.226705925512272,0.231522474323834,0.734210113519403,0.537266523244462,0,0.438568099157414,0,0.771656153083659,0,0.512483037175893,0,0,0.553033744606923,0.779441235357554,0,0.490696182767533,0.327609848846413,0,0,0.19998739585493,0.106691729694141,0.172214979660816,0,0.184105950251841,0,0,0,0.323474434190045,0.314531883711793,1.09209638192014,0.169732529954025,0.212574920101683,0,0,0,1.41951141002256,0,0,0,0.385375350578757,1.41696576325585,0.478901577171454,0,0,0,0.322951291263702,0,0.294443155503077,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0.295712172434091,0.0675375846183947,0.781078098613847,0.826747186004736,0.126831620387814,1.09394961803644,0,0,0,0,1.07140367175657,0.336283722218824,1.82089681270989,2.50428410486427,0.177404740325278,0.345701962667338,0,0.0679697329768317,0.0657727735628491,0,0,0.078493092850514,1.09980912941201,0.280272163313789,0,0,0,0.285906176706625,0.158013611732727,0.116241425368125,0.173858272302579,0,0.62164849248911,0.17071847709395,0,0,0.118332000730565,0.170426809518315,0,0,0,0,0,0,0,0,0,0,0,0.2339394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| ||
|short_description=p@chr10:125013755..125013768,+ | |||
}} | }} |
Latest revision as of 11:17, 23 July 2015
Short description: | p@chr10:125013755..125013768, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:125013755..125013768, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gland of diencephalon | 3.06e-21 | 4 |
neuroendocrine gland | 3.06e-21 | 4 |
pituitary gland | 9.38e-20 | 2 |
regional part of forebrain | 7.73e-13 | 41 |
forebrain | 7.73e-13 | 41 |
anterior neural tube | 7.73e-13 | 41 |
future forebrain | 7.73e-13 | 41 |
diencephalon | 2.14e-12 | 7 |
future diencephalon | 2.14e-12 | 7 |
regional part of nervous system | 2.46e-12 | 53 |
regional part of brain | 2.46e-12 | 53 |
neural tube | 1.28e-11 | 56 |
neural rod | 1.28e-11 | 56 |
future spinal cord | 1.28e-11 | 56 |
neural keel | 1.28e-11 | 56 |
brain | 1.80e-11 | 68 |
future brain | 1.80e-11 | 68 |
putamen | 2.74e-10 | 1 |
nervous system | 3.50e-10 | 89 |
central nervous system | 1.93e-09 | 81 |
pre-chordal neural plate | 2.25e-08 | 61 |
neural plate | 1.38e-07 | 82 |
presumptive neural plate | 1.38e-07 | 82 |
neurectoderm | 3.52e-07 | 86 |
neocortex | 4.12e-07 | 20 |