FFCP PHASE1:Hg19::chr10:123845220..123845230,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:123845220..123845230,+ | |||
|coexpression_cluster_id=C2041 | |||
|description=CAGE_peak_at_chr10:123845220..123845230,+ | |||
|id=chr10:123845220..123845230,+ | |||
|ontology_enrichment_celltype=CL:0002076!1.17e-31!43;CL:0002251!1.72e-29!21;CL:0000223!1.02e-21!59;CL:0000066!8.35e-15!254;CL:0002623!3.79e-13!3;CL:0002621!8.46e-13!3;CL:0000076!5.46e-11!62;CL:0000240!5.72e-11!6;CL:0000311!5.72e-11!6;CL:0000079!5.72e-11!6;CL:0000237!5.72e-11!6;CL:0000036!5.72e-11!6;CL:0000357!5.72e-11!6;CL:0000114!5.72e-11!6;CL:0002159!1.60e-10!13;CL:0002368!4.53e-10!13;CL:0000575!5.62e-09!2;CL:0000622!4.76e-08!5;CL:0000312!7.79e-08!5;CL:0000154!9.14e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0001014;1.07e-13;2!CL:0001016;1.07e-13;2!CL:0002567;1.41e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0001014,1.07e-13,2;CL:0001016,1.07e-13,2;CL:0002567,1.19e-09,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1749!1.39e-21!14 | |||
|ontology_enrichment_disease_v019=DOID:3151;5.92e-26;1!DOID:3149;5.92e-26;1!DOID:1749;1.41e-16;14!DOID:3451;1.07e-13;2!DOID:4159;1.07e-13;2!DOID:0060122;1.07e-13;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,4.61e-26,1;DOID:3149,4.61e-26,1;DOID:1749,1.41e-16,14;DOID:3451,9.40e-14,2;DOID:4159,9.40e-14,2;DOID:0060122,9.40e-14,2 | |||
|ontology_enrichment_uberon=UBERON:0000166!4.93e-25!21;UBERON:0000165!2.31e-21!28;UBERON:0000930!2.31e-21!28;UBERON:0003729!6.33e-20!5;UBERON:0000161!6.30e-19!35;UBERON:0003343!2.70e-16!4;UBERON:0004785!2.70e-16!4;UBERON:0001444!2.85e-15!48;UBERON:0001004!4.91e-15!72;UBERON:0003102!7.54e-15!95;UBERON:0001949!8.46e-13!3;UBERON:0000344!2.62e-11!12;UBERON:0000974!1.04e-09!10;UBERON:0004119!3.57e-09!169;UBERON:0000925!3.57e-09!169;UBERON:0006595!3.57e-09!169;UBERON:0000078!2.22e-07!18;UBERON:0001044!9.14e-07!6;UBERON:0003293!9.14e-07!6;UBERON:0003294!9.14e-07!6;UBERON:0010047!9.14e-07!6;UBERON:0000167!9.14e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0003343;1.26e-25;4!UBERON:0004785;1.26e-25;4!UBERON:0000974;1.85e-17;6!UBERON:0003729;1.36e-08;13!UBERON:0000014;1.69e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003343,1.84e-25,4;UBERON:0004785,1.84e-25,4;UBERON:0000974,8.06e-11,10;UBERON:0003729,1.53e-08,13;UBERON:0000014,1.59e-07,4 | |||
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| ||
|short_description=p@chr10:123845220..123845230,+ | |||
}} | }} |
Latest revision as of 11:09, 23 July 2015
Short description: | p@chr10:123845220..123845230, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:123845220..123845230, + |
Coexpression cluster: | C2041_cervical_immature_malignant_keratoacanthoma_salivary_nasal_epidermoid |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 1.07e-13 | 2 |
immature CD1a-positive Langerhans cell | 1.07e-13 | 2 |
light melanocyte | 1.19e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
mucosa of oral region | 1.84e-25 | 4 |
respiratory system mucosa | 1.84e-25 | 4 |
neck | 8.06e-11 | 10 |
mouth mucosa | 1.53e-08 | 13 |
zone of skin | 1.59e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 4.61e-26 | 1 |
keratoacanthoma | 4.61e-26 | 1 |
squamous cell carcinoma | 1.41e-16 | 14 |
skin carcinoma | 9.40e-14 | 2 |
skin cancer | 9.40e-14 | 2 |
integumentary system cancer | 9.40e-14 | 2 |