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FFCP PHASE1:Mm9::chrX:98516580..98516585,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chrX:98516580..98516585,+
|DHSsupport=NA
|short_description=p@chrX:98516580..98516585,+
|DPIdataset=NA
|description=CAGE_peak_at_chrX:98516580..98516585,+
|association_with_transcript=NA
|EntrezGene=NA
|EntrezGene=NA
|HGNC=
|HGNC=
|MCL_coexpression_id=1329
|TSSclassifier=NA
|UniProt=NA
|UniProt=NA
|association_with_transcript=NA
|cluster_id=chrX:98516580..98516585,+
|description=CAGE_peak_at_chrX:98516580..98516585,+
|id=chrX:98516580..98516585,+
|ontology_enrichment_celltype=CL:0000221!6.15e-16!44;CL:0000133!6.15e-16!44;CL:0000117!1.20e-15!23;CL:0000337!1.20e-15!23;CL:0000540!1.31e-15!33;CL:0000047!1.31e-15!33;CL:0000031!1.31e-15!33;CL:0000404!1.31e-15!33;CL:0002319!2.68e-15!43;CL:0000393!1.06e-11!39;CL:0000211!1.06e-11!39;CL:0000055!2.11e-11!50
|ontology_enrichment_celltype_v019_2=CL:0000117,2.45e-24,23;CL:0000337,2.45e-24,23;CL:0000540,7.09e-16,33;CL:0000047,7.09e-16,33;CL:0000031,7.09e-16,33;CL:0000404,7.09e-16,33;CL:0000221,1.42e-15,44;CL:0000133,1.42e-15,44;CL:0002319,1.08e-14,43;CL:0000393,3.88e-12,39;CL:0000211,3.88e-12,39
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!4.50e-34!73;UBERON:0005743!4.50e-34!73;UBERON:0000073!1.51e-33!75;UBERON:0001016!1.51e-33!75;UBERON:0004121!2.42e-31!102;UBERON:0000924!2.42e-31!102;UBERON:0006601!2.42e-31!102;UBERON:0002346!5.22e-31!71;UBERON:0003075!5.22e-31!71;UBERON:0007284!5.22e-31!71;UBERON:0001049!5.16e-27!52;UBERON:0005068!5.16e-27!52;UBERON:0006241!5.16e-27!52;UBERON:0007135!5.16e-27!52;UBERON:0000033!4.57e-26!63;UBERON:0000955!5.99e-25!50;UBERON:0006238!5.99e-25!50;UBERON:0002616!2.27e-24!49;UBERON:0003056!8.29e-23!49;UBERON:0003080!2.76e-21!40;UBERON:0002780!1.00e-20!39;UBERON:0001890!1.00e-20!39;UBERON:0006240!1.00e-20!39;UBERON:0002020!1.37e-20!34;UBERON:0002791!9.98e-17!29;UBERON:0003528!9.98e-17!29;UBERON:0001893!9.98e-17!29;UBERON:0007811!1.63e-13!86;UBERON:0000153!2.56e-13!94;UBERON:0000956!1.41e-11!21;UBERON:0001869!1.41e-11!21;UBERON:0000203!1.41e-11!21;UBERON:0002619!3.35e-09!17;UBERON:0000025!1.44e-07!114;UBERON:0002021!6.52e-07!10;UBERON:0000411!6.52e-07!10;UBERON:0001950!6.52e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.50e-41,54;UBERON:0001017,6.49e-41,73;UBERON:0001016,2.69e-39,75;UBERON:0001049,5.03e-39,52;UBERON:0005068,5.03e-39,52;UBERON:0006241,5.03e-39,52;UBERON:0007135,5.03e-39,52;UBERON:0002346,3.37e-36,64;UBERON:0003075,3.37e-36,64;UBERON:0007284,3.37e-36,64;UBERON:0004121,6.89e-35,95;UBERON:0000924,6.89e-35,95;UBERON:0006601,6.89e-35,95;UBERON:0010371,7.34e-33,73;UBERON:0000955,7.91e-33,47;UBERON:0006238,7.91e-33,47;UBERON:0002616,6.35e-32,46;UBERON:0002020,2.14e-30,34;UBERON:0003080,3.18e-30,40;UBERON:0003056,7.78e-30,49;UBERON:0002780,2.51e-29,39;UBERON:0001890,2.51e-29,39;UBERON:0006240,2.51e-29,39;UBERON:0010314,1.48e-25,92;UBERON:0003528,3.27e-24,29;UBERON:0002791,3.27e-24,29;UBERON:0001893,3.27e-24,29;UBERON:0000956,5.48e-16,21;UBERON:0001869,5.48e-16,21;UBERON:0000203,5.48e-16,21;UBERON:0002619,3.23e-12,17;UBERON:0002420,1.86e-09,8;UBERON:0007245,1.86e-09,8;UBERON:0010009,1.86e-09,8;UBERON:0010011,1.86e-09,8;UBERON:0000454,1.86e-09,8;UBERON:0000025,1.98e-09,114;UBERON:0004111,2.62e-09,122;UBERON:0002021,6.80e-09,10;UBERON:0000411,6.80e-09,10;UBERON:0001950,6.80e-09,10;UBERON:0003076,7.91e-09,12;UBERON:0003057,7.91e-09,12;UBERON:0002240,6.46e-08,6;UBERON:0005174,6.46e-08,6;UBERON:0001137,6.46e-08,6;UBERON:0001948,2.08e-07,5;UBERON:0002315,2.08e-07,5
|phase1_expression=4.00372117761985,0,0,0,0,0,0,0.129123323441576,0,0,0.171217968225505,0.159544317990673,0.171200729931206,0,0,0.404950534779652,0,0,0.137114433605739,0,1.78590909317247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.202753862439029,0,0,0.436050312760893,1.31811709640683,0.194429899074283,0.139986421625363,2.87505128729943,0,0,0,0,0,0,6.67644320836673,13.7537654610729,5.07065122804943,0,0,0,0,0,2.69640099466564,4.61061966385865,4.66603255388149,7.02030879324791,5.8890989178387,11.7116903605559,11.4851641294839,3.67472397644862,2.30029130443767,2.75765635983006,3.30347642998166,6.12899222808901,4.45458946443106,5.93488294785872,5.12330804173494,10.4182674111352,5.862842979029,5.6276261003168,10.0846843532695,16.4992007865254,14.8066548031067,9.69277118291563,0.075726193333184,0.377857800533928,0,0,0,0.539703191637817,0,0,0.280888840263504,0,0,0,6.05626705039726,0,0,0,0,0,0,0.22836775943812,0,0.29688427812965,1.21439728736295,0.913396434936424,2.99800146432876,1.20578112442098,0.940709657085638,0.628332956648377,0,0.144599356919912,0,0.161766849947409,0.220841518460394,0,0,4.09893115816166,5.23616767033638,0,0,0,0,3.89455662452539,3.66000482254901,9.04711335212624,4.69325664519146,5.8814555185976,5.61027720310812,7.30085683804909,0.407357455401265,0.124406970610093,0,0,0.780722657776222,0.689706313300419,0.720248519221397,2.86339153887859,1.36072998302656,2.43416068541215,1.87403449119458,2.06962696591213,0,0.567318240503458,1.58356011747554,0.876782929710299,1.66828349535359,0,0.411564272815887,0.199034266818493,0,0,0,0,0,0,0,0.196764231747404,0.617068451549513,0.232533944750408,0.268273401399619,0.116765342367169,0.16455984991348,0.820837320395476,0.243206428637567,0.146199987425332,0,0.134206418760372,3.36463917702604,7.61494131606705,0,0,0,0.696710015581316,0,0,0.444756087689741,0.190225626112559,0,0.329397909448022,0.251335208800269,0.795825888164603,0.19496408711912,0.898819408654221,0.216138049874694,0.199141273254367,0.189667900953082,0.571242563048644,0,0.407302655690628,0.775809948670503,0.280543279561274,0.0632365371242573,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0.324270453550071,0,0,0.372140947668503,0,0,0,0,0,0.37898282354097,0.488894929326078,0.509235257325564,0.469380496577004,0.167506257441816,0.238043640886014,0,0.315270288212382,0.221464689648775,0.318909537314974,0.163863314715738,0.172684981865896,0,0,0,0,0,3.05046120976805,5.50894926983355,0,0.252470927204373,0.631016438832513,0.780877488593277,0.430846795465598,0.477937595905104,0.445597348164788,0.283076530788832,0.809621403349789,0.292255857911312,0.395287777946524,3.85585579706168,0,0.712262414669021,0.488660878060728,0,0,0,0.302323556964751,0,0,0.307435147943927,0.258428293168221,0,0.356497378384721,0.316036757935816,0,0,1.02131881726136,2.16073312837572,1.03486947026204,1.07168517515796,0.886701168211368,1.42695054081656,3.62007845324666,3.34911444026059,0,0,0,0,0.161464426695906,0.120625849856312,0,0,0,2.03967832211561,0.170870880797853,0.206386867963223,0,0,0.136694227721025,0.228778173206523,0,0.139951452323658,0,0,0.316335993581135,0,1.18805874903981,0,0.218362563746178,0.404593039154462,0.661227645802687,0,0.388844919875379,0,0,0,0.165458490457098,0.972255941720238,1.03327858782185,0.506868376472335,0.469428954583016,0.39061315453185,0.209718688851422,0,0,0,0.405450430580328,0.102710957164827,0,0,0,0,0,0,0,0,0,0.0962118416403295,0.116876902181569,0,0,0,0,0,0,0,0,0,6.21227026878773,7.36520378411483,6.87474616127276,21.997207339992,3.42541259885321,0.755393897389701,5.40018000185445,5.40385443869065,4.53142408984205,5.1776031175182,0.62272408550506,0,2.04880326904961,0.486213434136588,1.25767897576789,1.83843508450014,0.222246727801615,1.03017528619447,0.320919209591815,1.26348605881899,0.25347929989024,0,1.40462261204824,1.08842759088278,1.26358031702349,0,1.0429589335037,1.35036454324594,0,1.17759136107518,1.02860775715625,1.24233064311536,1.66905332963125,1.30811774969096,1.12931256498397,0.846146078916765,0.548783918618318,1.05227884575137,2.17286582153379,0,1.06771516311757,1.67457620038458,0.409231043169689,1.23949472948773,0.964533054905707,0.249810577937946,0.935726433781634,0.214871054048298,0.382576664137687,0,0.695603506861264
|phase1_expression=4.00372117761985,0,0,0,0,0,0,0.129123323441576,0,0,0.171217968225505,0.159544317990673,0.171200729931206,0,0,0.404950534779652,0,0,0.137114433605739,0,1.78590909317247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.202753862439029,0,0,0.436050312760893,1.31811709640683,0.194429899074283,0.139986421625363,2.87505128729943,0,0,0,0,0,0,6.67644320836673,13.7537654610729,5.07065122804943,0,0,0,0,0,2.69640099466564,4.61061966385865,4.66603255388149,7.02030879324791,5.8890989178387,11.7116903605559,11.4851641294839,3.67472397644862,2.30029130443767,2.75765635983006,3.30347642998166,6.12899222808901,4.45458946443106,5.93488294785872,5.12330804173494,10.4182674111352,5.862842979029,5.6276261003168,10.0846843532695,16.4992007865254,14.8066548031067,9.69277118291563,0.075726193333184,0.377857800533928,0,0,0,0.539703191637817,0,0,0.280888840263504,0,0,0,6.05626705039726,0,0,0,0,0,0,0.22836775943812,0,0.29688427812965,1.21439728736295,0.913396434936424,2.99800146432876,1.20578112442098,0.940709657085638,0.628332956648377,0,0.144599356919912,0,0.161766849947409,0.220841518460394,0,0,4.09893115816166,5.23616767033638,0,0,0,0,3.89455662452539,3.66000482254901,9.04711335212624,4.69325664519146,5.8814555185976,5.61027720310812,7.30085683804909,0.407357455401265,0.124406970610093,0,0,0.780722657776222,0.689706313300419,0.720248519221397,2.86339153887859,1.36072998302656,2.43416068541215,1.87403449119458,2.06962696591213,0,0.567318240503458,1.58356011747554,0.876782929710299,1.66828349535359,0,0.411564272815887,0.199034266818493,0,0,0,0,0,0,0,0.196764231747404,0.617068451549513,0.232533944750408,0.268273401399619,0.116765342367169,0.16455984991348,0.820837320395476,0.243206428637567,0.146199987425332,0,0.134206418760372,3.36463917702604,7.61494131606705,0,0,0,0.696710015581316,0,0,0.444756087689741,0.190225626112559,0,0.329397909448022,0.251335208800269,0.795825888164603,0.19496408711912,0.898819408654221,0.216138049874694,0.199141273254367,0.189667900953082,0.571242563048644,0,0.407302655690628,0.775809948670503,0.280543279561274,0.0632365371242573,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0.324270453550071,0,0,0.372140947668503,0,0,0,0,0,0.37898282354097,0.488894929326078,0.509235257325564,0.469380496577004,0.167506257441816,0.238043640886014,0,0.315270288212382,0.221464689648775,0.318909537314974,0.163863314715738,0.172684981865896,0,0,0,0,0,3.05046120976805,5.50894926983355,0,0.252470927204373,0.631016438832513,0.780877488593277,0.430846795465598,0.477937595905104,0.445597348164788,0.283076530788832,0.809621403349789,0.292255857911312,0.395287777946524,3.85585579706168,0,0.712262414669021,0.488660878060728,0,0,0,0.302323556964751,0,0,0.307435147943927,0.258428293168221,0,0.356497378384721,0.316036757935816,0,0,1.02131881726136,2.16073312837572,1.03486947026204,1.07168517515796,0.886701168211368,1.42695054081656,3.62007845324666,3.34911444026059,0,0,0,0,0.161464426695906,0.120625849856312,0,0,0,2.03967832211561,0.170870880797853,0.206386867963223,0,0,0.136694227721025,0.228778173206523,0,0.139951452323658,0,0,0.316335993581135,0,1.18805874903981,0,0.218362563746178,0.404593039154462,0.661227645802687,0,0.388844919875379,0,0,0,0.165458490457098,0.972255941720238,1.03327858782185,0.506868376472335,0.469428954583016,0.39061315453185,0.209718688851422,0,0,0,0.405450430580328,0.102710957164827,0,0,0,0,0,0,0,0,0,0.0962118416403295,0.116876902181569,0,0,0,0,0,0,0,0,0,6.21227026878773,7.36520378411483,6.87474616127276,21.997207339992,3.42541259885321,0.755393897389701,5.40018000185445,5.40385443869065,4.53142408984205,5.1776031175182,0.62272408550506,0,2.04880326904961,0.486213434136588,1.25767897576789,1.83843508450014,0.222246727801615,1.03017528619447,0.320919209591815,1.26348605881899,0.25347929989024,0,1.40462261204824,1.08842759088278,1.26358031702349,0,1.0429589335037,1.35036454324594,0,1.17759136107518,1.02860775715625,1.24233064311536,1.66905332963125,1.30811774969096,1.12931256498397,0.846146078916765,0.548783918618318,1.05227884575137,2.17286582153379,0,1.06771516311757,1.67457620038458,0.409231043169689,1.23949472948773,0.964533054905707,0.249810577937946,0.935726433781634,0.214871054048298,0.382576664137687,0,0.695603506861264
|short_description=p@chrX:98516580..98516585,+
}}
}}

Latest revision as of 11:08, 6 August 2015

Short description:p@chrX:98516580..98516585, +
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_at_chrX:98516580..98516585, +
Coexpression cluster:MCL_coexpression_mm9:1329
Association with transcript: NA
EntrezGene:NA
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p@chrX:98516580..98516585+

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G74.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.16
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.40
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.79
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.25
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.20
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.32
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C36.68
Mouse Granule cells, donor2.CNhs12357.11731-123E313.75
Mouse Granule cells, donor3.CNhs12108.11636-122C75.07
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C82.70
Mouse Microglia, donor2.CNhs12634.11736-123E84.61
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D54.67
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F57.02
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D95.89
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F111.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D511.49
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D23.67
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.30
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F36.13
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D74.45
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D45.93
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F45.12
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D810.42
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E45.86
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E55.63
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I610.08
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D616.50
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F614.81
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E19.69
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.38
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G66.06
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C51.21
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I13.00
adrenal gland, embryo E18.CNhs11026.1262-18F51.21
adrenal gland, neonate N00.CNhs11191.1311-23C10.94
adrenal gland, neonate N25.CNhs11223.1377-27I30.63
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B24.10
cerebellum, neonate N30.CNhs11135.1395-42I25.24
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A43.89
corpus striatum, adult.CNhs10487.19-21D83.66
corpus striatum, neonate N00.CNhs11226.630-43F19.05
cortex, adult.CNhs10473.12-14D54.69
cortex, neonate N30.CNhs11107.1392-42F25.88
diencephalon, adult.CNhs10482.20-12F25.61
diencephalon, neonate N30.CNhs11201.1388-42B27.30
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.41
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.78
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C90.72
eyeball, embryo E17.CNhs11023.1261-18D42.86
eyeball, neonate N00.CNhs11207.633-15C61.36
eyeball, neonate N01.CNhs11140.1532-43E72.43
eyeball, neonate N02.CNhs11205.1551-44G81.87
eyeball, neonate N16.CNhs11188.777-19A22.07
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.57
forelimb, embryo E13.CNhs10589.384-1E21.58
forelimb, embryo E14.CNhs10577.413-26A80.88
forelimb, embryo E15.CNhs11007.437-20E71.67
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.62
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.82
heart, neonate N16.CNhs11209.782-15G10.24
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E83.36
hippocampus, neonate N00.CNhs11228.627-43G17.61
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.70
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.80
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.57
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.78
kidney, neonate N00.CNhs11214.646-21G70.28
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.32
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.49
lung, embryo E15.CNhs11020.432-17C50.51
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C23.05
medulla oblongata, neonate N30.CNhs11200.1396-42A35.51
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I93.86
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.71
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.02
pituitary gland, embryo E12.CNhs11018.346-16E62.16
pituitary gland, embryo E13.CNhs11009.370-44C71.03
pituitary gland, embryo E14.CNhs11037.398-44A51.07
pituitary gland, embryo E15.CNhs10592.427-16B90.89
pituitary gland, embryo E16.CNhs11036.449-43F61.43
pituitary gland, embryo E17.CNhs11039.1265-44F53.62
pituitary gland, neonate N00.CNhs11190.1308-22E93.35
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C92.04
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D41.19
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.66
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.39
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.97
testis, embryo E17.CNhs11029.486-18I51.03
testis, embryo E18.CNhs11027.503-18G50.51
testis, neonate N00.CNhs11189.1300-22B70.47
testis, neonate N07.CNhs11222.726-26I40.39
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A16.21
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A27.37
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A36.87
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D722.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A43.43
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A65.40
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A75.40
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.53
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A95.18
whole body, embryo E11.CNhs11014.324-5I80.62
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H22.05
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B11.26
whole body, embryo E16.CNhs10514.453-14F21.84
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.26
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.40
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.09
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.26
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.04
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.35
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.67
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.31
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.85
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.17
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.07
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.67
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.24
whole body, embryo E17.5.CNhs10513.490-9F90.96
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.94
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)2.45e-2423
neuroblast (sensu Vertebrata)2.45e-2423
neuron7.09e-1633
neuronal stem cell7.09e-1633
neuroblast7.09e-1633
electrically signaling cell7.09e-1633
ectodermal cell1.42e-1544
neurectodermal cell1.42e-1544
neural cell1.08e-1443
electrically responsive cell3.88e-1239
electrically active cell3.88e-1239

Uber anatomy
Ontology termp-valuen
regional part of nervous system2.50e-4154
central nervous system6.49e-4173
nervous system2.69e-3975
neural tube5.03e-3952
neural rod5.03e-3952
future spinal cord5.03e-3952
neural keel5.03e-3952
neurectoderm3.37e-3664
neural plate3.37e-3664
presumptive neural plate3.37e-3664
ectoderm-derived structure6.89e-3595
ectoderm6.89e-3595
presumptive ectoderm6.89e-3595
ecto-epithelium7.34e-3373
brain7.91e-3347
future brain7.91e-3347
regional part of brain6.35e-3246
gray matter2.14e-3034
anterior neural tube3.18e-3040
pre-chordal neural plate7.78e-3049
regional part of forebrain2.51e-2939
forebrain2.51e-2939
future forebrain2.51e-2939
structure with developmental contribution from neural crest1.48e-2592
brain grey matter3.27e-2429
regional part of telencephalon3.27e-2429
telencephalon3.27e-2429
cerebral cortex5.48e-1621
cerebral hemisphere5.48e-1621
pallium5.48e-1621
regional part of cerebral cortex3.23e-1217
basal ganglion1.86e-098
nuclear complex of neuraxis1.86e-098
aggregate regional part of brain1.86e-098
collection of basal ganglia1.86e-098
cerebral subcortex1.86e-098
tube1.98e-09114
anatomical conduit2.62e-09122
occipital lobe6.80e-0910
visual cortex6.80e-0910
neocortex6.80e-0910
posterior neural tube7.91e-0912
chordal neural plate7.91e-0912
spinal cord6.46e-086
dorsal region element6.46e-086
dorsum6.46e-086
regional part of spinal cord2.08e-075
gray matter of spinal cord2.08e-075
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