FFCP PHASE1:Mm9::chrX:83115605..83115636,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chrX:83115605..83115636,+
|short_description=p1@5430427O19Rik
|description=CAGE_peak_1_at_5430427O19Rik_5end
|association_with_transcript=0bp_to_NM_001163539,uc...") |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=71398 | |EntrezGene=71398 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1156 | |||
|TSSclassifier=NA | |||
|UniProt=Q08EG0,Q9D3J9 | |UniProt=Q08EG0,Q9D3J9 | ||
|association_with_transcript=0bp_to_NM_001163539,uc009tsa.2_5end | |||
|cluster_id=chrX:83115605..83115636,+ | |||
|description=CAGE_peak_1_at_5430427O19Rik_5end | |||
|id=chrX:83115605..83115636,+ | |||
|ontology_enrichment_celltype=CL:0000049!2.05e-08!19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000049,6.70e-17,19;CL:0000988,1.43e-14,32;CL:0002032,1.43e-14,32;CL:0000037,1.43e-14,32;CL:0000837,1.43e-14,32;CL:0000763,1.38e-12,16;CL:0002320,9.17e-11,46;CL:0000134,9.17e-11,46;CL:0000553,1.51e-09,6;CL:0000556,1.51e-09,6;CL:0000839,8.01e-09,13;CL:0002031,2.09e-08,25;CL:0000557,2.64e-08,7;CL:0000219,2.65e-08,54 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!9.83e-13!48;UBERON:0002390!2.73e-11!45;UBERON:0003061!2.73e-11!45;UBERON:0002371!6.06e-11!16;UBERON:0001474!1.56e-10!22;UBERON:0004765!1.56e-10!22;UBERON:0001434!1.56e-10!22;UBERON:0002405!2.00e-10!70;UBERON:0002204!1.15e-08!32;UBERON:0003081!7.31e-07!88 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.16e-17,48;UBERON:0002405,2.16e-17,48;UBERON:0002371,2.33e-17,16;UBERON:0002390,6.41e-16,45;UBERON:0003061,6.41e-16,45;UBERON:0001474,2.98e-15,22;UBERON:0004765,2.98e-15,22;UBERON:0001434,2.98e-15,22;UBERON:0002204,1.21e-13,32;UBERON:0002384,9.17e-11,46;UBERON:0002106,4.73e-08,6;UBERON:0004457,4.73e-08,6;UBERON:0000042,4.73e-08,6;UBERON:0004854,4.73e-08,6;UBERON:0009034,4.73e-08,6;UBERON:0002095,4.73e-08,6;UBERON:0004782,4.73e-08,6;UBERON:0003281,4.73e-08,6;UBERON:0009664,4.73e-08,6;UBERON:0002296,4.73e-08,6;UBERON:0005602,4.73e-08,6;UBERON:0001179,4.73e-08,6;UBERON:0006293,4.73e-08,6;UBERON:0003081,1.22e-07,87;UBERON:0000926,7.30e-07,120;UBERON:0004120,7.30e-07,120;UBERON:0006603,7.30e-07,120 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,2.99798785634096,5.06188168474565,1.39912375625629,24.6060488979425,25.3661702170617,20.3707032863054,0.595303031057488,19.8581902401771,29.7767759618386,1.27993938234725,0.91763712426868,0,0,0,0,0,0,0,0,0,0,0,0,10.8818223991596,6.2506827561904,7.32933241563318,9.41170380849623,14.3439551841274,8.25367600152961,0,0,0,0,0,0,0,0,0,22.8184344238521,0,2.01656279485478,0.257259436035947,0,0,0,0,0,0,0,0.899899717281399,6.92206453796882,2.8419204597844,0.599200221036809,1.53687322128622,0,0,0,0,0,0,0,0,0,0.255374676170375,0.307213066512487,0,0,0,0,0,0.30559649555362,0.294628585473668,0.284743361598206,0,0,0,0.289864488701678,0,0,0,0,0,0.983110940922263,0,0,0,0,0,0,0,0,0,0,1.02765491747154,21.4918443427153,1.63286352971307,0.346970653532272,0,0,0.150722640552623,0.23517741427141,0.125666591329675,0,1.3013942122792,3.5384422077995,0.161766849947409,0.883366073841574,1.93950101254089,1.86391761218122,0,0,0.510914110417183,26.4791425158084,14.9975682748352,24.0162729168092,0.299581278809645,0.457500602818626,0,0,0.255715457330331,0.20778804455956,0,0.305518091550949,2.23932547098167,0.505445516867349,0,0,0.229902104433473,0,0,0.0680364991513279,0.12811372028485,0,0.258703370739016,0,0.189106080167819,0,0,0,0,0.205782136407943,0,11.2354109970118,10.5512641917033,12.2190304740105,0,0,0.180062061461015,0,0,0,0,0,0,0.16455984991348,0.32833492815819,0.243206428637567,0.146199987425332,0.219550115291051,0.268412837520744,0.420579897128254,0,1.32167513193519,0.264450566663544,0.213288250535234,0,0.128867461322093,0,0.22237804384487,0,0.474529061544512,0,0.251335208800269,0.397912944082302,0.19496408711912,0,0.432276099749388,1.1948476395262,0,0,0,0,0.193952487167626,0.140271639780637,0.0632365371242573,0.295220295959204,0.31399745568275,0,1.1858105083486,0,0.589676985339609,0.224862112384854,0,0.72353147925725,0.50925170356284,0.863088412352432,0.810676133875177,0,0,1.11642284300551,0.624075346229121,0.252578877947112,0.358794827043824,0,2.03228509183265,0.189491411770485,0.162964976442026,0,0,0,0,0,0.630540576424764,0.664394068946325,0.478364305972461,1.96635977658886,2.24490476425664,2.02508682014116,36.1899081454253,25.5635671394793,0.983528546038072,0.827810238914197,0.160550589987792,0.234423373184406,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0.567760340833074,0.178065603667255,0.651547837414304,1.31976098378028,2.65490276679926,0.242780636154981,0.302323556964751,0,0,0,0.775284879504663,0,0,0,0,0,0,0.18006109403131,0,0.643011105094777,0,0.178368817602071,0.658196082408484,0,0.469343416127421,0,0.220528398054962,0.65954501176592,0,0.180938774784468,0,0.164140899745061,0.291480836629851,0.18542530201051,5.29699730473343,1.03193433981611,1.66675074632741,1.88368457004691,3.69074414846768,4.57556346413045,16.8278645693917,14.2750481370131,17.8277966207707,0,0,0.203319467126849,0.108005340821801,0.418176592028937,0.436725127492355,0.269728692769641,0.247960367176008,0,0.388844919875379,1.86401793926078,0,0,0,0,0,0.168956125490778,0.117357238645754,0,0.104859344425711,0.241584120826006,0,0.316011120628178,1.82452693761148,2.15693010046137,1.03936658382236,1.07416017400489,0.39736270956253,1.32214994471966,0.738447635872886,0.403865799792591,0.533447646584999,0.806609481094724,0.487289403698762,0.962118416403295,1.40252282617883,0.226730383615211,0,0,0,0.386379188064381,1.68914227906064,0.915758121336325,0,0.501572104035363,0,0,0,0.515559547031063,0,0,0,0,0,0.51776031175182,0.103787347584177,0.399024873401031,0,0.243106717068294,0.209613162627982,0,0.222246727801615,0.206035057238894,0,0,0,0,0.187283014939765,0.0640251524048693,0.17230640686684,0.476293691283074,0,0.192909220463705,0,0.441596760403192,0.342869252385415,0,0,0.290692833264657,0,0.0846146078916765,0,0,0,0,0,0.0985044823755635,0,0.309873682371932,0.385813221962283,0,0,0.214871054048298,0.382576664137687,0.441182838239031,0.463735671240843 | |phase1_expression=0.160148847104794,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,2.99798785634096,5.06188168474565,1.39912375625629,24.6060488979425,25.3661702170617,20.3707032863054,0.595303031057488,19.8581902401771,29.7767759618386,1.27993938234725,0.91763712426868,0,0,0,0,0,0,0,0,0,0,0,0,10.8818223991596,6.2506827561904,7.32933241563318,9.41170380849623,14.3439551841274,8.25367600152961,0,0,0,0,0,0,0,0,0,22.8184344238521,0,2.01656279485478,0.257259436035947,0,0,0,0,0,0,0,0.899899717281399,6.92206453796882,2.8419204597844,0.599200221036809,1.53687322128622,0,0,0,0,0,0,0,0,0,0.255374676170375,0.307213066512487,0,0,0,0,0,0.30559649555362,0.294628585473668,0.284743361598206,0,0,0,0.289864488701678,0,0,0,0,0,0.983110940922263,0,0,0,0,0,0,0,0,0,0,1.02765491747154,21.4918443427153,1.63286352971307,0.346970653532272,0,0,0.150722640552623,0.23517741427141,0.125666591329675,0,1.3013942122792,3.5384422077995,0.161766849947409,0.883366073841574,1.93950101254089,1.86391761218122,0,0,0.510914110417183,26.4791425158084,14.9975682748352,24.0162729168092,0.299581278809645,0.457500602818626,0,0,0.255715457330331,0.20778804455956,0,0.305518091550949,2.23932547098167,0.505445516867349,0,0,0.229902104433473,0,0,0.0680364991513279,0.12811372028485,0,0.258703370739016,0,0.189106080167819,0,0,0,0,0.205782136407943,0,11.2354109970118,10.5512641917033,12.2190304740105,0,0,0.180062061461015,0,0,0,0,0,0,0.16455984991348,0.32833492815819,0.243206428637567,0.146199987425332,0.219550115291051,0.268412837520744,0.420579897128254,0,1.32167513193519,0.264450566663544,0.213288250535234,0,0.128867461322093,0,0.22237804384487,0,0.474529061544512,0,0.251335208800269,0.397912944082302,0.19496408711912,0,0.432276099749388,1.1948476395262,0,0,0,0,0.193952487167626,0.140271639780637,0.0632365371242573,0.295220295959204,0.31399745568275,0,1.1858105083486,0,0.589676985339609,0.224862112384854,0,0.72353147925725,0.50925170356284,0.863088412352432,0.810676133875177,0,0,1.11642284300551,0.624075346229121,0.252578877947112,0.358794827043824,0,2.03228509183265,0.189491411770485,0.162964976442026,0,0,0,0,0,0.630540576424764,0.664394068946325,0.478364305972461,1.96635977658886,2.24490476425664,2.02508682014116,36.1899081454253,25.5635671394793,0.983528546038072,0.827810238914197,0.160550589987792,0.234423373184406,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0.567760340833074,0.178065603667255,0.651547837414304,1.31976098378028,2.65490276679926,0.242780636154981,0.302323556964751,0,0,0,0.775284879504663,0,0,0,0,0,0,0.18006109403131,0,0.643011105094777,0,0.178368817602071,0.658196082408484,0,0.469343416127421,0,0.220528398054962,0.65954501176592,0,0.180938774784468,0,0.164140899745061,0.291480836629851,0.18542530201051,5.29699730473343,1.03193433981611,1.66675074632741,1.88368457004691,3.69074414846768,4.57556346413045,16.8278645693917,14.2750481370131,17.8277966207707,0,0,0.203319467126849,0.108005340821801,0.418176592028937,0.436725127492355,0.269728692769641,0.247960367176008,0,0.388844919875379,1.86401793926078,0,0,0,0,0,0.168956125490778,0.117357238645754,0,0.104859344425711,0.241584120826006,0,0.316011120628178,1.82452693761148,2.15693010046137,1.03936658382236,1.07416017400489,0.39736270956253,1.32214994471966,0.738447635872886,0.403865799792591,0.533447646584999,0.806609481094724,0.487289403698762,0.962118416403295,1.40252282617883,0.226730383615211,0,0,0,0.386379188064381,1.68914227906064,0.915758121336325,0,0.501572104035363,0,0,0,0.515559547031063,0,0,0,0,0,0.51776031175182,0.103787347584177,0.399024873401031,0,0.243106717068294,0.209613162627982,0,0.222246727801615,0.206035057238894,0,0,0,0,0.187283014939765,0.0640251524048693,0.17230640686684,0.476293691283074,0,0.192909220463705,0,0.441596760403192,0.342869252385415,0,0,0.290692833264657,0,0.0846146078916765,0,0,0,0,0,0.0985044823755635,0,0.309873682371932,0.385813221962283,0,0,0.214871054048298,0.382576664137687,0.441182838239031,0.463735671240843 | ||
|short_description=p1@5430427O19Rik | |||
}} | }} |
Latest revision as of 00:43, 2 October 2015
Short description: | p1@5430427O19Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_5430427O19Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:1156 |
Association with transcript: | 0bp_to_NM_001163539, uc009tsa.2_5end |
EntrezGene: | 5430427O19Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
common myeloid progenitor | 6.70e-17 | 19 |
hematopoietic cell | 1.43e-14 | 32 |
hematopoietic oligopotent progenitor cell | 1.43e-14 | 32 |
hematopoietic stem cell | 1.43e-14 | 32 |
hematopoietic multipotent progenitor cell | 1.43e-14 | 32 |
myeloid cell | 1.38e-12 | 16 |
connective tissue cell | 9.17e-11 | 46 |
mesenchymal cell | 9.17e-11 | 46 |
megakaryocyte progenitor cell | 1.51e-09 | 6 |
megakaryocyte | 1.51e-09 | 6 |
myeloid lineage restricted progenitor cell | 8.01e-09 | 13 |
hematopoietic lineage restricted progenitor cell | 2.09e-08 | 25 |
granulocyte monocyte progenitor cell | 2.64e-08 | 7 |
motile cell | 2.65e-08 | 54 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 2.16e-17 | 48 |
immune system | 2.16e-17 | 48 |
bone marrow | 2.33e-17 | 16 |
hematopoietic system | 6.41e-16 | 45 |
blood island | 6.41e-16 | 45 |
bone element | 2.98e-15 | 22 |
skeletal element | 2.98e-15 | 22 |
skeletal system | 2.98e-15 | 22 |
musculoskeletal system | 1.21e-13 | 32 |
connective tissue | 9.17e-11 | 46 |
spleen | 4.73e-08 | 6 |
cavity lining | 4.73e-08 | 6 |
serous membrane | 4.73e-08 | 6 |
gastrointestinal system mesentery | 4.73e-08 | 6 |
stomach region | 4.73e-08 | 6 |
mesentery | 4.73e-08 | 6 |
gastrointestinal system serosa | 4.73e-08 | 6 |
mesentery of stomach | 4.73e-08 | 6 |
gut mesentery | 4.73e-08 | 6 |
dorsal mesentery | 4.73e-08 | 6 |
dorsal mesogastrium | 4.73e-08 | 6 |
peritoneal cavity | 4.73e-08 | 6 |
spleen primordium | 4.73e-08 | 6 |
lateral plate mesoderm | 1.22e-07 | 87 |
mesoderm | 7.30e-07 | 120 |
mesoderm-derived structure | 7.30e-07 | 120 |
presumptive mesoderm | 7.30e-07 | 120 |